RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 MCMDC2Q4G0Z9 681 aa14.87□□□□□ -0.03
LETM1-203ENST00000505551 PAPD7Q5XG87 772 aaKnown RBP14.87□□□□□ -0.03
LETM1-203ENST00000505551 PARP9Q8IXQ6 854 aa14.87□□□□□ -0.03
LETM1-203ENST00000505551 FBXL16Q8N461 479 aa14.87□□□□□ -0.03
LETM1-203ENST00000505551 NUCKS1Q9H1E3 243 aaKnown RBP14.87□□□□□ -0.03
LETM1-203ENST00000505551 EPN3Q9H201 632 aa14.87□□□□□ -0.03
LETM1-203ENST00000505551 CWC25Q9NXE8 425 aaPredicted RBP14.87□□□□□ -0.03
LETM1-203ENST00000505551 FOXN1O15353 648 aa14.87□□□□□ -0.03
LETM1-203ENST00000505551 GYPCP04921 128 aa14.87□□□□□ -0.03
LETM1-203ENST00000505551 CASP14P31944 242 aa14.87□□□□□ -0.03
LETM1-203ENST00000505551 RFX5P48382 616 aaPredicted RBP14.87□□□□□ -0.03
LETM1-203ENST00000505551 CDR1P51861 262 aa14.87□□□□□ -0.03
LETM1-203ENST00000505551 RCSD1Q6JBY9 416 aa14.87□□□□□ -0.03
LETM1-203ENST00000505551 SDR16C5Q8N3Y7 309 aa14.87□□□□□ -0.03
LETM1-203ENST00000505551 MAB21L3Q8N8X9 362 aa14.87□□□□□ -0.03
LETM1-203ENST00000505551 DBNDD2Q9BQY9 259 aa14.87□□□□□ -0.03
LETM1-203ENST00000505551 DBNLQ9UJU6 430 aaKnown RBP14.87□□□□□ -0.03
LETM1-203ENST00000505551 PDHBP11177 359 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 SARSP49591 514 aaKnown RBP14.86□□□□□ -0.03
LETM1-203ENST00000505551 KIRREL3Q8IZU9 778 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 ARMC2Q8NEN0 867 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 ARL8AQ96BM9 186 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 ADD3Q9UEY8 706 aaKnown RBP14.86□□□□□ -0.03
LETM1-203ENST00000505551 KCNH3Q9ULD8 1083 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 SAR1BQ9Y6B6 198 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 ITIH6Q6UXX5 1313 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 LSP1P33241 339 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 FXR1P51114 621 aaKnown RBP eCLIP14.86□□□□□ -0.03
LETM1-203ENST00000505551 SETDB1Q15047 1291 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 LRRC24Q50LG9 513 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 SLC9C2Q5TAH2 1124 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 C6orf89Q6UWU4 347 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 CEP57Q86XR8 500 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 ZNF473Q8WTR7 871 aaKnown RBP14.86□□□□□ -0.03
LETM1-203ENST00000505551 RUBCNQ92622 972 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 CENPHQ9H3R5 247 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 ACTR5Q9H9F9 607 aaPredicted RBP14.86□□□□□ -0.03
LETM1-203ENST00000505551 HDAC6Q9UBN7 1215 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 ERCC5P28715 1186 aaPredicted RBP14.86□□□□□ -0.03
LETM1-203ENST00000505551 PLCD1P51178 756 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 CASP7P55210 303 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 FOXO4P98177 505 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 EMC10Q5UCC4 262 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 CYB5D1Q6P9G0 228 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 SND1Q7KZF4 910 aaKnown RBP eCLIP14.86□□□□□ -0.03
LETM1-203ENST00000505551 TRIML1Q8N9V2 468 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 PUS3Q9BZE2 481 aaKnown RBP14.86□□□□□ -0.03
LETM1-203ENST00000505551 ADAMTS7Q9UKP4 1686 aa14.86□□□□□ -0.03
LETM1-203ENST00000505551 ATP5JP18859 108 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 PDE6BP35913 854 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 RHBDL3P58872 404 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 ZRSR2Q15696 482 aaKnown RBP14.85□□□□□ -0.03
LETM1-203ENST00000505551 RNF187Q5TA31 235 aaPredicted RBP14.85□□□□□ -0.03
LETM1-203ENST00000505551 ALS2CLQ60I27 953 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 KDM7AQ6ZMT4 941 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 APBB1IPQ7Z5R6 666 aaPredicted RBP14.85□□□□□ -0.03
LETM1-203ENST00000505551 FUKQ8N0W3 1084 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 SH3GL3Q99963 347 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 GJB4Q9NTQ9 266 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 IRAK4Q9NWZ3 460 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 E7EWF7 191 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 SKAP2O75563 359 aaPredicted RBP14.85□□□□□ -0.03
LETM1-203ENST00000505551 ECEL1O95672 775 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 ATP1A1P05023 1023 aaKnown RBP14.85□□□□□ -0.03
LETM1-203ENST00000505551 POSTNQ15063 836 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 HLFQ16534 295 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 TNNI3KQ59H18 835 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 CYP26C1Q6V0L0 522 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 RRP36Q96EU6 259 aaKnown RBP14.85□□□□□ -0.03
LETM1-203ENST00000505551 SLC4A9Q96Q91 983 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 MAP3K14Q99558 947 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 ETAA1Q9NY74 926 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 TPX2Q9ULW0 747 aaKnown RBP14.85□□□□□ -0.03
LETM1-203ENST00000505551 TBC1D2BQ9UPU7 963 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 STK24Q9Y6E0 443 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 FPGT-TNNI3KV9GXZ4 949 aa14.85□□□□□ -0.03
LETM1-203ENST00000505551 SH3TC1Q8TE82 1336 aa14.84□□□□□ -0.03
LETM1-203ENST00000505551 SRRM3A6NNA2 597 aaPredicted RBP14.84□□□□□ -0.03
LETM1-203ENST00000505551 H7C1W4 665 aa14.84□□□□□ -0.03
LETM1-203ENST00000505551 SLC8A1P32418 973 aa14.84□□□□□ -0.03
LETM1-203ENST00000505551 AP1ARQ63HQ0 302 aa14.84□□□□□ -0.03
LETM1-203ENST00000505551 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.84□□□□□ -0.03
LETM1-203ENST00000505551 SPATS2LQ9NUQ6 558 aaKnown RBP14.84□□□□□ -0.03
LETM1-203ENST00000505551 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.84□□□□□ -0.03
LETM1-203ENST00000505551 REXO2Q9Y3B8 237 aaKnown RBP14.84□□□□□ -0.03
LETM1-203ENST00000505551 ENC1O14682 589 aa14.84□□□□□ -0.03
LETM1-203ENST00000505551 CAPN15O75808 1086 aa14.84□□□□□ -0.03
LETM1-203ENST00000505551 PTGISQ16647 500 aa14.84□□□□□ -0.03
LETM1-203ENST00000505551 ZNF827Q17R98 1081 aa14.84□□□□□ -0.03
LETM1-203ENST00000505551 COPRSQ9NQ92 184 aa14.84□□□□□ -0.03
LETM1-203ENST00000505551 ABHD10Q9NUJ1 306 aa14.84□□□□□ -0.03
LETM1-203ENST00000505551 ANAPC4Q9UJX5 808 aa14.84□□□□□ -0.03
LETM1-203ENST00000505551 GOLGA6L7A0A1B0GV03 622 aa14.83□□□□□ -0.04
LETM1-203ENST00000505551 SRGAP2O75044 1071 aa14.83□□□□□ -0.04
LETM1-203ENST00000505551 CDKAL1Q5VV42 579 aa14.83□□□□□ -0.04
LETM1-203ENST00000505551 CDCA2Q69YH5 1023 aaPredicted RBP14.83□□□□□ -0.04
LETM1-203ENST00000505551 KCNV2Q8TDN2 545 aa14.83□□□□□ -0.04
LETM1-203ENST00000505551 SLF1Q9BQI6 1058 aa14.83□□□□□ -0.04
LETM1-203ENST00000505551 DSCC1Q9BVC3 393 aa14.83□□□□□ -0.04
LETM1-203ENST00000505551 MAF1Q9H063 256 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms