RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 LACTBP83111 547 aaPredicted RBP16.24■□□□□ 0.19
SERF1B-204ENST00000506542 ST3GAL1Q11201 340 aa16.24■□□□□ 0.19
SERF1B-204ENST00000506542 USP17L2Q6R6M4 530 aa16.24■□□□□ 0.19
SERF1B-204ENST00000506542 KRT23Q9C075 422 aa16.24■□□□□ 0.19
SERF1B-204ENST00000506542 KIAA1683Q9H0B3 1180 aa16.24■□□□□ 0.19
SERF1B-204ENST00000506542 RLFQ13129 1914 aa16.24■□□□□ 0.19
SERF1B-204ENST00000506542 RAD21O60216 631 aa16.24■□□□□ 0.19
SERF1B-204ENST00000506542 PCP11498 1178 aaKnown RBP16.24■□□□□ 0.19
SERF1B-204ENST00000506542 TPRNQ4KMQ1 711 aa16.24■□□□□ 0.19
SERF1B-204ENST00000506542 CCDC83Q8IWF9 413 aa16.24■□□□□ 0.19
SERF1B-204ENST00000506542 TRIM47Q96LD4 638 aa16.24■□□□□ 0.19
SERF1B-204ENST00000506542 TXNRD2Q9NNW7 524 aa16.24■□□□□ 0.19
SERF1B-204ENST00000506542 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.24■□□□□ 0.19
SERF1B-204ENST00000506542 PARP14Q460N5 1801 aa16.23■□□□□ 0.19
SERF1B-204ENST00000506542 EVCP57679 992 aa16.23■□□□□ 0.19
SERF1B-204ENST00000506542 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
SERF1B-204ENST00000506542 CYB5R4Q7L1T6 521 aa16.23■□□□□ 0.19
SERF1B-204ENST00000506542 ERO1AQ96HE7 468 aa16.23■□□□□ 0.19
SERF1B-204ENST00000506542 CCDC17Q96LX7 622 aa16.23■□□□□ 0.19
SERF1B-204ENST00000506542 RPAP3Q9H6T3 665 aaPredicted RBP16.23■□□□□ 0.19
SERF1B-204ENST00000506542 EFCC1Q9HA90 598 aa16.23■□□□□ 0.19
SERF1B-204ENST00000506542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
SERF1B-204ENST00000506542 SLC45A1Q9Y2W3 748 aa16.23■□□□□ 0.19
SERF1B-204ENST00000506542 FGRP09769 529 aa16.22■□□□□ 0.19
SERF1B-204ENST00000506542 PSMC4P43686 418 aa16.22■□□□□ 0.19
SERF1B-204ENST00000506542 IRX3P78415 501 aaPredicted RBP16.22■□□□□ 0.19
SERF1B-204ENST00000506542 TFAP4Q01664 338 aa16.22■□□□□ 0.19
SERF1B-204ENST00000506542 APOBRQ0VD83 1088 aa16.22■□□□□ 0.19
SERF1B-204ENST00000506542 NECAB1Q8N987 351 aa16.22■□□□□ 0.19
SERF1B-204ENST00000506542 CEP95Q96GE4 821 aa16.22■□□□□ 0.19
SERF1B-204ENST00000506542 IGKV6D-41A0A0C4DH26 115 aa16.21■□□□□ 0.19
SERF1B-204ENST00000506542 KDM4AO75164 1064 aa16.21■□□□□ 0.19
SERF1B-204ENST00000506542 HERVK_113P62684 666 aa16.21■□□□□ 0.19
SERF1B-204ENST00000506542 RRP12Q5JTH9 1297 aaKnown RBP16.21■□□□□ 0.19
SERF1B-204ENST00000506542 RASGRP2Q7LDG7 609 aa16.21■□□□□ 0.19
SERF1B-204ENST00000506542 ZNF444Q8N0Y2 327 aaPredicted RBP16.21■□□□□ 0.19
SERF1B-204ENST00000506542 GTF3C6Q969F1 213 aa16.21■□□□□ 0.19
SERF1B-204ENST00000506542 TMEM87BQ96K49 555 aa16.21■□□□□ 0.19
SERF1B-204ENST00000506542 C12orf42Q96LP6 360 aa16.21■□□□□ 0.19
SERF1B-204ENST00000506542 NUP88Q99567 741 aaPredicted RBP16.21■□□□□ 0.19
SERF1B-204ENST00000506542 ZSWIM5Q9P217 1185 aa16.21■□□□□ 0.19
SERF1B-204ENST00000506542 CCDC85CA6NKD9 419 aa16.21■□□□□ 0.18
SERF1B-204ENST00000506542 TULP1O00294 542 aaPredicted RBP16.21■□□□□ 0.18
SERF1B-204ENST00000506542 PFKFB2O60825 505 aa16.21■□□□□ 0.18
SERF1B-204ENST00000506542 OSBPP22059 807 aa16.21■□□□□ 0.18
SERF1B-204ENST00000506542 HOXA7P31268 230 aaPredicted RBP16.21■□□□□ 0.18
SERF1B-204ENST00000506542 NUCB2P80303 420 aa16.21■□□□□ 0.18
SERF1B-204ENST00000506542 PDE4BQ07343 736 aa16.21■□□□□ 0.18
SERF1B-204ENST00000506542 LRRC47Q8N1G4 583 aaKnown RBP16.21■□□□□ 0.18
SERF1B-204ENST00000506542 ZNF274Q96GC6 653 aaPredicted RBP16.21■□□□□ 0.18
SERF1B-204ENST00000506542 MTA3Q9BTC8 594 aa16.21■□□□□ 0.18
SERF1B-204ENST00000506542 PAGR1Q9BTK6 254 aa16.21■□□□□ 0.18
SERF1B-204ENST00000506542 KANSL2Q9H9L4 492 aa16.21■□□□□ 0.18
SERF1B-204ENST00000506542 ARHGEF10LQ9HCE6 1279 aa16.21■□□□□ 0.18
SERF1B-204ENST00000506542 GPHNQ9NQX3 736 aaPredicted RBP16.21■□□□□ 0.18
SERF1B-204ENST00000506542 TOMM22Q9NS69 142 aa16.21■□□□□ 0.18
SERF1B-204ENST00000506542 CLIP2Q9UDT6 1046 aa16.21■□□□□ 0.18
SERF1B-204ENST00000506542 PNMA3Q9UL41 463 aa16.21■□□□□ 0.18
SERF1B-204ENST00000506542 HPS5Q9UPZ3 1129 aa16.21■□□□□ 0.18
SERF1B-204ENST00000506542 TMX2Q9Y320 296 aa16.21■□□□□ 0.18
SERF1B-204ENST00000506542 COL11A1P12107 1806 aaPredicted RBP16.2■□□□□ 0.18
SERF1B-204ENST00000506542 SH2B2O14492 632 aaPredicted RBP16.2■□□□□ 0.18
SERF1B-204ENST00000506542 RANBP6O60518 1105 aaKnown RBP16.2■□□□□ 0.18
SERF1B-204ENST00000506542 FMNL1O95466 1100 aaPredicted RBP16.2■□□□□ 0.18
SERF1B-204ENST00000506542 SLC3A2P08195 630 aaKnown RBP16.2■□□□□ 0.18
SERF1B-204ENST00000506542 TSPY3P0CV98 308 aa16.2■□□□□ 0.18
SERF1B-204ENST00000506542 TSPY8P0CW00 308 aa16.2■□□□□ 0.18
SERF1B-204ENST00000506542 USP14P54578 494 aa16.2■□□□□ 0.18
SERF1B-204ENST00000506542 STK3Q13188 491 aa16.2■□□□□ 0.18
SERF1B-204ENST00000506542 Q3C1V9 767 aa16.2■□□□□ 0.18
SERF1B-204ENST00000506542 IFFO2Q5TF58 517 aa16.2■□□□□ 0.18
SERF1B-204ENST00000506542 CATSPERGQ6ZRH7 1159 aa16.2■□□□□ 0.18
SERF1B-204ENST00000506542 TANGO6Q9C0B7 1094 aa16.2■□□□□ 0.18
SERF1B-204ENST00000506542 IL17RBQ9NRM6 502 aa16.2■□□□□ 0.18
SERF1B-204ENST00000506542 RBPJLQ9UBG7 517 aa16.2■□□□□ 0.18
SERF1B-204ENST00000506542 GABRQQ9UN88 632 aa16.2■□□□□ 0.18
SERF1B-204ENST00000506542 SMC3Q9UQE7 1217 aa16.2■□□□□ 0.18
SERF1B-204ENST00000506542 PTCH2Q9Y6C5 1203 aa16.2■□□□□ 0.18
SERF1B-204ENST00000506542 ORC4O43929 436 aa16.19■□□□□ 0.18
SERF1B-204ENST00000506542 MYCP01106 439 aaPredicted RBP16.19■□□□□ 0.18
SERF1B-204ENST00000506542 PABPC4Q13310 644 aaKnown RBP eCLIP16.19■□□□□ 0.18
SERF1B-204ENST00000506542 ESR2Q92731 530 aa16.19■□□□□ 0.18
SERF1B-204ENST00000506542 VCPKMTQ9H867 229 aa16.19■□□□□ 0.18
SERF1B-204ENST00000506542 FBXO28Q9NVF7 368 aa16.19■□□□□ 0.18
SERF1B-204ENST00000506542 PTPN22Q9Y2R2 807 aa16.19■□□□□ 0.18
SERF1B-204ENST00000506542 USP17L15C9J2P7 530 aa16.18■□□□□ 0.18
SERF1B-204ENST00000506542 USP17L13C9JLJ4 530 aa16.18■□□□□ 0.18
SERF1B-204ENST00000506542 USP17L11C9JVI0 530 aa16.18■□□□□ 0.18
SERF1B-204ENST00000506542 USP17L18D6R9N7 530 aa16.18■□□□□ 0.18
SERF1B-204ENST00000506542 USP17L22D6RA61 530 aa16.18■□□□□ 0.18
SERF1B-204ENST00000506542 USP17L17D6RBQ6 530 aa16.18■□□□□ 0.18
SERF1B-204ENST00000506542 USP17L19D6RCP7 530 aa16.18■□□□□ 0.18
SERF1B-204ENST00000506542 USP17L20D6RJB6 530 aa16.18■□□□□ 0.18
SERF1B-204ENST00000506542 CNMDO75829 334 aa16.18■□□□□ 0.18
SERF1B-204ENST00000506542 PDIA3P30101 505 aaKnown RBP16.18■□□□□ 0.18
SERF1B-204ENST00000506542 LIFRP42702 1097 aa16.18■□□□□ 0.18
SERF1B-204ENST00000506542 USP17L24Q0WX57 530 aa16.18■□□□□ 0.18
SERF1B-204ENST00000506542 SCRN1Q12765 414 aa16.18■□□□□ 0.18
SERF1B-204ENST00000506542 PKP1Q13835 747 aa16.18■□□□□ 0.18
SERF1B-204ENST00000506542 NEDD1Q8NHV4 660 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms