RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 CEP95Q96GE4 821 aa16.71■□□□□ 0.27
PDLIM7-211ENST00000504318 FAM227BQ96M60 508 aa16.71■□□□□ 0.27
PDLIM7-211ENST00000504318 HMX1Q9NP08 348 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-211ENST00000504318 MTMR4Q9NYA4 1195 aa16.71■□□□□ 0.27
PDLIM7-211ENST00000504318 ZNF214Q9UL59 606 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-211ENST00000504318 PPP1R9AQ9ULJ8 1098 aa16.71■□□□□ 0.27
PDLIM7-211ENST00000504318 PLXNA1Q9UIW2 1896 aa16.7■□□□□ 0.26
PDLIM7-211ENST00000504318 COBLO75128 1261 aa16.7■□□□□ 0.26
PDLIM7-211ENST00000504318 NDUFB10O96000 172 aa16.7■□□□□ 0.26
PDLIM7-211ENST00000504318 FGRP09769 529 aa16.7■□□□□ 0.26
PDLIM7-211ENST00000504318 ZKSCAN1P17029 563 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-211ENST00000504318 NOVP48745 357 aa16.7■□□□□ 0.26
PDLIM7-211ENST00000504318 FAM83BQ5T0W9 1011 aa16.7■□□□□ 0.26
PDLIM7-211ENST00000504318 ZNF589Q86UQ0 364 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-211ENST00000504318 CHD1LQ86WJ1 897 aa16.7■□□□□ 0.26
PDLIM7-211ENST00000504318 TRPV1Q8NER1 839 aa16.7■□□□□ 0.26
PDLIM7-211ENST00000504318 NEDD1Q8NHV4 660 aa16.7■□□□□ 0.26
PDLIM7-211ENST00000504318 MKNK2Q9HBH9 465 aa16.7■□□□□ 0.26
PDLIM7-211ENST00000504318 ANAPC4Q9UJX5 808 aa16.7■□□□□ 0.26
PDLIM7-211ENST00000504318 H0YGN5 161 aa16.69■□□□□ 0.26
PDLIM7-211ENST00000504318 VWA5AO00534 786 aa16.69■□□□□ 0.26
PDLIM7-211ENST00000504318 ADORA2AP29274 412 aa16.69■□□□□ 0.26
PDLIM7-211ENST00000504318 ALX1Q15699 326 aa16.69■□□□□ 0.26
PDLIM7-211ENST00000504318 ANKLE1Q8NAG6 615 aa16.69■□□□□ 0.26
PDLIM7-211ENST00000504318 NUP88Q99567 741 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-211ENST00000504318 PRO3102Q9H379 93 aa16.69■□□□□ 0.26
PDLIM7-211ENST00000504318 RWDD1Q9H446 243 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-211ENST00000504318 GOPCQ9HD26 462 aa16.69■□□□□ 0.26
PDLIM7-211ENST00000504318 INCENPQ9NQS7 918 aa16.69■□□□□ 0.26
PDLIM7-211ENST00000504318 HELLSQ9NRZ9 838 aa16.69■□□□□ 0.26
PDLIM7-211ENST00000504318 SYNPO2Q9UMS6 1093 aa16.69■□□□□ 0.26
PDLIM7-211ENST00000504318 F5H6K3 240 aa16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 TFRCP02786 760 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 APPP05067 770 aa16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 ATP2B2Q01814 1243 aa16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 KLRC3Q07444 240 aa16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 RIOX2Q8IUF8 465 aa16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 ABRAQ8N0Z2 381 aa16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 PAWRQ96IZ0 340 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 NACAP1Q9BZK3 213 aa16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 NAPBQ9H115 298 aa16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 IL17RBQ9NRM6 502 aa16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 SUPT16HQ9Y5B9 1047 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 PFASO15067 1338 aa16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 ZMYM6O95789 1325 aa16.68■□□□□ 0.26
PDLIM7-211ENST00000504318 STRNO43815 780 aa16.67■□□□□ 0.26
PDLIM7-211ENST00000504318 COL6A1P12109 1028 aa16.67■□□□□ 0.26
PDLIM7-211ENST00000504318 CYBAP13498 195 aa16.67■□□□□ 0.26
PDLIM7-211ENST00000504318 FAM47AQ5JRC9 791 aa16.67■□□□□ 0.26
PDLIM7-211ENST00000504318 HABP4Q5JVS0 413 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-211ENST00000504318 OLFML2BQ68BL8 750 aa16.67■□□□□ 0.26
PDLIM7-211ENST00000504318 B4GALNT3Q6L9W6 998 aa16.67■□□□□ 0.26
PDLIM7-211ENST00000504318 GMCL1P1Q8NEA9 526 aa16.67■□□□□ 0.26
PDLIM7-211ENST00000504318 NBPF3Q9H094 633 aa16.67■□□□□ 0.26
PDLIM7-211ENST00000504318 CLIP2Q9UDT6 1046 aa16.67■□□□□ 0.26
PDLIM7-211ENST00000504318 TRIOBPQ9H2D6 2365 aa16.67■□□□□ 0.26
PDLIM7-211ENST00000504318 HSPD1P10809 573 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-211ENST00000504318 CTDSPL2Q05D32 466 aa16.66■□□□□ 0.26
PDLIM7-211ENST00000504318 NMIQ13287 307 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-211ENST00000504318 MCMDC2Q4G0Z9 681 aa16.66■□□□□ 0.26
PDLIM7-211ENST00000504318 WDR78Q5VTH9 848 aa16.66■□□□□ 0.26
PDLIM7-211ENST00000504318 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.66■□□□□ 0.26
PDLIM7-211ENST00000504318 CCAR1Q8IX12 1150 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-211ENST00000504318 ZNF444Q8N0Y2 327 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-211ENST00000504318 MROH8Q9H579 483 aa16.66■□□□□ 0.26
PDLIM7-211ENST00000504318 SMCHD1A6NHR9 2005 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 ATP2A1O14983 1001 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 ORC4O43929 436 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 TTLL1O95922 423 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 FGAP02671 866 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 PDE4AP27815 886 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 CYP2C19P33261 490 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 TFAP4Q01664 338 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 PDE4BQ07343 736 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 SLF1Q9BQI6 1058 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 HTATIP2Q9BUP3 242 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 ZNF287Q9HBT7 754 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 COLQQ9Y215 455 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 RIPK3Q9Y572 518 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 IVNS1ABPQ9Y6Y0 642 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 SZT2Q5T011 3432 aa16.65■□□□□ 0.26
PDLIM7-211ENST00000504318 NMT2O60551 498 aa16.64■□□□□ 0.25
PDLIM7-211ENST00000504318 SLC25A27O95847 323 aa16.64■□□□□ 0.25
PDLIM7-211ENST00000504318 RASGRP2Q7LDG7 609 aa16.64■□□□□ 0.25
PDLIM7-211ENST00000504318 NCAPG2Q86XI2 1143 aa16.64■□□□□ 0.25
PDLIM7-211ENST00000504318 LRRC47Q8N1G4 583 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-211ENST00000504318 MAML3Q96JK9 1138 aa16.64■□□□□ 0.25
PDLIM7-211ENST00000504318 DNAH12Q6ZR08 3092 aa16.64■□□□□ 0.25
PDLIM7-211ENST00000504318 LAMA3Q16787 3333 aa16.63■□□□□ 0.25
PDLIM7-211ENST00000504318 TSPY3P0CV98 308 aa16.63■□□□□ 0.25
PDLIM7-211ENST00000504318 TSPY8P0CW00 308 aa16.63■□□□□ 0.25
PDLIM7-211ENST00000504318 SDSP20132 328 aa16.63■□□□□ 0.25
PDLIM7-211ENST00000504318 STAT3P40763 770 aa16.63■□□□□ 0.25
PDLIM7-211ENST00000504318 PLS1Q14651 629 aa16.63■□□□□ 0.25
PDLIM7-211ENST00000504318 ZNF792Q3KQV3 632 aa16.63■□□□□ 0.25
PDLIM7-211ENST00000504318 MFSD14CQ5VZR4 134 aa16.63■□□□□ 0.25
PDLIM7-211ENST00000504318 NECAB2Q7Z6G3 386 aa16.63■□□□□ 0.25
PDLIM7-211ENST00000504318 DPF3Q92784 378 aa16.63■□□□□ 0.25
PDLIM7-211ENST00000504318 SLC38A10Q9HBR0 1119 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms