RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 PTPRFP10586 1907 aa11.52□□□□□ -0.57
TRIM6-208ENST00000506134 CCDC69A6NI79 296 aa11.51□□□□□ -0.57
TRIM6-208ENST00000506134 PDHXO00330 501 aa11.51□□□□□ -0.57
TRIM6-208ENST00000506134 PDHBP11177 359 aa11.51□□□□□ -0.57
TRIM6-208ENST00000506134 APOBRQ0VD83 1088 aa11.51□□□□□ -0.57
TRIM6-208ENST00000506134 SREBF2Q12772 1141 aa11.51□□□□□ -0.57
TRIM6-208ENST00000506134 CATSPERGQ6ZRH7 1159 aa11.51□□□□□ -0.57
TRIM6-208ENST00000506134 ANKRD23Q86SG2 305 aa11.51□□□□□ -0.57
TRIM6-208ENST00000506134 SGMS1Q86VZ5 419 aa11.51□□□□□ -0.57
TRIM6-208ENST00000506134 FBXL16Q8N461 479 aa11.51□□□□□ -0.57
TRIM6-208ENST00000506134 LPAR1Q92633 364 aa11.51□□□□□ -0.57
TRIM6-208ENST00000506134 MYL10Q9BUA6 226 aa11.51□□□□□ -0.57
TRIM6-208ENST00000506134 ALDH8A1Q9H2A2 487 aaPredicted RBP11.51□□□□□ -0.57
TRIM6-208ENST00000506134 RPAP3Q9H6T3 665 aaPredicted RBP11.51□□□□□ -0.57
TRIM6-208ENST00000506134 GPCPD1Q9NPB8 672 aa11.51□□□□□ -0.57
TRIM6-208ENST00000506134 AGTPBP1Q9UPW5 1226 aa11.51□□□□□ -0.57
TRIM6-208ENST00000506134 FRMPD2Q68DX3 1309 aaPredicted RBP11.5□□□□□ -0.57
TRIM6-208ENST00000506134 USP17L15C9J2P7 530 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 USP17L13C9JLJ4 530 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 USP17L11C9JVI0 530 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 USP17L18D6R9N7 530 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 USP17L22D6RA61 530 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 USP17L17D6RBQ6 530 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 USP17L19D6RCP7 530 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 USP17L20D6RJB6 530 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 WDR46O15213 610 aaKnown RBP11.5□□□□□ -0.57
TRIM6-208ENST00000506134 GOLGA8HP0CJ92 632 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 SNHG28P0DPA3 235 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 BMP3P12645 472 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 RXRAP19793 462 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 HOXA7P31268 230 aaPredicted RBP11.5□□□□□ -0.57
TRIM6-208ENST00000506134 SLC1A4P43007 532 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRIM6-208ENST00000506134 AK2P54819 239 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 USP17L24Q0WX57 530 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 TROAPQ12815 778 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 TTBK2Q6IQ55 1244 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 KCTD1Q719H9 257 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 CATIPQ7Z7H3 387 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 ZNF654Q8IZM8 581 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 SPDYE1Q8NFV5 336 aaPredicted RBP11.5□□□□□ -0.57
TRIM6-208ENST00000506134 NUP133Q8WUM0 1156 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 DCAF4Q8WV16 495 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 GMCL1Q96IK5 515 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 SLC12A7Q9Y666 1083 aa11.5□□□□□ -0.57
TRIM6-208ENST00000506134 KLF18A0A0U1RQI7 1052 aa11.49□□□□□ -0.57
TRIM6-208ENST00000506134 TMEM232C9JQI7 657 aa11.49□□□□□ -0.57
TRIM6-208ENST00000506134 CYP2C8P10632 490 aa11.49□□□□□ -0.57
TRIM6-208ENST00000506134 EVCP57679 992 aa11.49□□□□□ -0.57
TRIM6-208ENST00000506134 RABEP1Q15276 862 aa11.49□□□□□ -0.57
TRIM6-208ENST00000506134 CCDC96Q2M329 555 aa11.49□□□□□ -0.57
TRIM6-208ENST00000506134 APOA5Q6Q788 366 aa11.49□□□□□ -0.57
TRIM6-208ENST00000506134 SYNE3Q6ZMZ3 975 aa11.49□□□□□ -0.57
TRIM6-208ENST00000506134 CCDC144CPQ8IYA2 1237 aa11.49□□□□□ -0.57
TRIM6-208ENST00000506134 STAG2Q8N3U4 1231 aa11.49□□□□□ -0.57
TRIM6-208ENST00000506134 P2RX7Q99572 595 aaKnown RBP11.49□□□□□ -0.57
TRIM6-208ENST00000506134 TANGO6Q9C0B7 1094 aa11.49□□□□□ -0.57
TRIM6-208ENST00000506134 ASCC2Q9H1I8 757 aaPredicted RBP11.49□□□□□ -0.57
TRIM6-208ENST00000506134 FBXO28Q9NVF7 368 aa11.49□□□□□ -0.57
TRIM6-208ENST00000506134 ISY1Q9ULR0 285 aaKnown RBP11.49□□□□□ -0.57
TRIM6-208ENST00000506134 NAP1L2Q9ULW6 460 aaPredicted RBP11.49□□□□□ -0.57
TRIM6-208ENST00000506134 PALM3A6NDB9 673 aaPredicted RBP11.48□□□□□ -0.57
TRIM6-208ENST00000506134 SPDYE4A6NLX3 237 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 PARP1P09874 1014 aaKnown RBP11.48□□□□□ -0.57
TRIM6-208ENST00000506134 OSBPP22059 807 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 PDIA3P30101 505 aaKnown RBP11.48□□□□□ -0.57
TRIM6-208ENST00000506134 SLC16A2P36021 539 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 ZNF543Q08ER8 600 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 COG2Q14746 738 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 GRM4Q14833 912 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 OTUD7BQ6GQQ9 843 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 POTEEQ6S8J3 1075 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 NOL8Q76FK4 1167 aaKnown RBP11.48□□□□□ -0.57
TRIM6-208ENST00000506134 FANCBQ8NB91 859 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 UBA5Q9GZZ9 404 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 CPVLQ9H3G5 476 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 RNF186Q9NXI6 227 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 MAD2L2Q9UI95 211 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 TPCN1Q9ULQ1 816 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 HPS5Q9UPZ3 1129 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 SLC45A1Q9Y2W3 748 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 LOC285556D6RIA3 1793 aa11.48□□□□□ -0.57
TRIM6-208ENST00000506134 ZBTB43O43298 467 aa11.47□□□□□ -0.57
TRIM6-208ENST00000506134 PEX10O60683 326 aa11.47□□□□□ -0.57
TRIM6-208ENST00000506134 FLOT1O75955 427 aa11.47□□□□□ -0.57
TRIM6-208ENST00000506134 DDAH1O94760 285 aa11.47□□□□□ -0.57
TRIM6-208ENST00000506134 CALM1P0DP23 149 aa11.47□□□□□ -0.57
TRIM6-208ENST00000506134 CALM2P0DP24 149 aa11.47□□□□□ -0.57
TRIM6-208ENST00000506134 CALM3P0DP25 149 aa11.47□□□□□ -0.57
TRIM6-208ENST00000506134 IRX3P78415 501 aaPredicted RBP11.47□□□□□ -0.57
TRIM6-208ENST00000506134 PABPC4Q13310 644 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRIM6-208ENST00000506134 ANKRD1Q15327 319 aa11.47□□□□□ -0.57
TRIM6-208ENST00000506134 MICU3Q86XE3 530 aa11.47□□□□□ -0.57
TRIM6-208ENST00000506134 R3HDMLQ9H3Y0 253 aa11.47□□□□□ -0.57
TRIM6-208ENST00000506134 FAM217BQ9NTX9 383 aaPredicted RBP11.47□□□□□ -0.57
TRIM6-208ENST00000506134 HOXC10Q9NYD6 342 aa11.47□□□□□ -0.57
TRIM6-208ENST00000506134 FEM1BQ9UK73 627 aa11.47□□□□□ -0.57
TRIM6-208ENST00000506134 KLRF2D3W0D1 207 aa11.46□□□□□ -0.57
TRIM6-208ENST00000506134 TRPA1O75762 1119 aa11.46□□□□□ -0.57
TRIM6-208ENST00000506134 CD2BP2O95400 341 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms