RNA–Protein interactions for RNA: ENST00000508044.1

RACK1-218, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-218ENST00000508044 CHRDL2Q6WN34 429 aa12.65□□□□□ -0.38
RACK1-218ENST00000508044 ANKLE1Q8NAG6 615 aa12.65□□□□□ -0.38
RACK1-218ENST00000508044 NPLOC4Q8TAT6 608 aa12.65□□□□□ -0.38
RACK1-218ENST00000508044 SPATC1LQ9H0A9 340 aa12.65□□□□□ -0.38
RACK1-218ENST00000508044 KANSL2Q9H9L4 492 aa12.65□□□□□ -0.38
RACK1-218ENST00000508044 FBXO28Q9NVF7 368 aa12.65□□□□□ -0.38
RACK1-218ENST00000508044 HOXC10Q9NYD6 342 aa12.65□□□□□ -0.38
RACK1-218ENST00000508044 PLXNA1Q9UIW2 1896 aa12.64□□□□□ -0.39
RACK1-218ENST00000508044 PRDM1O75626 825 aa12.64□□□□□ -0.39
RACK1-218ENST00000508044 CAPN2P17655 700 aa12.64□□□□□ -0.39
RACK1-218ENST00000508044 GNAT2P19087 354 aa12.64□□□□□ -0.39
RACK1-218ENST00000508044 ERCC3P19447 782 aa12.64□□□□□ -0.39
RACK1-218ENST00000508044 HDAC1Q13547 482 aaPredicted RBP12.64□□□□□ -0.39
RACK1-218ENST00000508044 NBR1Q14596 966 aa12.64□□□□□ -0.39
RACK1-218ENST00000508044 LRRFIP1Q32MZ4 808 aaKnown RBP12.64□□□□□ -0.39
RACK1-218ENST00000508044 ZMYM1Q5SVZ6 1142 aa12.64□□□□□ -0.39
RACK1-218ENST00000508044 FAM83BQ5T0W9 1011 aa12.64□□□□□ -0.39
RACK1-218ENST00000508044 NECAB2Q7Z6G3 386 aa12.64□□□□□ -0.39
RACK1-218ENST00000508044 IFNL3Q8IZI9 196 aa12.64□□□□□ -0.39
RACK1-218ENST00000508044 HS6ST3Q8IZP7 471 aa12.64□□□□□ -0.39
RACK1-218ENST00000508044 MKNK2Q9HBH9 465 aa12.64□□□□□ -0.39
RACK1-218ENST00000508044 GOPCQ9HD26 462 aa12.64□□□□□ -0.39
RACK1-218ENST00000508044 OGDHLQ9ULD0 1010 aa12.64□□□□□ -0.39
RACK1-218ENST00000508044 PATL2C9JE40 543 aaKnown RBP12.63□□□□□ -0.39
RACK1-218ENST00000508044 EVI5O60447 810 aa12.63□□□□□ -0.39
RACK1-218ENST00000508044 HOXC6P09630 235 aa12.63□□□□□ -0.39
RACK1-218ENST00000508044 ADORA2AP29274 412 aa12.63□□□□□ -0.39
RACK1-218ENST00000508044 CYP2C19P33261 490 aa12.63□□□□□ -0.39
RACK1-218ENST00000508044 LHX8Q68G74 356 aa12.63□□□□□ -0.39
RACK1-218ENST00000508044 CCDC129Q6ZRS4 1044 aa12.63□□□□□ -0.39
RACK1-218ENST00000508044 NCAPG2Q86XI2 1143 aa12.63□□□□□ -0.39
RACK1-218ENST00000508044 MB21D1Q8N884 522 aa12.63□□□□□ -0.39
RACK1-218ENST00000508044 SHCBP1Q8NEM2 672 aa12.63□□□□□ -0.39
RACK1-218ENST00000508044 EXOC6Q8TAG9 804 aa12.63□□□□□ -0.39
RACK1-218ENST00000508044 NUP88Q99567 741 aaPredicted RBP12.63□□□□□ -0.39
RACK1-218ENST00000508044 NBPF3Q9H094 633 aa12.63□□□□□ -0.39
RACK1-218ENST00000508044 NR2E3Q9Y5X4 410 aa12.63□□□□□ -0.39
RACK1-218ENST00000508044 IGKV6D-41A0A0C4DH26 115 aa12.62□□□□□ -0.39
RACK1-218ENST00000508044 FXR1P51114 621 aaKnown RBP eCLIP12.62□□□□□ -0.39
RACK1-218ENST00000508044 TMEM132BQ14DG7 1078 aa12.62□□□□□ -0.39
RACK1-218ENST00000508044 MFSD14CQ5VZR4 134 aa12.62□□□□□ -0.39
RACK1-218ENST00000508044 DPP9Q86TI2 863 aa12.62□□□□□ -0.39
RACK1-218ENST00000508044 C11orf49Q9H6J7 331 aa12.62□□□□□ -0.39
RACK1-218ENST00000508044 PFASO15067 1338 aa12.62□□□□□ -0.39
RACK1-218ENST00000508044 FOXP2O15409 715 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 COBLO75128 1261 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 PDE1AP54750 535 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 PPARAQ07869 468 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 C7orf61Q8IZ16 206 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 ZNF444Q8N0Y2 327 aaPredicted RBP12.61□□□□□ -0.39
RACK1-218ENST00000508044 TRPV1Q8NER1 839 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 CEP95Q96GE4 821 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 NACAP1Q9BZK3 213 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 LNPKQ9C0E8 428 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 NAPBQ9H115 298 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 MROH8Q9H579 483 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 NYAP2Q9P242 653 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 RBM27Q9P2N5 1060 aaKnown RBP12.61□□□□□ -0.39
RACK1-218ENST00000508044 CLIP2Q9UDT6 1046 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 PPP1R9AQ9ULJ8 1098 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 ADAMTS5Q9UNA0 930 aa12.61□□□□□ -0.39
RACK1-218ENST00000508044 F5H6K3 240 aa12.6□□□□□ -0.39
RACK1-218ENST00000508044 VWA5AO00534 786 aa12.6□□□□□ -0.39
RACK1-218ENST00000508044 STRNO43815 780 aa12.6□□□□□ -0.39
RACK1-218ENST00000508044 NDUFB10O96000 172 aa12.6□□□□□ -0.39
RACK1-218ENST00000508044 IGHA2P01877 340 aa12.6□□□□□ -0.39
RACK1-218ENST00000508044 CYBAP13498 195 aa12.6□□□□□ -0.39
RACK1-218ENST00000508044 CNGA1P29973 690 aa12.6□□□□□ -0.39
RACK1-218ENST00000508044 KLRC3Q07444 240 aa12.6□□□□□ -0.39
RACK1-218ENST00000508044 FAM47AQ5JRC9 791 aa12.6□□□□□ -0.39
RACK1-218ENST00000508044 VPS53Q5VIR6 699 aa12.6□□□□□ -0.39
RACK1-218ENST00000508044 LRRC47Q8N1G4 583 aaKnown RBP12.6□□□□□ -0.39
RACK1-218ENST00000508044 REPS2Q8NFH8 660 aa12.6□□□□□ -0.39
RACK1-218ENST00000508044 ZNF287Q9HBT7 754 aa12.6□□□□□ -0.39
RACK1-218ENST00000508044 PCDH10Q9P2E7 1040 aa12.6□□□□□ -0.39
RACK1-218ENST00000508044 STAP2Q9UGK3 403 aa12.6□□□□□ -0.39
RACK1-218ENST00000508044 DDX20Q9UHI6 824 aaKnown RBP12.6□□□□□ -0.39
RACK1-218ENST00000508044 ZNF214Q9UL59 606 aaPredicted RBP12.6□□□□□ -0.39
RACK1-218ENST00000508044 RANBP2P49792 3224 aaKnown RBP12.6□□□□□ -0.39
RACK1-218ENST00000508044 PLIN4Q96Q06 1357 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 IGHDP01880 384 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 TSPY3P0CV98 308 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 TSPY8P0CW00 308 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 COL6A1P12109 1028 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 CTDSPL2Q05D32 466 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 PDE4BQ07343 736 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 AAMPQ13685 434 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 OLFML2BQ68BL8 750 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 B4GALNT3Q6L9W6 998 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 RIOX2Q8IUF8 465 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 EVI5LQ96CN4 794 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 SLF1Q9BQI6 1058 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 PRO3102Q9H379 93 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 MTMR4Q9NYA4 1195 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 ZMYND8Q9ULU4 1186 aaPredicted RBP12.59□□□□□ -0.39
RACK1-218ENST00000508044 SUPT16HQ9Y5B9 1047 aaKnown RBP12.59□□□□□ -0.39
RACK1-218ENST00000508044 TRIOBPQ9H2D6 2365 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 SMCHD1A6NHR9 2005 aa12.59□□□□□ -0.39
RACK1-218ENST00000508044 SZT2Q5T011 3432 aa12.58□□□□□ -0.4
RACK1-218ENST00000508044 A0A0D9SFI3 127 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms