RNA–Protein interactions for RNA: ENST00000506351.6

TNPO1-204, Transcript of transportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-204ENST00000506351 USP40Q9NVE5 1235 aa8.34□□□□□ -1.07
TNPO1-204ENST00000506351 CLIP2Q9UDT6 1046 aa8.34□□□□□ -1.07
TNPO1-204ENST00000506351 HOOK1Q9UJC3 728 aaKnown RBP8.34□□□□□ -1.07
TNPO1-204ENST00000506351 BRCA1P38398 1863 aaKnown RBP8.34□□□□□ -1.07
TNPO1-204ENST00000506351 IGKV6D-41A0A0C4DH26 115 aa8.34□□□□□ -1.07
TNPO1-204ENST00000506351 ECE2O60344 883 aa8.34□□□□□ -1.07
TNPO1-204ENST00000506351 PARP1P09874 1014 aaKnown RBP8.34□□□□□ -1.07
TNPO1-204ENST00000506351 GOLGA8HP0CJ92 632 aa8.34□□□□□ -1.07
TNPO1-204ENST00000506351 CRKP46108 304 aa8.34□□□□□ -1.07
TNPO1-204ENST00000506351 NCAPHQ15003 741 aa8.34□□□□□ -1.07
TNPO1-204ENST00000506351 POSTNQ15063 836 aa8.34□□□□□ -1.07
TNPO1-204ENST00000506351 USP49Q70CQ1 688 aa8.34□□□□□ -1.07
TNPO1-204ENST00000506351 DRC7Q8IY82 874 aa8.34□□□□□ -1.07
TNPO1-204ENST00000506351 FAM177A1Q8N128 213 aaPredicted RBP8.34□□□□□ -1.07
TNPO1-204ENST00000506351 CAMKK2Q96RR4 588 aa8.34□□□□□ -1.07
TNPO1-204ENST00000506351 BARHL2Q9NY43 387 aa8.34□□□□□ -1.07
TNPO1-204ENST00000506351 SWAP70Q9UH65 585 aa8.34□□□□□ -1.07
TNPO1-204ENST00000506351 A0A087X0B3 334 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 KLRF2D3W0D1 207 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 IKBKBO14920 756 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 AKR1B1P15121 316 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 CHRNA5P30532 468 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 ISM2Q6H9L7 571 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 APOBEC3HQ6NTF7 200 aaKnown RBP8.33□□□□□ -1.08
TNPO1-204ENST00000506351 HEATR3Q7Z4Q2 680 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 SYMPKQ92797 1274 aaKnown RBP8.33□□□□□ -1.08
TNPO1-204ENST00000506351 KCNQ5Q9NR82 932 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 STK32BQ9NY57 414 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 RGS17Q9UGC6 210 aaPredicted RBP8.33□□□□□ -1.08
TNPO1-204ENST00000506351 NRBP1Q9UHY1 535 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 PCDHA5Q9Y5H7 936 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 SMTNL1A8MU46 457 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 PTGDRQ13258 359 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 NT5DC1Q5TFE4 455 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 GALNT17Q6IS24 598 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 CCDC186Q7Z3E2 898 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 FOXP4Q8IVH2 680 aaPredicted RBP8.33□□□□□ -1.08
TNPO1-204ENST00000506351 CNKSR1Q969H4 720 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 ZDHHC15Q96MV8 337 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 MAN1B1Q9UKM7 699 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 PYCARDQ9ULZ3 195 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 PCDHA6Q9UN73 950 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 PCDHA8Q9Y5H6 950 aa8.33□□□□□ -1.08
TNPO1-204ENST00000506351 SMARCA1P28370 1054 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 SHMT1P34896 483 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 TPM4P67936 248 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 EN1Q05925 392 aaPredicted RBP8.32□□□□□ -1.08
TNPO1-204ENST00000506351 CCDC144BQ3MJ40 725 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 DACT2Q5SW24 774 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 STRIP1Q5VSL9 837 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 KANK3Q6NY19 840 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 USP17L2Q6R6M4 530 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 GRAMD1CQ8IYS0 662 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 PDILTQ8N807 584 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 RASGRP4Q8TDF6 673 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 EPSTI1Q96J88 318 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 CPVLQ9H3G5 476 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 MTMR4Q9NYA4 1195 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 SERPINB13Q9UIV8 391 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 ATAD5Q96QE3 1844 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 USP17L5A8MUK1 530 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 PDHBP11177 359 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 MCM7P33993 719 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 POTEAQ6S8J7 498 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 LRRC47Q8N1G4 583 aaKnown RBP8.32□□□□□ -1.08
TNPO1-204ENST00000506351 C7orf43Q8WVR3 580 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 DHX58Q96C10 678 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 NAP1L5Q96NT1 182 aaPredicted RBP8.32□□□□□ -1.08
TNPO1-204ENST00000506351 EHD4Q9H223 541 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 HSD3B7Q9H2F3 369 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 SPTLC3Q9NUV7 552 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 ZNF219Q9P2Y4 722 aaPredicted RBP8.32□□□□□ -1.08
TNPO1-204ENST00000506351 VWA3AA6NCI4 1184 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 HLA-DOAP06340 250 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 BMP6P22004 513 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 SARSP49591 514 aaKnown RBP8.32□□□□□ -1.08
TNPO1-204ENST00000506351 MYL5Q02045 173 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 NFIAQ12857 509 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 ASPRV1Q53RT3 343 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 C17orf53Q8N3J3 647 aaPredicted RBP8.32□□□□□ -1.08
TNPO1-204ENST00000506351 KIAA1524Q8TCG1 905 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 SMARCE1Q969G3 411 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 RRP36Q96EU6 259 aaKnown RBP8.32□□□□□ -1.08
TNPO1-204ENST00000506351 PCDHAC2Q9Y5I4 1007 aa8.32□□□□□ -1.08
TNPO1-204ENST00000506351 CCDC194A0A1B0GVG4 234 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 SNHG28P0DPA3 235 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 NAPAP54920 295 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 HDLBPQ00341 1268 aaKnown RBP8.31□□□□□ -1.08
TNPO1-204ENST00000506351 MORC3Q14149 939 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 IL17AQ16552 155 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 AOC3Q16853 763 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 FER1L6Q2WGJ9 1857 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 ARL6IP4Q66PJ3 421 aaKnown RBP8.31□□□□□ -1.08
TNPO1-204ENST00000506351 SH3RF1Q7Z6J0 888 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 CLEC10AQ8IUN9 316 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 KIAA0825Q8IV33 1275 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 C4orf32Q8N8J7 132 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 TRIML1Q8N9V2 468 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 CCDC12Q8WUD4 166 aaPredicted RBP8.31□□□□□ -1.08
TNPO1-204ENST00000506351 MRIQ9BWK5 157 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms