RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 FGRP09769 529 aa18.41■□□□□ 0.54
MED28-204ENST00000506409 PPP4R3BQ5MIZ7 849 aa18.41■□□□□ 0.54
MED28-204ENST00000506409 MOV10L1Q9BXT6 1211 aaKnown RBP18.41■□□□□ 0.54
MED28-204ENST00000506409 SPATC1LQ9H0A9 340 aa18.41■□□□□ 0.54
MED28-204ENST00000506409 RNF208Q9H0X6 261 aa18.41■□□□□ 0.54
MED28-204ENST00000506409 TACC3Q9Y6A5 838 aa18.41■□□□□ 0.54
MED28-204ENST00000506409 IVNS1ABPQ9Y6Y0 642 aa18.41■□□□□ 0.54
MED28-204ENST00000506409 PLXNB2O15031 1838 aa18.41■□□□□ 0.54
MED28-204ENST00000506409 PARP14Q460N5 1801 aa18.4■□□□□ 0.54
MED28-204ENST00000506409 HMGCRP04035 888 aa18.4■□□□□ 0.54
MED28-204ENST00000506409 XRCC5P13010 732 aaKnown RBP18.4■□□□□ 0.54
MED28-204ENST00000506409 RGS2P41220 211 aa18.4■□□□□ 0.54
MED28-204ENST00000506409 PLS1Q14651 629 aa18.4■□□□□ 0.54
MED28-204ENST00000506409 RRP12Q5JTH9 1297 aaKnown RBP18.4■□□□□ 0.54
MED28-204ENST00000506409 MORN1Q5T089 497 aa18.4■□□□□ 0.54
MED28-204ENST00000506409 GMCL1P1Q8NEA9 526 aa18.4■□□□□ 0.54
MED28-204ENST00000506409 PPP1R9AQ9ULJ8 1098 aa18.4■□□□□ 0.54
MED28-204ENST00000506409 STX8Q9UNK0 236 aa18.4■□□□□ 0.54
MED28-204ENST00000506409 NMT2O60551 498 aa18.39■□□□□ 0.53
MED28-204ENST00000506409 TRIB2Q92519 343 aa18.39■□□□□ 0.53
MED28-204ENST00000506409 USP6NLQ92738 828 aa18.39■□□□□ 0.53
MED28-204ENST00000506409 APBA2Q99767 749 aa18.39■□□□□ 0.53
MED28-204ENST00000506409 SLF1Q9BQI6 1058 aa18.39■□□□□ 0.53
MED28-204ENST00000506409 DSCC1Q9BVC3 393 aa18.39■□□□□ 0.53
MED28-204ENST00000506409 UNC93B1Q9H1C4 597 aa18.39■□□□□ 0.53
MED28-204ENST00000506409 IL17RBQ9NRM6 502 aa18.39■□□□□ 0.53
MED28-204ENST00000506409 ADAMTS5Q9UNA0 930 aa18.39■□□□□ 0.53
MED28-204ENST00000506409 SLC15A5A6NIM6 579 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 VWA5AO00534 786 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 ZNF213O14771 459 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 GJB1P08034 283 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 PCP11498 1178 aaKnown RBP18.38■□□□□ 0.53
MED28-204ENST00000506409 ERCC3P19447 782 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 PTPREP23469 700 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 MAP2K5Q13163 448 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 TMEM132BQ14DG7 1078 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 AKNAD1Q5T1N1 836 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 SLFN13Q68D06 897 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 MFSD6Q6ZSS7 791 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 CENPQQ7L2Z9 268 aaPredicted RBP18.38■□□□□ 0.53
MED28-204ENST00000506409 TBC1D10CQ8IV04 446 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 TRMT44Q8IYL2 757 aaKnown RBP18.38■□□□□ 0.53
MED28-204ENST00000506409 SHCBP1Q8NEM2 672 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 NKX2-3Q8TAU0 364 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 NBPF3Q9H094 633 aa18.38■□□□□ 0.53
MED28-204ENST00000506409 RNF41Q9H4P4 317 aaPredicted RBP18.38■□□□□ 0.53
MED28-204ENST00000506409 ZKSCAN1P17029 563 aaPredicted RBP18.37■□□□□ 0.53
MED28-204ENST00000506409 GRB14Q14449 540 aa18.37■□□□□ 0.53
MED28-204ENST00000506409 NCAPG2Q86XI2 1143 aa18.37■□□□□ 0.53
MED28-204ENST00000506409 STAG1Q8WVM7 1258 aa18.37■□□□□ 0.53
MED28-204ENST00000506409 RUFY2Q8WXA3 655 aa18.37■□□□□ 0.53
MED28-204ENST00000506409 IL25Q9H293 177 aa18.37■□□□□ 0.53
MED28-204ENST00000506409 MROH8Q9H579 483 aa18.37■□□□□ 0.53
MED28-204ENST00000506409 ISY1Q9ULR0 285 aaKnown RBP18.37■□□□□ 0.53
MED28-204ENST00000506409 RAD50Q92878 1312 aa18.37■□□□□ 0.53
MED28-204ENST00000506409 STRNO43815 780 aa18.36■□□□□ 0.53
MED28-204ENST00000506409 BMP3P12645 472 aa18.36■□□□□ 0.53
MED28-204ENST00000506409 CHMLP26374 656 aa18.36■□□□□ 0.53
MED28-204ENST00000506409 GJA8P48165 433 aa18.36■□□□□ 0.53
MED28-204ENST00000506409 PRPF38AQ8NAV1 312 aaKnown RBP18.36■□□□□ 0.53
MED28-204ENST00000506409 CTNNA3Q9UI47 895 aa18.36■□□□□ 0.53
MED28-204ENST00000506409 TNRC18O15417 2968 aaPredicted RBP18.36■□□□□ 0.53
MED28-204ENST00000506409 COL11A1P12107 1806 aaPredicted RBP18.35■□□□□ 0.53
MED28-204ENST00000506409 MKI67P46013 3256 aaKnown RBP18.35■□□□□ 0.53
MED28-204ENST00000506409 NEDD4P46934 1319 aa18.35■□□□□ 0.53
MED28-204ENST00000506409 SLC25A27O95847 323 aa18.35■□□□□ 0.53
MED28-204ENST00000506409 STAT3P40763 770 aa18.35■□□□□ 0.53
MED28-204ENST00000506409 TRIM32Q13049 653 aa18.35■□□□□ 0.53
MED28-204ENST00000506409 CCL14Q16627 93 aa18.35■□□□□ 0.53
MED28-204ENST00000506409 IMMTQ16891 758 aaKnown RBP18.35■□□□□ 0.53
MED28-204ENST00000506409 REPS2Q8NFH8 660 aa18.35■□□□□ 0.53
MED28-204ENST00000506409 U2AF1L4Q8WU68 220 aaKnown RBP18.35■□□□□ 0.53
MED28-204ENST00000506409 KIFC2Q96AC6 838 aa18.35■□□□□ 0.53
MED28-204ENST00000506409 SHISA4Q96DD7 197 aa18.35■□□□□ 0.53
MED28-204ENST00000506409 GMCL1Q96IK5 515 aa18.35■□□□□ 0.53
MED28-204ENST00000506409 PAK6Q9NQU5 681 aaPredicted RBP18.35■□□□□ 0.53
MED28-204ENST00000506409 FEM1BQ9UK73 627 aa18.35■□□□□ 0.53
MED28-204ENST00000506409 ZNF214Q9UL59 606 aaPredicted RBP18.35■□□□□ 0.53
MED28-204ENST00000506409 LAMA4Q16363 1823 aa18.35■□□□□ 0.53
MED28-204ENST00000506409 RPTORQ8N122 1335 aa18.34■□□□□ 0.53
MED28-204ENST00000506409 HOXC6P09630 235 aa18.34■□□□□ 0.53
MED28-204ENST00000506409 PRKAR2AP13861 404 aaKnown RBP18.34■□□□□ 0.53
MED28-204ENST00000506409 MCCP23508 829 aa18.34■□□□□ 0.53
MED28-204ENST00000506409 ADORA2AP29274 412 aa18.34■□□□□ 0.53
MED28-204ENST00000506409 SLC1A4P43007 532 aa18.34■□□□□ 0.53
MED28-204ENST00000506409 NOVP48745 357 aa18.34■□□□□ 0.53
MED28-204ENST00000506409 RIOX2Q8IUF8 465 aa18.34■□□□□ 0.53
MED28-204ENST00000506409 ESR2Q92731 530 aa18.34■□□□□ 0.53
MED28-204ENST00000506409 CHMP4CQ96CF2 233 aa18.34■□□□□ 0.53
MED28-204ENST00000506409 DEFB118Q96PH6 123 aa18.34■□□□□ 0.53
MED28-204ENST00000506409 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.34■□□□□ 0.53
MED28-204ENST00000506409 HMX1Q9NP08 348 aaPredicted RBP18.34■□□□□ 0.53
MED28-204ENST00000506409 TCP11L1Q9NUJ3 509 aa18.34■□□□□ 0.53
MED28-204ENST00000506409 CTDP1Q9Y5B0 961 aaPredicted RBP18.34■□□□□ 0.53
MED28-204ENST00000506409 PDE4DIPQ5VU43 2346 aa18.33■□□□□ 0.53
MED28-204ENST00000506409 TMEM232C9JQI7 657 aa18.33■□□□□ 0.52
MED28-204ENST00000506409 ZBED4O75132 1171 aa18.33■□□□□ 0.52
MED28-204ENST00000506409 SGPL1O95470 568 aa18.33■□□□□ 0.52
MED28-204ENST00000506409 COPB2P35606 906 aa18.33■□□□□ 0.52
MED28-204ENST00000506409 STAT2P52630 851 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms