RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 SMIM22K7EJ46 135 aa13.23□□□□□ -0.29
PTPN13-207ENST00000508063 RAD21O60216 631 aa13.23□□□□□ -0.29
PTPN13-207ENST00000508063 SLC3A2P08195 630 aaKnown RBP13.23□□□□□ -0.29
PTPN13-207ENST00000508063 ERCC3P19447 782 aa13.23□□□□□ -0.29
PTPN13-207ENST00000508063 ADORA2AP29274 412 aa13.23□□□□□ -0.29
PTPN13-207ENST00000508063 CCND3P30281 292 aaPredicted RBP13.23□□□□□ -0.29
PTPN13-207ENST00000508063 KIAA1755Q5JYT7 1200 aa13.23□□□□□ -0.29
PTPN13-207ENST00000508063 ANKRD45Q5TZF3 282 aa13.23□□□□□ -0.29
PTPN13-207ENST00000508063 NCAPG2Q86XI2 1143 aa13.23□□□□□ -0.29
PTPN13-207ENST00000508063 DIS3LQ8TF46 1054 aaKnown RBP13.23□□□□□ -0.29
PTPN13-207ENST00000508063 ATG4CQ96DT6 458 aa13.23□□□□□ -0.29
PTPN13-207ENST00000508063 NYAP2Q9P242 653 aa13.23□□□□□ -0.29
PTPN13-207ENST00000508063 RLFQ13129 1914 aa13.23□□□□□ -0.29
PTPN13-207ENST00000508063 M0R2C6 588 aa13.22□□□□□ -0.29
PTPN13-207ENST00000508063 FCER1AP12319 257 aa13.22□□□□□ -0.29
PTPN13-207ENST00000508063 RASA1P20936 1047 aa13.22□□□□□ -0.29
PTPN13-207ENST00000508063 COPB2P35606 906 aa13.22□□□□□ -0.29
PTPN13-207ENST00000508063 HDAC1Q13547 482 aaPredicted RBP13.22□□□□□ -0.29
PTPN13-207ENST00000508063 OLFML2BQ68BL8 750 aa13.22□□□□□ -0.29
PTPN13-207ENST00000508063 LHX8Q68G74 356 aa13.22□□□□□ -0.29
PTPN13-207ENST00000508063 IFNL3Q8IZI9 196 aa13.22□□□□□ -0.29
PTPN13-207ENST00000508063 NPLOC4Q8TAT6 608 aa13.22□□□□□ -0.29
PTPN13-207ENST00000508063 CRBNQ96SW2 442 aa13.22□□□□□ -0.29
PTPN13-207ENST00000508063 SYNPO2Q9UMS6 1093 aa13.22□□□□□ -0.29
PTPN13-207ENST00000508063 CNGA1P29973 690 aa13.21□□□□□ -0.29
PTPN13-207ENST00000508063 FXR1P51114 621 aaKnown RBP eCLIP13.21□□□□□ -0.29
PTPN13-207ENST00000508063 PDE4BQ07343 736 aa13.21□□□□□ -0.29
PTPN13-207ENST00000508063 ZMYM1Q5SVZ6 1142 aa13.21□□□□□ -0.29
PTPN13-207ENST00000508063 STK11IPQ8N1F8 1099 aa13.21□□□□□ -0.29
PTPN13-207ENST00000508063 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.21□□□□□ -0.29
PTPN13-207ENST00000508063 NAPBQ9H115 298 aa13.21□□□□□ -0.29
PTPN13-207ENST00000508063 EPB41L4AQ9HCS5 686 aaPredicted RBP13.21□□□□□ -0.29
PTPN13-207ENST00000508063 FLRT1Q9NZU1 646 aa13.21□□□□□ -0.29
PTPN13-207ENST00000508063 DDX20Q9UHI6 824 aaKnown RBP13.21□□□□□ -0.29
PTPN13-207ENST00000508063 PPP1R9AQ9ULJ8 1098 aa13.21□□□□□ -0.29
PTPN13-207ENST00000508063 ADAMTS5Q9UNA0 930 aa13.21□□□□□ -0.29
PTPN13-207ENST00000508063 GREB1LQ9C091 1923 aaPredicted RBP13.21□□□□□ -0.3
PTPN13-207ENST00000508063 PARP14Q460N5 1801 aa13.2□□□□□ -0.3
PTPN13-207ENST00000508063 A0A1W2PPC1 479 aa13.2□□□□□ -0.3
PTPN13-207ENST00000508063 F5H6K3 240 aa13.2□□□□□ -0.3
PTPN13-207ENST00000508063 CYP2C19P33261 490 aa13.2□□□□□ -0.3
PTPN13-207ENST00000508063 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
PTPN13-207ENST00000508063 KLRC3Q07444 240 aa13.2□□□□□ -0.3
PTPN13-207ENST00000508063 TMEM132BQ14DG7 1078 aa13.2□□□□□ -0.3
PTPN13-207ENST00000508063 PPP4R3BQ5MIZ7 849 aa13.2□□□□□ -0.3
PTPN13-207ENST00000508063 FAM83BQ5T0W9 1011 aa13.2□□□□□ -0.3
PTPN13-207ENST00000508063 RIOX2Q8IUF8 465 aa13.2□□□□□ -0.3
PTPN13-207ENST00000508063 C7orf61Q8IZ16 206 aa13.2□□□□□ -0.3
PTPN13-207ENST00000508063 OTUD7AQ8TE49 926 aaPredicted RBP13.2□□□□□ -0.3
PTPN13-207ENST00000508063 EVI5LQ96CN4 794 aa13.2□□□□□ -0.3
PTPN13-207ENST00000508063 RBM27Q9P2N5 1060 aaKnown RBP13.2□□□□□ -0.3
PTPN13-207ENST00000508063 CLIP2Q9UDT6 1046 aa13.2□□□□□ -0.3
PTPN13-207ENST00000508063 VWA5AO00534 786 aa13.19□□□□□ -0.3
PTPN13-207ENST00000508063 TTLL1O95922 423 aa13.19□□□□□ -0.3
PTPN13-207ENST00000508063 TSPY3P0CV98 308 aa13.19□□□□□ -0.3
PTPN13-207ENST00000508063 TSPY8P0CW00 308 aa13.19□□□□□ -0.3
PTPN13-207ENST00000508063 STAT3P40763 770 aa13.19□□□□□ -0.3
PTPN13-207ENST00000508063 KCTD2Q14681 263 aa13.19□□□□□ -0.3
PTPN13-207ENST00000508063 TICAM2Q86XR7 235 aa13.19□□□□□ -0.3
PTPN13-207ENST00000508063 PRPF38AQ8NAV1 312 aaKnown RBP13.19□□□□□ -0.3
PTPN13-207ENST00000508063 MKL1Q969V6 931 aa13.19□□□□□ -0.3
PTPN13-207ENST00000508063 MMP19Q99542 508 aa13.19□□□□□ -0.3
PTPN13-207ENST00000508063 SLF1Q9BQI6 1058 aa13.19□□□□□ -0.3
PTPN13-207ENST00000508063 FBXO28Q9NVF7 368 aa13.19□□□□□ -0.3
PTPN13-207ENST00000508063 STAP2Q9UGK3 403 aa13.19□□□□□ -0.3
PTPN13-207ENST00000508063 CTDP1Q9Y5B0 961 aaPredicted RBP13.19□□□□□ -0.3
PTPN13-207ENST00000508063 CEP290O15078 2479 aa13.19□□□□□ -0.3
PTPN13-207ENST00000508063 COL11A1P12107 1806 aaPredicted RBP13.18□□□□□ -0.3
PTPN13-207ENST00000508063 FRMPD3Q5JV73 1810 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 SALL3Q9BXA9 1300 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 ALPK3Q96L96 1907 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 MYH4Q9Y623 1939 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 IGKV6D-41A0A0C4DH26 115 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 COBLO75128 1261 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 NDUFB10O96000 172 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 COL6A1P12109 1028 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 CYBAP13498 195 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 PPARAQ07869 468 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 ARRDC4Q8NCT1 418 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 NEDD1Q8NHV4 660 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 MAML3Q96JK9 1138 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 YTHDC1Q96MU7 727 aaKnown RBP13.18□□□□□ -0.3
PTPN13-207ENST00000508063 SEC62Q99442 399 aaKnown RBP13.18□□□□□ -0.3
PTPN13-207ENST00000508063 PRO3102Q9H379 93 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 MTMR4Q9NYA4 1195 aa13.18□□□□□ -0.3
PTPN13-207ENST00000508063 ZNF214Q9UL59 606 aaPredicted RBP13.18□□□□□ -0.3
PTPN13-207ENST00000508063 DIS3Q9Y2L1 958 aaKnown RBP13.18□□□□□ -0.3
PTPN13-207ENST00000508063 PFASO15067 1338 aa13.17□□□□□ -0.3
PTPN13-207ENST00000508063 DNM1LO00429 736 aa13.17□□□□□ -0.3
PTPN13-207ENST00000508063 SEPT4O43236 478 aa13.17□□□□□ -0.3
PTPN13-207ENST00000508063 ZBED4O75132 1171 aa13.17□□□□□ -0.3
PTPN13-207ENST00000508063 PRDM1O75626 825 aa13.17□□□□□ -0.3
PTPN13-207ENST00000508063 IGHA2P01877 340 aa13.17□□□□□ -0.3
PTPN13-207ENST00000508063 PDE1AP54750 535 aa13.17□□□□□ -0.3
PTPN13-207ENST00000508063 GMCL1P1Q8NEA9 526 aa13.17□□□□□ -0.3
PTPN13-207ENST00000508063 CEP95Q96GE4 821 aa13.17□□□□□ -0.3
PTPN13-207ENST00000508063 TEX13BQ9BXU2 312 aa13.17□□□□□ -0.3
PTPN13-207ENST00000508063 RWDD1Q9H446 243 aaPredicted RBP13.17□□□□□ -0.3
PTPN13-207ENST00000508063 HELLSQ9NRZ9 838 aa13.17□□□□□ -0.3
PTPN13-207ENST00000508063 NRBP1Q9UHY1 535 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms