RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 hCG_1642624A0A1W2PR95 340 aa12.07□□□□□ -0.48
TPM3-217ENST00000504663 VPS37CA5D8V6 355 aaPredicted RBP12.07□□□□□ -0.48
TPM3-217ENST00000504663 ADAMTS3O15072 1205 aa12.07□□□□□ -0.48
TPM3-217ENST00000504663 DEXIO95424 95 aa12.07□□□□□ -0.48
TPM3-217ENST00000504663 GUCY1B3Q02153 619 aa12.07□□□□□ -0.48
TPM3-217ENST00000504663 SSRP1Q08945 709 aaKnown RBP12.07□□□□□ -0.48
TPM3-217ENST00000504663 TYW1BQ6NUM6 668 aa12.07□□□□□ -0.48
TPM3-217ENST00000504663 ZC3H15Q8WU90 426 aaKnown RBP12.07□□□□□ -0.48
TPM3-217ENST00000504663 MTMR8Q96EF0 704 aa12.07□□□□□ -0.48
TPM3-217ENST00000504663 TRIM34Q9BYJ4 488 aa12.07□□□□□ -0.48
TPM3-217ENST00000504663 RIOX1Q9H6W3 641 aa12.07□□□□□ -0.48
TPM3-217ENST00000504663 FRMPD2Q68DX3 1309 aaPredicted RBP12.07□□□□□ -0.48
TPM3-217ENST00000504663 NDUFB10O96000 172 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 PARP1P09874 1014 aaKnown RBP12.06□□□□□ -0.48
TPM3-217ENST00000504663 SMARCA1P28370 1054 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 KIF5BP33176 963 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 MCM4P33991 863 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 KIF23Q02241 960 aaPredicted RBP12.06□□□□□ -0.48
TPM3-217ENST00000504663 PFKFB3Q16875 520 aaPredicted RBP12.06□□□□□ -0.48
TPM3-217ENST00000504663 ASPRV1Q53RT3 343 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 PPP4R3BQ5MIZ7 849 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 KRT40Q6A162 431 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 TTBK2Q6IQ55 1244 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 DPY19L2Q6NUT2 758 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 FAM173BQ6P4H8 233 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 CPLX2Q6PUV4 134 aaKnown RBP12.06□□□□□ -0.48
TPM3-217ENST00000504663 FERMT3Q86UX7 667 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 CCDC82Q8N4S0 544 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 FAM184AQ8NB25 1140 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.06□□□□□ -0.48
TPM3-217ENST00000504663 KLRG1Q96E93 195 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 GMCL1Q96IK5 515 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 C8orf76Q96K31 380 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 ZNF341Q9BYN7 854 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 GINM1Q9NU53 330 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 TMX2Q9Y320 296 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 A0A0G2JMZ2 1700 aa12.06□□□□□ -0.48
TPM3-217ENST00000504663 KLRF2D3W0D1 207 aa12.05□□□□□ -0.48
TPM3-217ENST00000504663 CTNND1O60716 968 aaKnown RBP12.05□□□□□ -0.48
TPM3-217ENST00000504663 PPP1R11O60927 126 aaPredicted RBP12.05□□□□□ -0.48
TPM3-217ENST00000504663 USP2O75604 605 aaPredicted RBP12.05□□□□□ -0.48
TPM3-217ENST00000504663 ASNSP08243 561 aa12.05□□□□□ -0.48
TPM3-217ENST00000504663 NOL9Q5SY16 702 aaKnown RBP12.05□□□□□ -0.48
TPM3-217ENST00000504663 DCAF4Q8WV16 495 aa12.05□□□□□ -0.48
TPM3-217ENST00000504663 TNFRSF25Q93038 417 aa12.05□□□□□ -0.48
TPM3-217ENST00000504663 CABP5Q9NP86 173 aa12.05□□□□□ -0.48
TPM3-217ENST00000504663 MTMR7Q9Y216 660 aa12.05□□□□□ -0.48
TPM3-217ENST00000504663 V9GY48 417 aaPredicted RBP12.05□□□□□ -0.48
TPM3-217ENST00000504663 F5H6K3 240 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 MMP1P03956 469 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 SCG2P13521 617 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 PDIA4P13667 645 aaKnown RBP12.04□□□□□ -0.48
TPM3-217ENST00000504663 GNAQP50148 359 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 KLRC3Q07444 240 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 DGKZQ13574 1117 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 DCAF15Q66K64 600 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 SLFN13Q68D06 897 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 WWC2Q6AWC2 1192 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 BTNL9Q6UXG8 535 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.04□□□□□ -0.48
TPM3-217ENST00000504663 KCTD1Q719H9 257 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 SCYL3Q8IZE3 742 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 TMEM87AQ8NBN3 555 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 CDCA5Q96FF9 252 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 NUP88Q99567 741 aaPredicted RBP12.04□□□□□ -0.48
TPM3-217ENST00000504663 LZTS2Q9BRK4 669 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 PHF20Q9BVI0 1012 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 UBA5Q9GZZ9 404 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 VCPKMTQ9H867 229 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 JMJD4Q9H9V9 463 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 VPS54Q9P1Q0 977 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 KCNJ14Q9UNX9 436 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 KIF3AQ9Y496 699 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 SNCAIPQ9Y6H5 919 aa12.04□□□□□ -0.48
TPM3-217ENST00000504663 SMCHD1A6NHR9 2005 aa12.03□□□□□ -0.48
TPM3-217ENST00000504663 IQCA1LA6NCM1 817 aa12.03□□□□□ -0.48
TPM3-217ENST00000504663 M0R2N6 131 aa12.03□□□□□ -0.48
TPM3-217ENST00000504663 STXBP3O00186 592 aa12.03□□□□□ -0.48
TPM3-217ENST00000504663 GTPBP6O43824 516 aaPredicted RBP12.03□□□□□ -0.48
TPM3-217ENST00000504663 U2AF2P26368 475 aaKnown RBP eCLIP12.03□□□□□ -0.48
TPM3-217ENST00000504663 ATP2B2Q01814 1243 aa12.03□□□□□ -0.48
TPM3-217ENST00000504663 DNM1Q05193 864 aaKnown RBP12.03□□□□□ -0.48
TPM3-217ENST00000504663 GPATCH4Q5T3I0 446 aaKnown RBP12.03□□□□□ -0.48
TPM3-217ENST00000504663 KRT26Q7Z3Y9 468 aa12.03□□□□□ -0.48
TPM3-217ENST00000504663 USP48Q86UV5 1035 aa12.03□□□□□ -0.48
TPM3-217ENST00000504663 TRIM22Q8IYM9 498 aa12.03□□□□□ -0.48
TPM3-217ENST00000504663 OXER1Q8TDS5 423 aa12.03□□□□□ -0.48
TPM3-217ENST00000504663 ZKSCAN4Q969J2 545 aaPredicted RBP12.03□□□□□ -0.48
TPM3-217ENST00000504663 DCPSQ96C86 337 aaKnown RBP12.03□□□□□ -0.48
TPM3-217ENST00000504663 PIGSQ96S52 555 aa12.03□□□□□ -0.48
TPM3-217ENST00000504663 WRNIP1Q96S55 665 aa12.03□□□□□ -0.48
TPM3-217ENST00000504663 WDR18Q9BV38 432 aa12.03□□□□□ -0.48
TPM3-217ENST00000504663 GPCPD1Q9NPB8 672 aa12.03□□□□□ -0.48
TPM3-217ENST00000504663 CNPY2Q9Y2B0 182 aa12.03□□□□□ -0.48
TPM3-217ENST00000504663 H3BQV1 296 aa12.02□□□□□ -0.49
TPM3-217ENST00000504663 MAP3K11Q16584 847 aa12.02□□□□□ -0.49
TPM3-217ENST00000504663 NOM1Q5C9Z4 860 aaKnown RBP12.02□□□□□ -0.49
TPM3-217ENST00000504663 EARS2Q5JPH6 523 aaKnown RBP12.02□□□□□ -0.49
TPM3-217ENST00000504663 IFFO2Q5TF58 517 aa12.02□□□□□ -0.49
TPM3-217ENST00000504663 SULF1Q8IWU6 871 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms