RNA–Protein interactions for RNA: ENST00000507487.5

CAST-218, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-218	ENST00000507487	USP17L18	D6R9N7	530 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	USP17L22	D6RA61	530 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	USP17L17	D6RBQ6	530 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	USP17L19	D6RCP7	530 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	USP17L20	D6RJB6	530 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	ZBTB43	O43298	467 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	AOC2	O75106	756 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	PARP1	P09874	1014 aa	Known RBP	13.77	□□□□□ -0.21
CAST-218	ENST00000507487	HOXA7	P31268	230 aa	Predicted RBP	13.77	□□□□□ -0.21
CAST-218	ENST00000507487	RCAN1	P53805	252 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	USP17L24	Q0WX57	530 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	FAM83B	Q5T0W9	1011 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	TREML2	Q5T2D2	321 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	OTUD7B	Q6GQQ9	843 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	GPAT2	Q6NUI2	795 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	ANKRD23	Q86SG2	305 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	NUP133	Q8WUM0	1156 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	ZIC5	Q96T25	663 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.77	□□□□□ -0.21
CAST-218	ENST00000507487	ZCCHC17	Q9NP64	241 aa	Known RBP	13.77	□□□□□ -0.21
CAST-218	ENST00000507487	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.77	□□□□□ -0.21
CAST-218	ENST00000507487	SLC45A1	Q9Y2W3	748 aa		13.77	□□□□□ -0.21
CAST-218	ENST00000507487	THSD7B	Q9C0I4	1608 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	BTBD19	C9JJ37	291 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	OSBP	P22059	807 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	KIF5B	P33176	963 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	ZNF543	Q08ER8	600 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	GRM4	Q14833	912 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	PPP2R5B	Q15173	497 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	CCDC96	Q2M329	555 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	ASPRV1	Q53RT3	343 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	GPATCH4	Q5T3I0	446 aa	Known RBP	13.76	□□□□□ -0.21
CAST-218	ENST00000507487	CATSPERG	Q6ZRH7	1159 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	IFNL1	Q8IU54	200 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	CTCFL	Q8NI51	663 aa	Predicted RBP	13.76	□□□□□ -0.21
CAST-218	ENST00000507487	CHMP4C	Q96CF2	233 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	ZNF274	Q96GC6	653 aa	Predicted RBP	13.76	□□□□□ -0.21
CAST-218	ENST00000507487	NUP88	Q99567	741 aa	Predicted RBP	13.76	□□□□□ -0.21
CAST-218	ENST00000507487	PTPN18	Q99952	460 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	MYL10	Q9BUA6	226 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	TANGO6	Q9C0B7	1094 aa		13.76	□□□□□ -0.21
CAST-218	ENST00000507487	ISY1	Q9ULR0	285 aa	Known RBP	13.76	□□□□□ -0.21
CAST-218	ENST00000507487	PALM3	A6NDB9	673 aa	Predicted RBP	13.75	□□□□□ -0.21
CAST-218	ENST00000507487	GOLGA8B	A8MQT2	603 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	TMEM232	C9JQI7	657 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	PDHX	O00330	501 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	PLA2G6	O60733	806 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	PDIA3	P30101	505 aa	Known RBP	13.75	□□□□□ -0.21
CAST-218	ENST00000507487	MCM2	P49736	904 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	KCTD1	Q719H9	257 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	RASGRP2	Q7LDG7	609 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	MICU3	Q86XE3	530 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	FANCB	Q8NB91	859 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	CHURC1	Q8WUH1	139 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	LARP6	Q9BRS8	491 aa	Known RBP	13.75	□□□□□ -0.21
CAST-218	ENST00000507487	GPCPD1	Q9NPB8	672 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	FEM1B	Q9UK73	627 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	PNMA3	Q9UL41	463 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	LIMCH1	Q9UPQ0	1083 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	PARP14	Q460N5	1801 aa		13.75	□□□□□ -0.21
CAST-218	ENST00000507487	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.74	□□□□□ -0.21
CAST-218	ENST00000507487	GOLGA8A	A7E2F4	631 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
CAST-218	ENST00000507487	FLOT1	O75955	427 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	ALDH1A1	P00352	501 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	GOLGA8H	P0CJ92	632 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	RXRA	P19793	462 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	GNAQ	P50148	359 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	METAP2	P50579	478 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
CAST-218	ENST00000507487	STAT2	P52630	851 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	IRX3	P78415	501 aa	Predicted RBP	13.74	□□□□□ -0.21
CAST-218	ENST00000507487	COG2	Q14746	738 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	RTN1	Q16799	776 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	BTNL9	Q6UXG8	535 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	NOL8	Q76FK4	1167 aa	Known RBP	13.74	□□□□□ -0.21
CAST-218	ENST00000507487	FAM160B2	Q86V87	743 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	RAB11FIP4	Q86YS3	637 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	CCDC144CP	Q8IYA2	1237 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	FAM43A	Q8N2R8	423 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.74	□□□□□ -0.21
CAST-218	ENST00000507487	RBM28	Q9NW13	759 aa	Known RBP	13.74	□□□□□ -0.21
CAST-218	ENST00000507487	HOXC10	Q9NYD6	342 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	MAD2L2	Q9UI95	211 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	TPCN1	Q9ULQ1	816 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	HPS5	Q9UPZ3	1129 aa		13.74	□□□□□ -0.21
CAST-218	ENST00000507487	NID2	Q14112	1375 aa		13.73	□□□□□ -0.21
CAST-218	ENST00000507487	MYPN	Q86TC9	1320 aa		13.73	□□□□□ -0.21
CAST-218	ENST00000507487	RLF	Q13129	1914 aa		13.73	□□□□□ -0.21
CAST-218	ENST00000507487	CCDC196	A0A1B0GTZ2	297 aa		13.73	□□□□□ -0.21
CAST-218	ENST00000507487	KLRF2	D3W0D1	207 aa		13.73	□□□□□ -0.21
CAST-218	ENST00000507487	IK	Q13123	557 aa	Predicted RBP	13.73	□□□□□ -0.21
CAST-218	ENST00000507487	STAG2	Q8N3U4	1231 aa		13.73	□□□□□ -0.21
CAST-218	ENST00000507487	DNAJC5G	Q8N7S2	189 aa		13.73	□□□□□ -0.21
CAST-218	ENST00000507487	PRPF38A	Q8NAV1	312 aa	Known RBP	13.73	□□□□□ -0.21
CAST-218	ENST00000507487	PARK7	Q99497	189 aa	Known RBP	13.73	□□□□□ -0.21
CAST-218	ENST00000507487	SLF1	Q9BQI6	1058 aa		13.73	□□□□□ -0.21
CAST-218	ENST00000507487	LZTS2	Q9BRK4	669 aa		13.73	□□□□□ -0.21
CAST-218	ENST00000507487	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.73	□□□□□ -0.21
CAST-218	ENST00000507487	SLK	Q9H2G2	1235 aa	Predicted RBP	13.73	□□□□□ -0.21
CAST-218	ENST00000507487	PFKFB2	O60825	505 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms