RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 ADM5C9JUS6 153 aa11.61□□□□□ -0.55
CLCN3-205ENST00000506924 WNT10BO00744 389 aa11.61□□□□□ -0.55
CLCN3-205ENST00000506924 SMARCA5O60264 1052 aaPredicted RBP11.61□□□□□ -0.55
CLCN3-205ENST00000506924 FKBP1AP62942 108 aaKnown RBP11.61□□□□□ -0.55
CLCN3-205ENST00000506924 DLGAP5Q15398 846 aa11.61□□□□□ -0.55
CLCN3-205ENST00000506924 CFAP100Q494V2 611 aa11.61□□□□□ -0.55
CLCN3-205ENST00000506924 PRICKLE2Q7Z3G6 844 aa11.61□□□□□ -0.55
CLCN3-205ENST00000506924 AACSQ86V21 672 aa11.61□□□□□ -0.55
CLCN3-205ENST00000506924 ERC1Q8IUD2 1116 aa11.61□□□□□ -0.55
CLCN3-205ENST00000506924 DCPSQ96C86 337 aaKnown RBP11.61□□□□□ -0.55
CLCN3-205ENST00000506924 ZNF408Q9H9D4 720 aa11.61□□□□□ -0.55
CLCN3-205ENST00000506924 CXXC1Q9P0U4 656 aaPredicted RBP11.61□□□□□ -0.55
CLCN3-205ENST00000506924 AOX1Q06278 1338 aa11.6□□□□□ -0.55
CLCN3-205ENST00000506924 C4orf17Q53FE4 359 aa11.6□□□□□ -0.55
CLCN3-205ENST00000506924 HSP90AB4PQ58FF6 505 aa11.6□□□□□ -0.55
CLCN3-205ENST00000506924 TTC39AQ5SRH9 613 aa11.6□□□□□ -0.55
CLCN3-205ENST00000506924 PRAMEF18Q5VWM3 479 aa11.6□□□□□ -0.55
CLCN3-205ENST00000506924 KRT26Q7Z3Y9 468 aa11.6□□□□□ -0.55
CLCN3-205ENST00000506924 TBC1D22AQ8WUA7 517 aa11.6□□□□□ -0.55
CLCN3-205ENST00000506924 SCG3Q8WXD2 468 aaKnown RBP11.6□□□□□ -0.55
CLCN3-205ENST00000506924 COL26A1Q96A83 441 aa11.6□□□□□ -0.55
CLCN3-205ENST00000506924 PRMT6Q96LA8 375 aaPredicted RBP11.6□□□□□ -0.55
CLCN3-205ENST00000506924 GPR108Q9NPR9 543 aa11.6□□□□□ -0.55
CLCN3-205ENST00000506924 HMG20BQ9P0W2 317 aa11.6□□□□□ -0.55
CLCN3-205ENST00000506924 ABCF2Q9UG63 623 aa11.6□□□□□ -0.55
CLCN3-205ENST00000506924 PGAP2Q9UHJ9 254 aa11.6□□□□□ -0.55
CLCN3-205ENST00000506924 DBNLQ9UJU6 430 aaKnown RBP11.6□□□□□ -0.55
CLCN3-205ENST00000506924 DENND2AQ9ULE3 1009 aa11.6□□□□□ -0.55
CLCN3-205ENST00000506924 PASKQ96RG2 1323 aa11.6□□□□□ -0.55
CLCN3-205ENST00000506924 CLRN2A0PK11 232 aa11.59□□□□□ -0.55
CLCN3-205ENST00000506924 FIGNL2A6NMB9 653 aa11.59□□□□□ -0.55
CLCN3-205ENST00000506924 PPP1R12BO60237 982 aaPredicted RBP11.59□□□□□ -0.55
CLCN3-205ENST00000506924 PRDX5P30044 214 aa11.59□□□□□ -0.55
CLCN3-205ENST00000506924 MCAMP43121 646 aa11.59□□□□□ -0.55
CLCN3-205ENST00000506924 CRKP46108 304 aa11.59□□□□□ -0.55
CLCN3-205ENST00000506924 CCDC158Q5M9N0 1113 aa11.59□□□□□ -0.55
CLCN3-205ENST00000506924 CDC37L1Q7L3B6 337 aa11.59□□□□□ -0.55
CLCN3-205ENST00000506924 SPATA5Q8NB90 893 aa11.59□□□□□ -0.55
CLCN3-205ENST00000506924 WDR66Q8TBY9 1149 aa11.59□□□□□ -0.55
CLCN3-205ENST00000506924 KIF1BPQ96EK5 621 aa11.59□□□□□ -0.55
CLCN3-205ENST00000506924 C2orf49Q9BVC5 232 aaPredicted RBP11.59□□□□□ -0.55
CLCN3-205ENST00000506924 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLCN3-205ENST00000506924 ZDHHC3Q9NYG2 299 aa11.59□□□□□ -0.55
CLCN3-205ENST00000506924 USP3Q9Y6I4 520 aa11.59□□□□□ -0.55
CLCN3-205ENST00000506924 A0A1B0GTH6 734 aa11.58□□□□□ -0.56
CLCN3-205ENST00000506924 SERTM1A2A2V5 107 aa11.58□□□□□ -0.56
CLCN3-205ENST00000506924 RAB11FIP3O75154 756 aa11.58□□□□□ -0.56
CLCN3-205ENST00000506924 LDHBP07195 334 aaKnown RBP11.58□□□□□ -0.56
CLCN3-205ENST00000506924 ARID4AP29374 1257 aaPredicted RBP11.58□□□□□ -0.56
CLCN3-205ENST00000506924 NOS2P35228 1153 aa11.58□□□□□ -0.56
CLCN3-205ENST00000506924 POU4F2Q12837 409 aa11.58□□□□□ -0.56
CLCN3-205ENST00000506924 CLASRPQ8N2M8 674 aaKnown RBP11.58□□□□□ -0.56
CLCN3-205ENST00000506924 TDRD3Q9H7E2 651 aaKnown RBP11.58□□□□□ -0.56
CLCN3-205ENST00000506924 VEZTQ9HBM0 779 aa11.58□□□□□ -0.56
CLCN3-205ENST00000506924 DYRK1BQ9Y463 629 aa11.58□□□□□ -0.56
CLCN3-205ENST00000506924 GPC6Q9Y625 555 aaPredicted RBP11.58□□□□□ -0.56
CLCN3-205ENST00000506924 EML1O00423 815 aa11.57□□□□□ -0.56
CLCN3-205ENST00000506924 CELF2O95319 508 aaKnown RBP11.57□□□□□ -0.56
CLCN3-205ENST00000506924 IFIT2P09913 472 aaKnown RBP11.57□□□□□ -0.56
CLCN3-205ENST00000506924 UQCRFS1P1P0C7P4 283 aa11.57□□□□□ -0.56
CLCN3-205ENST00000506924 CST9Q5W186 159 aa11.57□□□□□ -0.56
CLCN3-205ENST00000506924 ZBED3Q96IU2 234 aaPredicted RBP11.57□□□□□ -0.56
CLCN3-205ENST00000506924 LRRCC1Q9C099 1032 aa11.57□□□□□ -0.56
CLCN3-205ENST00000506924 DCTPP1Q9H773 170 aa11.57□□□□□ -0.56
CLCN3-205ENST00000506924 PRMT3O60678 531 aa11.56□□□□□ -0.56
CLCN3-205ENST00000506924 BRD1O95696 1058 aa11.56□□□□□ -0.56
CLCN3-205ENST00000506924 PDIA4P13667 645 aaKnown RBP11.56□□□□□ -0.56
CLCN3-205ENST00000506924 SNRPBP14678 240 aaKnown RBP11.56□□□□□ -0.56
CLCN3-205ENST00000506924 ZAP70P43403 619 aa11.56□□□□□ -0.56
CLCN3-205ENST00000506924 CACNB3P54284 484 aa11.56□□□□□ -0.56
CLCN3-205ENST00000506924 C1orf53Q5VUE5 145 aa11.56□□□□□ -0.56
CLCN3-205ENST00000506924 ZDHHC1Q8WTX9 485 aa11.56□□□□□ -0.56
CLCN3-205ENST00000506924 TEKT1Q969V4 418 aa11.56□□□□□ -0.56
CLCN3-205ENST00000506924 CDCA5Q96FF9 252 aa11.56□□□□□ -0.56
CLCN3-205ENST00000506924 TIMMDC1Q9NPL8 285 aa11.56□□□□□ -0.56
CLCN3-205ENST00000506924 ABT1Q9ULW3 272 aaKnown RBP11.56□□□□□ -0.56
CLCN3-205ENST00000506924 SLC35F4A4IF30 521 aa11.55□□□□□ -0.56
CLCN3-205ENST00000506924 TCP10L2B9ZVM9 353 aa11.55□□□□□ -0.56
CLCN3-205ENST00000506924 MYO1BO43795 1136 aa11.55□□□□□ -0.56
CLCN3-205ENST00000506924 CYP2E1P05181 493 aaPredicted RBP11.55□□□□□ -0.56
CLCN3-205ENST00000506924 MMP14P50281 582 aa11.55□□□□□ -0.56
CLCN3-205ENST00000506924 DZIP1Q86YF9 867 aaKnown RBP11.55□□□□□ -0.56
CLCN3-205ENST00000506924 RAI14Q9P0K7 980 aa11.55□□□□□ -0.56
CLCN3-205ENST00000506924 ZNF70Q9UC06 446 aaPredicted RBP11.55□□□□□ -0.56
CLCN3-205ENST00000506924 SALL1Q9NSC2 1324 aa11.55□□□□□ -0.56
CLCN3-205ENST00000506924 TRPM7Q96QT4 1865 aa11.55□□□□□ -0.56
CLCN3-205ENST00000506924 AKAP11Q9UKA4 1901 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 IGHDP01880 384 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 PLA2G4AP47712 749 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 MECOMQ03112 1051 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 PTSQ03393 145 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 GRM1Q13255 1194 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 PRKG1Q13976 671 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 TSHZ3Q63HK5 1081 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 APOBEC3HQ6NTF7 200 aaKnown RBP11.54□□□□□ -0.56
CLCN3-205ENST00000506924 ZGPATQ8N5A5 531 aaKnown RBP11.54□□□□□ -0.56
CLCN3-205ENST00000506924 PRIMPOLQ96LW4 560 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 ZDHHC15Q96MV8 337 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 ANTXR1Q9H6X2 564 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 PIH1D3Q9NQM4 214 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms