RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 ELP3Q9H9T3 547 aa20.27■□□□□ 0.84
RNF4-209ENST00000507784 VAT1LQ9HCJ6 419 aa20.27■□□□□ 0.84
RNF4-209ENST00000507784 SYNPO2Q9UMS6 1093 aa20.27■□□□□ 0.84
RNF4-209ENST00000507784 UTRNP46939 3433 aa20.26■□□□□ 0.83
RNF4-209ENST00000507784 SNHG28P0DPA3 235 aa20.26■□□□□ 0.83
RNF4-209ENST00000507784 FDPSP14324 419 aaKnown RBP20.26■□□□□ 0.83
RNF4-209ENST00000507784 SPP2Q13103 211 aa20.26■□□□□ 0.83
RNF4-209ENST00000507784 NBPF11Q86T75 865 aa20.26■□□□□ 0.83
RNF4-209ENST00000507784 NUP88Q99567 741 aaPredicted RBP20.26■□□□□ 0.83
RNF4-209ENST00000507784 CPVLQ9H3G5 476 aa20.26■□□□□ 0.83
RNF4-209ENST00000507784 VCPKMTQ9H867 229 aa20.26■□□□□ 0.83
RNF4-209ENST00000507784 CIZ1Q9ULV3 898 aaPredicted RBP20.26■□□□□ 0.83
RNF4-209ENST00000507784 SNCAIPQ9Y6H5 919 aa20.26■□□□□ 0.83
RNF4-209ENST00000507784 V9GY48 417 aaPredicted RBP20.26■□□□□ 0.83
RNF4-209ENST00000507784 hCG_1642624A0A1W2PR95 340 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 USP17L10C9JJH3 530 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 PRPF3O43395 683 aaKnown RBP20.25■□□□□ 0.83
RNF4-209ENST00000507784 CELF2O95319 508 aaKnown RBP20.25■□□□□ 0.83
RNF4-209ENST00000507784 BMP3P12645 472 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 PDCP20941 246 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 DDIT3P35638 169 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 NUCB2P80303 420 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 IKQ13123 557 aaPredicted RBP20.25■□□□□ 0.83
RNF4-209ENST00000507784 GPATCH4Q5T3I0 446 aaKnown RBP20.25■□□□□ 0.83
RNF4-209ENST00000507784 FOXD4L5Q5VV16 416 aaPredicted RBP20.25■□□□□ 0.83
RNF4-209ENST00000507784 TTBK2Q6IQ55 1244 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 C2orf69Q8N8R5 385 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 ZNF280CQ8ND82 737 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 FOXD4L4Q8WXT5 416 aaPredicted RBP20.25■□□□□ 0.83
RNF4-209ENST00000507784 WASF1Q92558 559 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 GMCL1Q96IK5 515 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 ALG1Q9BT22 464 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 WDR18Q9BV38 432 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 RNF26Q9BY78 433 aaPredicted RBP20.25■□□□□ 0.83
RNF4-209ENST00000507784 CNTNAP5Q8WYK1 1306 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 STK36Q9NRP7 1315 aa20.25■□□□□ 0.83
RNF4-209ENST00000507784 VPS37CA5D8V6 355 aaPredicted RBP20.24■□□□□ 0.83
RNF4-209ENST00000507784 TRIM75PA6NK02 468 aa20.24■□□□□ 0.83
RNF4-209ENST00000507784 H3BQV1 296 aa20.24■□□□□ 0.83
RNF4-209ENST00000507784 DEXIO95424 95 aa20.24■□□□□ 0.83
RNF4-209ENST00000507784 SYT1P21579 422 aa20.24■□□□□ 0.83
RNF4-209ENST00000507784 SLC16A2P36021 539 aa20.24■□□□□ 0.83
RNF4-209ENST00000507784 USP14P54578 494 aa20.24■□□□□ 0.83
RNF4-209ENST00000507784 MTMR2Q13614 643 aa20.24■□□□□ 0.83
RNF4-209ENST00000507784 MAP3K11Q16584 847 aa20.24■□□□□ 0.83
RNF4-209ENST00000507784 KIAA1755Q5JYT7 1200 aa20.24■□□□□ 0.83
RNF4-209ENST00000507784 IFFO2Q5TF58 517 aa20.24■□□□□ 0.83
RNF4-209ENST00000507784 CLMNQ96JQ2 1002 aa20.24■□□□□ 0.83
RNF4-209ENST00000507784 KIAA1683Q9H0B3 1180 aa20.24■□□□□ 0.83
RNF4-209ENST00000507784 GBA2Q9HCG7 927 aaPredicted RBP20.24■□□□□ 0.83
RNF4-209ENST00000507784 PHIPQ8WWQ0 1821 aa20.24■□□□□ 0.83
RNF4-209ENST00000507784 TMEM232C9JQI7 657 aa20.23■□□□□ 0.83
RNF4-209ENST00000507784 STX6O43752 255 aa20.23■□□□□ 0.83
RNF4-209ENST00000507784 FUT2Q10981 343 aa20.23■□□□□ 0.83
RNF4-209ENST00000507784 FAM83BQ5T0W9 1011 aa20.23■□□□□ 0.83
RNF4-209ENST00000507784 C8orf76Q96K31 380 aa20.23■□□□□ 0.83
RNF4-209ENST00000507784 BAZ2BQ9UIF8 2168 aaKnown RBP20.22■□□□□ 0.83
RNF4-209ENST00000507784 TRPM7Q96QT4 1865 aa20.22■□□□□ 0.83
RNF4-209ENST00000507784 PAPPA2Q9BXP8 1791 aa20.22■□□□□ 0.83
RNF4-209ENST00000507784 ITGBL1O95965 494 aaPredicted RBP20.22■□□□□ 0.83
RNF4-209ENST00000507784 GUCY1B3Q02153 619 aa20.22■□□□□ 0.83
RNF4-209ENST00000507784 PKP1Q13835 747 aa20.22■□□□□ 0.83
RNF4-209ENST00000507784 TRIM29Q14134 588 aa20.22■□□□□ 0.83
RNF4-209ENST00000507784 SAMD1Q6SPF0 538 aaPredicted RBP20.22■□□□□ 0.83
RNF4-209ENST00000507784 CNKSR2Q8WXI2 1034 aa20.22■□□□□ 0.83
RNF4-209ENST00000507784 SLC10A4Q96EP9 437 aa20.22■□□□□ 0.83
RNF4-209ENST00000507784 RRP36Q96EU6 259 aaKnown RBP20.22■□□□□ 0.83
RNF4-209ENST00000507784 AIFM3Q96NN9 605 aa20.22■□□□□ 0.83
RNF4-209ENST00000507784 SPZ1Q9BXG8 430 aa20.22■□□□□ 0.83
RNF4-209ENST00000507784 C19orf81C9J6K1 198 aa20.21■□□□□ 0.83
RNF4-209ENST00000507784 SMARCA1P28370 1054 aa20.21■□□□□ 0.83
RNF4-209ENST00000507784 BACE1P56817 501 aa20.21■□□□□ 0.83
RNF4-209ENST00000507784 DGKZQ13574 1117 aa20.21■□□□□ 0.83
RNF4-209ENST00000507784 ERO1BQ86YB8 467 aa20.21■□□□□ 0.83
RNF4-209ENST00000507784 HOMER1Q86YM7 354 aa20.21■□□□□ 0.83
RNF4-209ENST00000507784 OTUD5Q96G74 571 aa20.21■□□□□ 0.83
RNF4-209ENST00000507784 TMOD4Q9NZQ9 345 aa20.21■□□□□ 0.83
RNF4-209ENST00000507784 RBM27Q9P2N5 1060 aaKnown RBP20.21■□□□□ 0.83
RNF4-209ENST00000507784 AFG3L2Q9Y4W6 797 aa20.21■□□□□ 0.83
RNF4-209ENST00000507784 WDR33Q9C0J8 1336 aaKnown RBP20.21■□□□□ 0.83
RNF4-209ENST00000507784 KIF3CO14782 793 aa20.2■□□□□ 0.82
RNF4-209ENST00000507784 CYTH3O43739 400 aa20.2■□□□□ 0.82
RNF4-209ENST00000507784 HMGCS2P54868 508 aa20.2■□□□□ 0.82
RNF4-209ENST00000507784 FKBP1BP68106 108 aa20.2■□□□□ 0.82
RNF4-209ENST00000507784 PPATQ06203 517 aa20.2■□□□□ 0.82
RNF4-209ENST00000507784 SLC35G1Q2M3R5 365 aa20.2■□□□□ 0.82
RNF4-209ENST00000507784 LDLRAD1Q5T700 205 aa20.2■□□□□ 0.82
RNF4-209ENST00000507784 OTUD7BQ6GQQ9 843 aa20.2■□□□□ 0.82
RNF4-209ENST00000507784 ADGRF4Q8IZF3 695 aa20.2■□□□□ 0.82
RNF4-209ENST00000507784 PIGSQ96S52 555 aa20.2■□□□□ 0.82
RNF4-209ENST00000507784 RIOX1Q9H6W3 641 aa20.2■□□□□ 0.82
RNF4-209ENST00000507784 EMILIN3Q9NT22 766 aa20.2■□□□□ 0.82
RNF4-209ENST00000507784 SEC63Q9UGP8 760 aaKnown RBP20.2■□□□□ 0.82
RNF4-209ENST00000507784 WDR46O15213 610 aaKnown RBP20.19■□□□□ 0.82
RNF4-209ENST00000507784 PKN1Q16512 942 aa20.19■□□□□ 0.82
RNF4-209ENST00000507784 SYDE2Q5VT97 1194 aa20.19■□□□□ 0.82
RNF4-209ENST00000507784 CHURC1Q8WUH1 139 aa20.19■□□□□ 0.82
RNF4-209ENST00000507784 LPAR1Q92633 364 aa20.19■□□□□ 0.82
RNF4-209ENST00000507784 SPDYE5A6NIY4 337 aa20.18■□□□□ 0.82
RNF4-209ENST00000507784 ZSCAN22P10073 491 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms