RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 CDC45O75419 566 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 CCNA1P78396 465 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 PRKCZQ05513 592 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 CCDC178Q5BJE1 867 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 RRP12Q5JTH9 1297 aaKnown RBP10.28□□□□□ -0.76
CTSB-205ENST00000505496 SLFN13Q68D06 897 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 LRRC47Q8N1G4 583 aaKnown RBP10.28□□□□□ -0.76
CTSB-205ENST00000505496 USP6NLQ92738 828 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 ATG4CQ96DT6 458 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 NUP88Q99567 741 aaPredicted RBP10.28□□□□□ -0.76
CTSB-205ENST00000505496 TMEM47Q9BQJ4 181 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 KRT23Q9C075 422 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 PORCNQ9H237 461 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 TOMM22Q9NS69 142 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 FBXO28Q9NVF7 368 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 ZSWIM5Q9P217 1185 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 GABRQQ9UN88 632 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 RBM8AQ9Y5S9 174 aaKnown RBP10.28□□□□□ -0.76
CTSB-205ENST00000505496 RLFQ13129 1914 aa10.28□□□□□ -0.76
CTSB-205ENST00000505496 B4E1Z4 1266 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 ATP2A1O14983 1001 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 SNHG28P0DPA3 235 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 TOP1P11387 765 aaKnown RBP10.27□□□□□ -0.77
CTSB-205ENST00000505496 BMP3P12645 472 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 FLT3LGP49771 235 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 TMEM132BQ14DG7 1078 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 NECTIN1Q15223 517 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 MORN1Q5T089 497 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 KIAA1211Q6ZU35 1233 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 IQCA1Q86XH1 822 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 PRPF38AQ8NAV1 312 aaKnown RBP10.27□□□□□ -0.77
CTSB-205ENST00000505496 SHCBP1Q8NEM2 672 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 PXYLP1Q8TE99 480 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 COA7Q96BR5 231 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 ZNF333Q96JL9 665 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 SLF1Q9BQI6 1058 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 PAGR1Q9BTK6 254 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 SPATC1LQ9H0A9 340 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 FEM1BQ9UK73 627 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 ZNF214Q9UL59 606 aaPredicted RBP10.27□□□□□ -0.77
CTSB-205ENST00000505496 TAF6LQ9Y6J9 622 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 LAMA4Q16363 1823 aa10.27□□□□□ -0.77
CTSB-205ENST00000505496 E7EWF7 191 aa10.26□□□□□ -0.77
CTSB-205ENST00000505496 XRCC5P13010 732 aaKnown RBP10.26□□□□□ -0.77
CTSB-205ENST00000505496 MCCP23508 829 aa10.26□□□□□ -0.77
CTSB-205ENST00000505496 SLC1A4P43007 532 aa10.26□□□□□ -0.77
CTSB-205ENST00000505496 CASC1Q6TDU7 716 aa10.26□□□□□ -0.77
CTSB-205ENST00000505496 BTNL9Q6UXG8 535 aa10.26□□□□□ -0.77
CTSB-205ENST00000505496 STOX1Q6ZVD7 989 aa10.26□□□□□ -0.77
CTSB-205ENST00000505496 GPR142Q7Z601 462 aa10.26□□□□□ -0.77
CTSB-205ENST00000505496 PLEKHH3Q7Z736 793 aa10.26□□□□□ -0.77
CTSB-205ENST00000505496 ENAHQ8N8S7 591 aaPredicted RBP10.26□□□□□ -0.77
CTSB-205ENST00000505496 DCAF4Q8WV16 495 aa10.26□□□□□ -0.77
CTSB-205ENST00000505496 ZSCAN10Q96SZ4 725 aaPredicted RBP10.26□□□□□ -0.77
CTSB-205ENST00000505496 MOV10L1Q9BXT6 1211 aaKnown RBP10.26□□□□□ -0.77
CTSB-205ENST00000505496 SLC38A10Q9HBR0 1119 aa10.26□□□□□ -0.77
CTSB-205ENST00000505496 ANO2Q9NQ90 1003 aa10.26□□□□□ -0.77
CTSB-205ENST00000505496 A0A0G2JMZ2 1700 aa10.26□□□□□ -0.77
CTSB-205ENST00000505496 ZSWIM8A7E2V4 1837 aa10.26□□□□□ -0.77
CTSB-205ENST00000505496 SLC15A5A6NIM6 579 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 TMEM232C9JQI7 657 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 RAD21O60216 631 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 SLC25A27O95847 323 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 IGHA2P01877 340 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 HOXC6P09630 235 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 FDX1P10109 184 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 PDHBP11177 359 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 GRK4P32298 578 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 STAT2P52630 851 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 OAZ1P54368 228 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 GRB14Q14449 540 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 SEC23AQ15436 765 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 TSGA10IPQ3SY00 556 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 SLC9C1Q4G0N8 1177 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 CYB5R4Q7L1T6 521 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.25□□□□□ -0.77
CTSB-205ENST00000505496 NBPF11Q86T75 865 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 FAM160B2Q86V87 743 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 RIOX2Q8IUF8 465 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 MB21D2Q8IYB1 491 aaPredicted RBP10.25□□□□□ -0.77
CTSB-205ENST00000505496 ABRAQ8N0Z2 381 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 SLAIN1Q8ND83 568 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 RAET1EQ8TD07 263 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 CHURC1Q8WUH1 139 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 SOCS4Q8WXH5 440 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 MTA3Q9BTC8 594 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 MROH8Q9H579 483 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 TNKSO95271 1327 aa10.25□□□□□ -0.77
CTSB-205ENST00000505496 SLC27A2O14975 620 aa10.24□□□□□ -0.77
CTSB-205ENST00000505496 STRNO43815 780 aa10.24□□□□□ -0.77
CTSB-205ENST00000505496 ADCY3O60266 1144 aa10.24□□□□□ -0.77
CTSB-205ENST00000505496 ECM2O94769 699 aaPredicted RBP10.24□□□□□ -0.77
CTSB-205ENST00000505496 ERCC3P19447 782 aa10.24□□□□□ -0.77
CTSB-205ENST00000505496 PTPREP23469 700 aa10.24□□□□□ -0.77
CTSB-205ENST00000505496 COPB2P35606 906 aa10.24□□□□□ -0.77
CTSB-205ENST00000505496 STAT3P40763 770 aa10.24□□□□□ -0.77
CTSB-205ENST00000505496 RGS19P49795 217 aa10.24□□□□□ -0.77
CTSB-205ENST00000505496 TRDNQ13061 729 aa10.24□□□□□ -0.77
CTSB-205ENST00000505496 CREB3L3Q68CJ9 461 aa10.24□□□□□ -0.77
CTSB-205ENST00000505496 RASGRP2Q7LDG7 609 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 265.6 ms