RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 SEPT4O43236 478 aa16.15■□□□□ 0.18
POLR2J3-212ENST00000507355 CHGBP05060 677 aa16.15■□□□□ 0.18
POLR2J3-212ENST00000507355 KIAA1755Q5JYT7 1200 aa16.15■□□□□ 0.18
POLR2J3-212ENST00000507355 OLFML2BQ68BL8 750 aa16.15■□□□□ 0.18
POLR2J3-212ENST00000507355 TMEM179Q6ZVK1 233 aa16.15■□□□□ 0.18
POLR2J3-212ENST00000507355 SIAH1Q8IUQ4 282 aa16.15■□□□□ 0.18
POLR2J3-212ENST00000507355 SYMPKQ92797 1274 aaKnown RBP16.15■□□□□ 0.18
POLR2J3-212ENST00000507355 HAUS7Q99871 368 aa16.15■□□□□ 0.18
POLR2J3-212ENST00000507355 MOV10L1Q9BXT6 1211 aaKnown RBP16.15■□□□□ 0.18
POLR2J3-212ENST00000507355 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.15■□□□□ 0.18
POLR2J3-212ENST00000507355 RCAN3Q9UKA8 241 aa16.15■□□□□ 0.18
POLR2J3-212ENST00000507355 CYP2D7A0A087X1C5 515 aa16.14■□□□□ 0.17
POLR2J3-212ENST00000507355 USP17L12C9JPN9 530 aa16.14■□□□□ 0.17
POLR2J3-212ENST00000507355 USP17L21D6R901 530 aa16.14■□□□□ 0.17
POLR2J3-212ENST00000507355 SMIM22K7EJ46 135 aa16.14■□□□□ 0.17
POLR2J3-212ENST00000507355 IGHA2P01877 340 aa16.14■□□□□ 0.17
POLR2J3-212ENST00000507355 AKR1B1P15121 316 aa16.14■□□□□ 0.17
POLR2J3-212ENST00000507355 CDK8P49336 464 aa16.14■□□□□ 0.17
POLR2J3-212ENST00000507355 TLE2Q04725 743 aa16.14■□□□□ 0.17
POLR2J3-212ENST00000507355 PLS1Q14651 629 aa16.14■□□□□ 0.17
POLR2J3-212ENST00000507355 LRRC41Q15345 812 aa16.14■□□□□ 0.17
POLR2J3-212ENST00000507355 FAM47AQ5JRC9 791 aa16.14■□□□□ 0.17
POLR2J3-212ENST00000507355 C12orf60Q5U649 245 aa16.14■□□□□ 0.17
POLR2J3-212ENST00000507355 SMARCA5O60264 1052 aaPredicted RBP16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 COBLO75128 1261 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 ERCC3P19447 782 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 ITGB8P26012 769 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 DSG3P32926 999 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 EPHB4P54760 987 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 UBE3CQ15386 1083 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 CLEC10AQ8IUN9 316 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 USP38Q8NB14 1042 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 CCDC17Q96LX7 622 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 LRRCC1Q9C099 1032 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 SPATC1LQ9H0A9 340 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 ARHGEF10LQ9HCE6 1279 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 TMX2Q9Y320 296 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 MUC3AQ02505 3323 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 A0A0G2JMZ2 1700 aa16.13■□□□□ 0.17
POLR2J3-212ENST00000507355 STRNO43815 780 aa16.12■□□□□ 0.17
POLR2J3-212ENST00000507355 PQBP1O60828 265 aaKnown RBP16.12■□□□□ 0.17
POLR2J3-212ENST00000507355 CLTBP09497 229 aa16.12■□□□□ 0.17
POLR2J3-212ENST00000507355 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
POLR2J3-212ENST00000507355 C20orf194Q5TEA3 1177 aa16.12■□□□□ 0.17
POLR2J3-212ENST00000507355 SAMD1Q6SPF0 538 aaPredicted RBP16.12■□□□□ 0.17
POLR2J3-212ENST00000507355 AMOTL1Q8IY63 956 aa16.12■□□□□ 0.17
POLR2J3-212ENST00000507355 SPICE1Q8N0Z3 855 aa16.12■□□□□ 0.17
POLR2J3-212ENST00000507355 SLC4A4Q9Y6R1 1079 aa16.12■□□□□ 0.17
POLR2J3-212ENST00000507355 BAZ2AQ9UIF9 1905 aaKnown RBP16.11■□□□□ 0.17
POLR2J3-212ENST00000507355 FLOT1O75955 427 aa16.11■□□□□ 0.17
POLR2J3-212ENST00000507355 COL9A1P20849 921 aa16.11■□□□□ 0.17
POLR2J3-212ENST00000507355 ICA1Q05084 483 aa16.11■□□□□ 0.17
POLR2J3-212ENST00000507355 GRIN2CQ14957 1233 aa16.11■□□□□ 0.17
POLR2J3-212ENST00000507355 TJAP1Q5JTD0 557 aa16.11■□□□□ 0.17
POLR2J3-212ENST00000507355 ZSCAN25Q6NSZ9 544 aa16.11■□□□□ 0.17
POLR2J3-212ENST00000507355 NCAPG2Q86XI2 1143 aa16.11■□□□□ 0.17
POLR2J3-212ENST00000507355 SHCBP1Q8NEM2 672 aa16.11■□□□□ 0.17
POLR2J3-212ENST00000507355 DDRGK1Q96HY6 314 aa16.11■□□□□ 0.17
POLR2J3-212ENST00000507355 PUS7LQ9H0K6 701 aaKnown RBP16.11■□□□□ 0.17
POLR2J3-212ENST00000507355 VCPKMTQ9H867 229 aa16.11■□□□□ 0.17
POLR2J3-212ENST00000507355 XPNPEP3Q9NQH7 507 aa16.11■□□□□ 0.17
POLR2J3-212ENST00000507355 SLC5A4Q9NY91 659 aa16.11■□□□□ 0.17
POLR2J3-212ENST00000507355 TMEM265A0A087WTH1 108 aa16.1■□□□□ 0.17
POLR2J3-212ENST00000507355 RAG1P15918 1043 aa16.1■□□□□ 0.17
POLR2J3-212ENST00000507355 DNAJB2P25686 324 aa16.1■□□□□ 0.17
POLR2J3-212ENST00000507355 FPGSQ05932 587 aa16.1■□□□□ 0.17
POLR2J3-212ENST00000507355 C1orf53Q5VUE5 145 aa16.1■□□□□ 0.17
POLR2J3-212ENST00000507355 CTR9Q6PD62 1173 aa16.1■□□□□ 0.17
POLR2J3-212ENST00000507355 C16orf86Q6ZW13 317 aa16.1■□□□□ 0.17
POLR2J3-212ENST00000507355 MB21D1Q8N884 522 aa16.1■□□□□ 0.17
POLR2J3-212ENST00000507355 ATG4CQ96DT6 458 aa16.1■□□□□ 0.17
POLR2J3-212ENST00000507355 MAML3Q96JK9 1138 aa16.1■□□□□ 0.17
POLR2J3-212ENST00000507355 SH2D4AQ9H788 454 aa16.1■□□□□ 0.17
POLR2J3-212ENST00000507355 PHF24Q9UPV7 400 aa16.1■□□□□ 0.17
POLR2J3-212ENST00000507355 TACC3Q9Y6A5 838 aa16.1■□□□□ 0.17
POLR2J3-212ENST00000507355 SMCHD1A6NHR9 2005 aa16.1■□□□□ 0.17
POLR2J3-212ENST00000507355 TNFRSF10AO00220 468 aa16.09■□□□□ 0.17
POLR2J3-212ENST00000507355 PGK1P00558 417 aa16.09■□□□□ 0.17
POLR2J3-212ENST00000507355 RARBP10826 455 aa16.09■□□□□ 0.17
POLR2J3-212ENST00000507355 EEF2P13639 858 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-212ENST00000507355 PPM1EQ8WY54 764 aa16.09■□□□□ 0.17
POLR2J3-212ENST00000507355 MROH8Q9H579 483 aa16.09■□□□□ 0.17
POLR2J3-212ENST00000507355 RAPGEFL1Q9UHV5 662 aa16.09■□□□□ 0.17
POLR2J3-212ENST00000507355 MYH8P13535 1937 aa16.09■□□□□ 0.17
POLR2J3-212ENST00000507355 BDP1A6H8Y1 2624 aa16.08■□□□□ 0.17
POLR2J3-212ENST00000507355 ZNFX1Q9P2E3 1918 aaKnown RBP16.08■□□□□ 0.16
POLR2J3-212ENST00000507355 A0A1W2PQ45 241 aaPredicted RBP16.08■□□□□ 0.16
POLR2J3-212ENST00000507355 A0A1W2PQY0 241 aa16.08■□□□□ 0.16
POLR2J3-212ENST00000507355 WDR46O15213 610 aaKnown RBP16.08■□□□□ 0.16
POLR2J3-212ENST00000507355 LENG1Q96BZ8 264 aaPredicted RBP16.08■□□□□ 0.16
POLR2J3-212ENST00000507355 KANSL2Q9H9L4 492 aa16.08■□□□□ 0.16
POLR2J3-212ENST00000507355 ECHDC1Q9NTX5 307 aa16.08■□□□□ 0.16
POLR2J3-212ENST00000507355 TMEM39AQ9NV64 488 aa16.08■□□□□ 0.16
POLR2J3-212ENST00000507355 KIAA0355O15063 1070 aa16.07■□□□□ 0.16
POLR2J3-212ENST00000507355 PGK2P07205 417 aa16.07■□□□□ 0.16
POLR2J3-212ENST00000507355 FCER1AP12319 257 aa16.07■□□□□ 0.16
POLR2J3-212ENST00000507355 TMEM132BQ14DG7 1078 aa16.07■□□□□ 0.16
POLR2J3-212ENST00000507355 RNF180Q86T96 592 aa16.07■□□□□ 0.16
POLR2J3-212ENST00000507355 ABRAQ8N0Z2 381 aa16.07■□□□□ 0.16
POLR2J3-212ENST00000507355 TIFAQ96CG3 184 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms