RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 ATP8A2Q9NTI2 1148 aa8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 CACNA1SQ13698 1873 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 ORC4O43929 436 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 MFAP3LO75121 409 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 GYPCP04921 128 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 PBX1P40424 430 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 KRT31Q15323 416 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 PDXDC2PQ6P474 469 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 TXNRD3Q86VQ6 643 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 STAG2Q8N3U4 1231 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 RASSF8Q8NHQ8 419 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 NLRP3Q96P20 1036 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 NUP88Q99567 741 aaPredicted RBP8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 NAA15Q9BXJ9 866 aaKnown RBP8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 THRAP3Q9Y2W1 955 aaKnown RBP8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 KIF5CO60282 957 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 ZRANB2O95218 330 aaKnown RBP eCLIP8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 KIF5BP33176 963 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 PLA2G4AP47712 749 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 PAK1Q13153 545 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 ZNF569Q5MCW4 686 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 RCSD1Q6JBY9 416 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 NBPF5PQ86XG9 351 aaPredicted RBP8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 DZIP1Q86YF9 867 aaKnown RBP8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 BLIDQ8IZY5 108 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 GPR161Q8N6U8 529 aaKnown RBP8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 NELFBQ8WX92 580 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 SMARCC1Q92922 1105 aaPredicted RBP8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 DYNLL2Q96FJ2 89 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 SETDB2Q96T68 719 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 PLIN2Q99541 437 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 PARD6BQ9BYG5 372 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 TAB2Q9NYJ8 693 aa8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 ARPP21Q9UBL0 812 aaPredicted RBP8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 SRP68Q9UHB9 627 aaKnown RBP8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 PUF60Q9UHX1 559 aaKnown RBP8.62□□□□□ -1.03
PPARGC1A-204ENST00000506055 RNF225M0QZC1 329 aaPredicted RBP8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 PES1O00541 588 aaKnown RBP8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 SEMA3EO15041 775 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 ABL1P00519 1130 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 RPN1P04843 607 aaKnown RBP8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 STAT6P42226 847 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 USP5P45974 858 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 TRAPPC10P48553 1259 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 CNGA4Q8IV77 575 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 ACRBPQ8NEB7 543 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 MKNK2Q9HBH9 465 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 IL17RBQ9NRM6 502 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 RWDD2AQ9UIY3 292 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 GDAQ9Y2T3 454 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 PP2D1A8MPX8 630 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 KCNJ18B7U540 433 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 POLR3GO15318 223 aaPredicted RBP8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 GTPBP6O43824 516 aaPredicted RBP8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 TXLNAP40222 546 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 PRCPP42785 496 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 UBXN1Q04323 297 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 KCNJ12Q14500 433 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 TCP11X2Q5H9J9 407 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 ZNF658Q5TYW1 1059 aaPredicted RBP8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 PNMA1Q8ND90 353 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 ANKRD20A12PQ8NF67 263 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 GOLGA1Q92805 767 aa8.61□□□□□ -1.03
PPARGC1A-204ENST00000506055 FAM205AQ6ZU69 1335 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 CCDC194A0A1B0GVG4 234 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 USP17L3A6NCW0 530 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 USP17L4A6NCW7 530 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 ERICH4A6NGS2 130 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 CALML3P27482 149 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 KIF4BQ2VIQ3 1234 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 CC2D1AQ6P1N0 951 aaPredicted RBP8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 RSRC2Q7L4I2 434 aaKnown RBP8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 RASGRP2Q7LDG7 609 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 PTF1AQ7RTS3 328 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 USP17L1Q7RTZ2 530 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 HEATR3Q7Z4Q2 680 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 SLC51AQ86UW1 340 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 C4orf32Q8N8J7 132 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 EEF2KMTQ96G04 330 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 ANKIB1Q9P2G1 1089 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 PCDHA4Q9UN74 947 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 COL16A1Q07092 1604 aaPredicted RBP8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 TRIM49BA6NDI0 452 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 LRRC10BA6NIK2 292 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 SASH3O75995 380 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 TSPY3P0CV98 308 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 TSPY8P0CW00 308 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 LONP1P36776 959 aaKnown RBP8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 COPB1P53618 953 aaKnown RBP8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 CHMP4BP1P59074 171 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 FAM98CQ17RN3 349 aaKnown RBP8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 SBK1Q52WX2 424 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 SLC10A5Q5PT55 438 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 ARL6IP4Q66PJ3 421 aaKnown RBP8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 TYW1BQ6NUM6 668 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 DTHD1Q6ZMT9 781 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 RABGGTAQ92696 567 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 ZBTB9Q96C00 473 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 PYM1Q9BRP8 204 aaKnown RBP8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 ANKRD2Q9GZV1 360 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms