RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 LRP2BPQ9P2M1 347 aa6.01□□□□□ -1.45
HMGB1P28-201ENST00000507778 SUGT1Q9Y2Z0 365 aa6.01□□□□□ -1.45
HMGB1P28-201ENST00000507778 A0A087WZG4 1122 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 GNAT3A8MTJ3 354 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 WDR64B1ANS9 1081 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 SHOXO15266 292 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 ZNF865P0CJ78 1059 aaPredicted RBP6□□□□□ -1.45
HMGB1P28-201ENST00000507778 ITGA4P13612 1032 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 FSTP19883 344 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 ARHGAP27Q6ZUM4 889 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 DTWD2Q8NBA8 298 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 LRRN4CLQ8ND94 238 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 SHKBP1Q8TBC3 707 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 SH3TC2Q8TF17 1288 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 THAP3Q8WTV1 239 aaPredicted RBP6□□□□□ -1.45
HMGB1P28-201ENST00000507778 SGSM3Q96HU1 749 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 Q96M66 194 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 SPATA9Q9BWV2 254 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 OSBPL1AQ9BXW6 950 aa6□□□□□ -1.45
HMGB1P28-201ENST00000507778 ASCC2Q9H1I8 757 aaPredicted RBP6□□□□□ -1.45
HMGB1P28-201ENST00000507778 PRR33A8MZF0 331 aa5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 FAM155AB1AL88 458 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 RBAK-RBAKDNI3L0D1 243 aa5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 NOP56O00567 594 aaKnown RBP5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 ZNF445P59923 1031 aa5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 SNW1Q13573 536 aaKnown RBP5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 SLC51AQ86UW1 340 aa5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 NLGN1Q8N2Q7 840 aa5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 MFSD4AQ8N468 514 aa5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 JMYQ8N9B5 988 aa5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 BVESQ8NE79 360 aa5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 PIWIL2Q8TC59 973 aaKnown RBP5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 RCC1LQ96I51 464 aaKnown RBP5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 SPOCK3Q9BQ16 436 aa5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 GFOD1Q9NXC2 390 aa5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 PRR13Q9NZ81 148 aa5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 APEX2Q9UBZ4 518 aa5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 DIS3Q9Y2L1 958 aaKnown RBP5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 CAPN6Q9Y6Q1 641 aa5.99□□□□□ -1.45
HMGB1P28-201ENST00000507778 A0A1W2PQU0 124 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 HSD3B2P26439 372 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 OXCT1P55809 520 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 TNK2Q07912 1038 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 CPSF6Q16630 551 aaKnown RBP eCLIP5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 LONRF2Q1L5Z9 754 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 C2orf27AQ580R0 203 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 NKAPLQ5M9Q1 402 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 TMC3Q7Z5M5 1100 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 ARHGEF39Q8N4T4 335 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 ZNF513Q8N8E2 541 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 ADCY4Q8NFM4 1077 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 SYTL5Q8TDW5 730 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 BRF1Q92994 677 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 MKNK2Q9HBH9 465 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 LRRC4CQ9HCJ2 640 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 AKT3Q9Y243 479 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 FHOD1Q9Y613 1164 aa5.98□□□□□ -1.45
HMGB1P28-201ENST00000507778 ENPP3O14638 875 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 SIGLEC6O43699 453 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 CLSTN1O94985 981 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 PROCP04070 461 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 ITGAVP06756 1048 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 FAM153BP0C7A2 387 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 NMIQ13287 307 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 HSP90AA2PQ14568 343 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 RSPO4Q2I0M5 234 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 CLEC16AQ2KHT3 1053 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 POMZP3Q6PJE2 187 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 CRACR2BQ8N4Y2 399 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 FIBCD1Q8N539 461 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 ZBTB38Q8NAP3 1195 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 ENOX1Q8TC92 643 aaKnown RBP5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 APPBP2Q92624 585 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 DSCC1Q9BVC3 393 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 NOL6Q9H6R4 1146 aaKnown RBP5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 KANSL2Q9H9L4 492 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 CHST7Q9NS84 486 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 FANCLQ9NW38 375 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 TMEM260Q9NX78 707 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 LEMD3Q9Y2U8 911 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 EMC9Q9Y3B6 208 aa5.97□□□□□ -1.45
HMGB1P28-201ENST00000507778 ESYT3A0FGR9 886 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 ADCY3O60266 1144 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 PRAMEF1O95521 474 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 ITIH2P19823 946 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 PPP2R2AP63151 447 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 SQSTM1Q13501 440 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 PPP2R5DQ14738 602 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 NKPD1Q17RQ9 610 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 ZC3H12BQ5HYM0 836 aaKnown RBP5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 ZNF227Q86WZ6 799 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 HOMER1Q86YM7 354 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 FAM181AQ8N9Y4 354 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 ZSWIM2Q8NEG5 633 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 SLC26A8Q96RN1 970 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 LGR4Q9BXB1 951 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 GPR62Q9BZJ7 368 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 TRIT1Q9H3H1 467 aaKnown RBP5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 GPATCH2Q9NW75 528 aa5.96□□□□□ -1.46
HMGB1P28-201ENST00000507778 CGGBP1Q9UFW8 167 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms