RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 HPS5Q9UPZ3 1129 aa21.53■■□□□ 1.04
PDLIM7-216ENST00000506537 RABGAP1Q9Y3P9 1069 aa21.53■■□□□ 1.04
PDLIM7-216ENST00000506537 ARHGEF6Q15052 776 aa21.52■■□□□ 1.04
PDLIM7-216ENST00000506537 SLFN13Q68D06 897 aa21.52■■□□□ 1.04
PDLIM7-216ENST00000506537 TMEM47Q9BQJ4 181 aa21.52■■□□□ 1.04
PDLIM7-216ENST00000506537 ZKSCAN3Q9BRR0 538 aa21.52■■□□□ 1.04
PDLIM7-216ENST00000506537 PORCNQ9H237 461 aa21.52■■□□□ 1.04
PDLIM7-216ENST00000506537 SRRDQ9UH36 339 aa21.52■■□□□ 1.04
PDLIM7-216ENST00000506537 PTCH2Q9Y6C5 1203 aa21.52■■□□□ 1.04
PDLIM7-216ENST00000506537 COL11A1P12107 1806 aaPredicted RBP21.52■■□□□ 1.04
PDLIM7-216ENST00000506537 MYPNQ86TC9 1320 aa21.52■■□□□ 1.03
PDLIM7-216ENST00000506537 CCDC85CA6NKD9 419 aa21.51■■□□□ 1.03
PDLIM7-216ENST00000506537 GNRH1P01148 92 aa21.51■■□□□ 1.03
PDLIM7-216ENST00000506537 NT5C2P49902 561 aa21.51■■□□□ 1.03
PDLIM7-216ENST00000506537 CASC1Q6TDU7 716 aa21.51■■□□□ 1.03
PDLIM7-216ENST00000506537 KRT23Q9C075 422 aa21.51■■□□□ 1.03
PDLIM7-216ENST00000506537 CNNM2Q9H8M5 875 aa21.51■■□□□ 1.03
PDLIM7-216ENST00000506537 HOXC10Q9NYD6 342 aa21.51■■□□□ 1.03
PDLIM7-216ENST00000506537 ZSWIM5Q9P217 1185 aa21.51■■□□□ 1.03
PDLIM7-216ENST00000506537 GABRQQ9UN88 632 aa21.51■■□□□ 1.03
PDLIM7-216ENST00000506537 DOCK3Q8IZD9 2030 aa21.51■■□□□ 1.03
PDLIM7-216ENST00000506537 PLXNB2O15031 1838 aa21.5■■□□□ 1.03
PDLIM7-216ENST00000506537 TNPO2O14787 897 aaKnown RBP21.5■■□□□ 1.03
PDLIM7-216ENST00000506537 PRKCZQ05513 592 aa21.5■■□□□ 1.03
PDLIM7-216ENST00000506537 SAMD1Q6SPF0 538 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-216ENST00000506537 CHMP4CQ96CF2 233 aa21.5■■□□□ 1.03
PDLIM7-216ENST00000506537 GMCL1Q96IK5 515 aa21.5■■□□□ 1.03
PDLIM7-216ENST00000506537 PPP1R9AQ9ULJ8 1098 aa21.5■■□□□ 1.03
PDLIM7-216ENST00000506537 ADAMTS5Q9UNA0 930 aa21.5■■□□□ 1.03
PDLIM7-216ENST00000506537 E7EWF7 191 aa21.49■■□□□ 1.03
PDLIM7-216ENST00000506537 TOP1P11387 765 aaKnown RBP21.49■■□□□ 1.03
PDLIM7-216ENST00000506537 CYB5R4Q7L1T6 521 aa21.49■■□□□ 1.03
PDLIM7-216ENST00000506537 SLC27A2O14975 620 aa21.48■■□□□ 1.03
PDLIM7-216ENST00000506537 BMP3P12645 472 aa21.48■■□□□ 1.03
PDLIM7-216ENST00000506537 MCCP23508 829 aa21.48■■□□□ 1.03
PDLIM7-216ENST00000506537 RGS19P49795 217 aa21.48■■□□□ 1.03
PDLIM7-216ENST00000506537 PRMT2P55345 433 aa21.48■■□□□ 1.03
PDLIM7-216ENST00000506537 NECTIN1Q15223 517 aa21.48■■□□□ 1.03
PDLIM7-216ENST00000506537 MB21D1Q8N884 522 aa21.48■■□□□ 1.03
PDLIM7-216ENST00000506537 ENAHQ8N8S7 591 aaPredicted RBP21.48■■□□□ 1.03
PDLIM7-216ENST00000506537 REPS2Q8NFH8 660 aa21.48■■□□□ 1.03
PDLIM7-216ENST00000506537 ZSCAN10Q96SZ4 725 aaPredicted RBP21.48■■□□□ 1.03
PDLIM7-216ENST00000506537 SLF1Q9BQI6 1058 aa21.48■■□□□ 1.03
PDLIM7-216ENST00000506537 MTMR7Q9Y216 660 aa21.48■■□□□ 1.03
PDLIM7-216ENST00000506537 VWA5AO00534 786 aa21.47■■□□□ 1.03
PDLIM7-216ENST00000506537 HOXD10P28358 340 aa21.47■■□□□ 1.03
PDLIM7-216ENST00000506537 SLC1A4P43007 532 aa21.47■■□□□ 1.03
PDLIM7-216ENST00000506537 TMEM132BQ14DG7 1078 aa21.47■■□□□ 1.03
PDLIM7-216ENST00000506537 CREB3L3Q68CJ9 461 aa21.47■■□□□ 1.03
PDLIM7-216ENST00000506537 IQCA1Q86XH1 822 aa21.47■■□□□ 1.03
PDLIM7-216ENST00000506537 TTC14Q96N46 770 aa21.47■■□□□ 1.03
PDLIM7-216ENST00000506537 TNKSO95271 1327 aa21.47■■□□□ 1.03
PDLIM7-216ENST00000506537 MAPK4P31152 587 aa21.46■■□□□ 1.03
PDLIM7-216ENST00000506537 FLT3LGP49771 235 aa21.46■■□□□ 1.03
PDLIM7-216ENST00000506537 COL9A3Q14050 684 aaPredicted RBP21.46■■□□□ 1.03
PDLIM7-216ENST00000506537 KCTD1Q719H9 257 aa21.46■■□□□ 1.03
PDLIM7-216ENST00000506537 DGKHQ86XP1 1220 aa21.46■■□□□ 1.03
PDLIM7-216ENST00000506537 ANKS1AQ92625 1134 aa21.46■■□□□ 1.03
PDLIM7-216ENST00000506537 COA7Q96BR5 231 aa21.46■■□□□ 1.03
PDLIM7-216ENST00000506537 MOV10L1Q9BXT6 1211 aaKnown RBP21.46■■□□□ 1.03
PDLIM7-216ENST00000506537 SPATC1LQ9H0A9 340 aa21.46■■□□□ 1.03
PDLIM7-216ENST00000506537 FEM1BQ9UK73 627 aa21.46■■□□□ 1.03
PDLIM7-216ENST00000506537 GJD2Q9UKL4 321 aa21.46■■□□□ 1.03
PDLIM7-216ENST00000506537 TMEM232C9JQI7 657 aa21.45■■□□□ 1.02
PDLIM7-216ENST00000506537 CCNA1P78396 465 aa21.45■■□□□ 1.02
PDLIM7-216ENST00000506537 TRDNQ13061 729 aa21.45■■□□□ 1.02
PDLIM7-216ENST00000506537 SEC23AQ15436 765 aa21.45■■□□□ 1.02
PDLIM7-216ENST00000506537 GPR142Q7Z601 462 aa21.45■■□□□ 1.02
PDLIM7-216ENST00000506537 MB21D2Q8IYB1 491 aaPredicted RBP21.45■■□□□ 1.02
PDLIM7-216ENST00000506537 DCAF4Q8WV16 495 aa21.45■■□□□ 1.02
PDLIM7-216ENST00000506537 ZNF214Q9UL59 606 aaPredicted RBP21.45■■□□□ 1.02
PDLIM7-216ENST00000506537 SNHG28P0DPA3 235 aa21.44■■□□□ 1.02
PDLIM7-216ENST00000506537 PDHBP11177 359 aa21.44■■□□□ 1.02
PDLIM7-216ENST00000506537 ANTXR2P58335 489 aa21.44■■□□□ 1.02
PDLIM7-216ENST00000506537 CCDC178Q5BJE1 867 aa21.44■■□□□ 1.02
PDLIM7-216ENST00000506537 RALYLQ86SE5 291 aaKnown RBP21.44■■□□□ 1.02
PDLIM7-216ENST00000506537 PRPF38AQ8NAV1 312 aaKnown RBP21.44■■□□□ 1.02
PDLIM7-216ENST00000506537 NCOA7Q8NI08 942 aa21.44■■□□□ 1.02
PDLIM7-216ENST00000506537 KIFC2Q96AC6 838 aa21.44■■□□□ 1.02
PDLIM7-216ENST00000506537 ARMC5Q96C12 935 aa21.44■■□□□ 1.02
PDLIM7-216ENST00000506537 UBAC1Q9BSL1 405 aa21.44■■□□□ 1.02
PDLIM7-216ENST00000506537 ISY1Q9ULR0 285 aaKnown RBP21.44■■□□□ 1.02
PDLIM7-216ENST00000506537 STAT2P52630 851 aa21.43■■□□□ 1.02
PDLIM7-216ENST00000506537 PLS1Q14651 629 aa21.43■■□□□ 1.02
PDLIM7-216ENST00000506537 CCDC96Q2M329 555 aa21.43■■□□□ 1.02
PDLIM7-216ENST00000506537 MORN1Q5T089 497 aa21.43■■□□□ 1.02
PDLIM7-216ENST00000506537 PLEKHH3Q7Z736 793 aa21.43■■□□□ 1.02
PDLIM7-216ENST00000506537 RAET1EQ8TD07 263 aa21.43■■□□□ 1.02
PDLIM7-216ENST00000506537 SH3TC2Q8TF17 1288 aa21.43■■□□□ 1.02
PDLIM7-216ENST00000506537 FRMPD2Q68DX3 1309 aaPredicted RBP21.43■■□□□ 1.02
PDLIM7-216ENST00000506537 PLA2G6O60733 806 aa21.42■■□□□ 1.02
PDLIM7-216ENST00000506537 ERCC3P19447 782 aa21.42■■□□□ 1.02
PDLIM7-216ENST00000506537 IRF5Q13568 498 aa21.42■■□□□ 1.02
PDLIM7-216ENST00000506537 SLC9C1Q4G0N8 1177 aa21.42■■□□□ 1.02
PDLIM7-216ENST00000506537 TTBK2Q6IQ55 1244 aa21.42■■□□□ 1.02
PDLIM7-216ENST00000506537 CHST3Q7LGC8 479 aa21.42■■□□□ 1.02
PDLIM7-216ENST00000506537 FAM160B2Q86V87 743 aa21.42■■□□□ 1.02
PDLIM7-216ENST00000506537 CCAR1Q8IX12 1150 aaKnown RBP21.42■■□□□ 1.02
PDLIM7-216ENST00000506537 PNMA1Q8ND90 353 aa21.42■■□□□ 1.02
PDLIM7-216ENST00000506537 SHCBP1Q8NEM2 672 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms