RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 CCDC158Q5M9N0 1113 aa11.08□□□□□ -0.64
DHFR-202ENST00000504396 ATF7IPQ6VMQ6 1270 aa11.08□□□□□ -0.64
DHFR-202ENST00000504396 FAM161BQ96MY7 647 aa11.08□□□□□ -0.64
DHFR-202ENST00000504396 DNAJC18Q9H819 358 aa11.08□□□□□ -0.64
DHFR-202ENST00000504396 MTMR10Q9NXD2 777 aa11.08□□□□□ -0.64
DHFR-202ENST00000504396 PRKAG2Q9UGJ0 569 aa11.08□□□□□ -0.64
DHFR-202ENST00000504396 DDX11L8A8MPP1 907 aa11.07□□□□□ -0.64
DHFR-202ENST00000504396 GLRX3O76003 335 aaKnown RBP11.07□□□□□ -0.64
DHFR-202ENST00000504396 CCNA1P78396 465 aa11.07□□□□□ -0.64
DHFR-202ENST00000504396 JAG1P78504 1218 aa11.07□□□□□ -0.64
DHFR-202ENST00000504396 RAB3GAP1Q15042 981 aa11.07□□□□□ -0.64
DHFR-202ENST00000504396 Q3C1V9 767 aa11.07□□□□□ -0.64
DHFR-202ENST00000504396 MFSD14CQ5VZR4 134 aa11.07□□□□□ -0.64
DHFR-202ENST00000504396 USP17L2Q6R6M4 530 aa11.07□□□□□ -0.64
DHFR-202ENST00000504396 FOXP4Q8IVH2 680 aaPredicted RBP11.07□□□□□ -0.64
DHFR-202ENST00000504396 FRAT1Q92837 279 aaPredicted RBP11.07□□□□□ -0.64
DHFR-202ENST00000504396 SENP6Q9GZR1 1112 aaPredicted RBP11.07□□□□□ -0.64
DHFR-202ENST00000504396 RBPJLQ9UBG7 517 aa11.07□□□□□ -0.64
DHFR-202ENST00000504396 IVNS1ABPQ9Y6Y0 642 aa11.07□□□□□ -0.64
DHFR-202ENST00000504396 PNMA6EA0A0J9YXQ4 647 aa11.06□□□□□ -0.64
DHFR-202ENST00000504396 IPO8O15397 1037 aaKnown RBP11.06□□□□□ -0.64
DHFR-202ENST00000504396 ACTN4O43707 911 aaKnown RBP11.06□□□□□ -0.64
DHFR-202ENST00000504396 GH2P01242 217 aa11.06□□□□□ -0.64
DHFR-202ENST00000504396 USP5P45974 858 aa11.06□□□□□ -0.64
DHFR-202ENST00000504396 BLOC1S3Q6QNY0 202 aa11.06□□□□□ -0.64
DHFR-202ENST00000504396 ADGRA1Q86SQ6 560 aa11.06□□□□□ -0.64
DHFR-202ENST00000504396 METTL16Q86W50 562 aaKnown RBP11.06□□□□□ -0.64
DHFR-202ENST00000504396 RDH13Q8NBN7 331 aa11.06□□□□□ -0.64
DHFR-202ENST00000504396 IDH1O75874 414 aaKnown RBP11.05□□□□□ -0.64
DHFR-202ENST00000504396 COL6A1P12109 1028 aa11.05□□□□□ -0.64
DHFR-202ENST00000504396 CYP7A1P22680 504 aa11.05□□□□□ -0.64
DHFR-202ENST00000504396 RARSP54136 660 aaKnown RBP11.05□□□□□ -0.64
DHFR-202ENST00000504396 DYNLL1P63167 89 aaKnown RBP11.05□□□□□ -0.64
DHFR-202ENST00000504396 ATP2B2Q01814 1243 aa11.05□□□□□ -0.64
DHFR-202ENST00000504396 MORN1Q5T089 497 aa11.05□□□□□ -0.64
DHFR-202ENST00000504396 CERS3Q8IU89 383 aa11.05□□□□□ -0.64
DHFR-202ENST00000504396 MIGA1Q8NAN2 632 aa11.05□□□□□ -0.64
DHFR-202ENST00000504396 CLUAP1Q96AJ1 413 aa11.05□□□□□ -0.64
DHFR-202ENST00000504396 EDC3Q96F86 508 aaKnown RBP11.05□□□□□ -0.64
DHFR-202ENST00000504396 DBNDD2Q9BQY9 259 aa11.05□□□□□ -0.64
DHFR-202ENST00000504396 GPR108Q9NPR9 543 aa11.05□□□□□ -0.64
DHFR-202ENST00000504396 MYO5AQ9Y4I1 1855 aaKnown RBP11.05□□□□□ -0.64
DHFR-202ENST00000504396 MYH1P12882 1939 aa11.05□□□□□ -0.64
DHFR-202ENST00000504396 USP17L15C9J2P7 530 aa11.04□□□□□ -0.64
DHFR-202ENST00000504396 USP17L13C9JLJ4 530 aa11.04□□□□□ -0.64
DHFR-202ENST00000504396 USP17L11C9JVI0 530 aa11.04□□□□□ -0.64
DHFR-202ENST00000504396 USP17L18D6R9N7 530 aa11.04□□□□□ -0.64
DHFR-202ENST00000504396 USP17L22D6RA61 530 aa11.04□□□□□ -0.64
DHFR-202ENST00000504396 USP17L17D6RBQ6 530 aa11.04□□□□□ -0.64
DHFR-202ENST00000504396 USP17L19D6RCP7 530 aa11.04□□□□□ -0.64
DHFR-202ENST00000504396 USP17L20D6RJB6 530 aa11.04□□□□□ -0.64
DHFR-202ENST00000504396 USP17L24Q0WX57 530 aa11.04□□□□□ -0.64
DHFR-202ENST00000504396 TNNI3KQ59H18 835 aa11.04□□□□□ -0.64
DHFR-202ENST00000504396 ZNF697Q5TEC3 545 aa11.04□□□□□ -0.64
DHFR-202ENST00000504396 TMED8Q6PL24 325 aaPredicted RBP11.04□□□□□ -0.64
DHFR-202ENST00000504396 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.04□□□□□ -0.64
DHFR-202ENST00000504396 USP6NLQ92738 828 aa11.04□□□□□ -0.64
DHFR-202ENST00000504396 PRDM5Q9NQX1 630 aaPredicted RBP11.04□□□□□ -0.64
DHFR-202ENST00000504396 DDX20Q9UHI6 824 aaKnown RBP11.04□□□□□ -0.64
DHFR-202ENST00000504396 RABGAP1Q9Y3P9 1069 aa11.04□□□□□ -0.64
DHFR-202ENST00000504396 FPGT-TNNI3KV9GXZ4 949 aa11.04□□□□□ -0.64
DHFR-202ENST00000504396 MSCO60682 206 aa11.03□□□□□ -0.64
DHFR-202ENST00000504396 CYP2E1P05181 493 aaPredicted RBP11.03□□□□□ -0.64
DHFR-202ENST00000504396 TRIM27P14373 513 aa11.03□□□□□ -0.64
DHFR-202ENST00000504396 ZAP70P43403 619 aa11.03□□□□□ -0.64
DHFR-202ENST00000504396 USP14P54578 494 aa11.03□□□□□ -0.64
DHFR-202ENST00000504396 ZNF512BQ96KM6 892 aaPredicted RBP11.03□□□□□ -0.64
DHFR-202ENST00000504396 PIH1D3Q9NQM4 214 aaKnown RBP11.03□□□□□ -0.64
DHFR-202ENST00000504396 FLRT1Q9NZU1 646 aa11.03□□□□□ -0.64
DHFR-202ENST00000504396 SERPINB13Q9UIV8 391 aa11.03□□□□□ -0.64
DHFR-202ENST00000504396 ATP11BQ9Y2G3 1177 aa11.03□□□□□ -0.64
DHFR-202ENST00000504396 SLC15A5A6NIM6 579 aa11.02□□□□□ -0.64
DHFR-202ENST00000504396 SURF6O75683 361 aaKnown RBP11.02□□□□□ -0.64
DHFR-202ENST00000504396 VCAM1P19320 739 aa11.02□□□□□ -0.64
DHFR-202ENST00000504396 CYP2C19P33261 490 aa11.02□□□□□ -0.64
DHFR-202ENST00000504396 RTP1P59025 263 aa11.02□□□□□ -0.64
DHFR-202ENST00000504396 ABCB5Q2M3G0 1257 aa11.02□□□□□ -0.64
DHFR-202ENST00000504396 CERKLQ49MI3 558 aaPredicted RBP11.02□□□□□ -0.64
DHFR-202ENST00000504396 DPP9Q86TI2 863 aa11.02□□□□□ -0.64
DHFR-202ENST00000504396 MAGEB6Q8N7X4 407 aa11.02□□□□□ -0.64
DHFR-202ENST00000504396 KRI1Q8N9T8 703 aaKnown RBP11.02□□□□□ -0.64
DHFR-202ENST00000504396 COL25A1Q9BXS0 654 aaPredicted RBP11.02□□□□□ -0.64
DHFR-202ENST00000504396 RPAP3Q9H6T3 665 aaPredicted RBP11.02□□□□□ -0.64
DHFR-202ENST00000504396 CABP5Q9NP86 173 aa11.02□□□□□ -0.64
DHFR-202ENST00000504396 TNNQ9UQP3 1299 aa11.02□□□□□ -0.64
DHFR-202ENST00000504396 KBTBD13C9JR72 458 aa11.01□□□□□ -0.65
DHFR-202ENST00000504396 DNM1LO00429 736 aa11.01□□□□□ -0.65
DHFR-202ENST00000504396 MPHOSPH10O00566 681 aaKnown RBP11.01□□□□□ -0.65
DHFR-202ENST00000504396 ZMYND10O75800 440 aa11.01□□□□□ -0.65
DHFR-202ENST00000504396 CNMDO75829 334 aa11.01□□□□□ -0.65
DHFR-202ENST00000504396 GJC2Q5T442 439 aaPredicted RBP11.01□□□□□ -0.65
DHFR-202ENST00000504396 ANO1Q5XXA6 986 aa11.01□□□□□ -0.65
DHFR-202ENST00000504396 CATSPERGQ6ZRH7 1159 aa11.01□□□□□ -0.65
DHFR-202ENST00000504396 LPAR1Q92633 364 aa11.01□□□□□ -0.65
DHFR-202ENST00000504396 C12orf42Q96LP6 360 aa11.01□□□□□ -0.65
DHFR-202ENST00000504396 GUCD1Q96NT3 240 aa11.01□□□□□ -0.65
DHFR-202ENST00000504396 TANGO6Q9C0B7 1094 aa11.01□□□□□ -0.65
DHFR-202ENST00000504396 C1orf115Q9H7X2 142 aa11.01□□□□□ -0.65
DHFR-202ENST00000504396 NAV1Q8NEY1 1877 aa11.01□□□□□ -0.65
DHFR-202ENST00000504396 LTBP2Q14767 1821 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms