RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 SIRT5Q9NXA8 310 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 SERPINA10Q9UK55 444 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 USP21Q9UK80 565 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 PCDHGB3Q9Y5G1 929 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 MAP2P11137 1827 aaKnown RBP4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 PRPF6O94906 941 aaKnown RBP4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 CPA1P15085 419 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 PRLRP16471 622 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 TCF7P36402 384 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 CRY1Q16526 586 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 UNC5CLQ8IV45 518 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 PAF1Q8N7H5 531 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 RGL1Q9NZL6 768 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 TRPC5Q9UL62 973 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 TOGARAM1Q9Y4F4 1720 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 STX6O43752 255 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 N4BP1O75113 896 aaKnown RBP4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 SPATA31D3P0C874 917 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 SYT1P21579 422 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 OXCT1P55809 520 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 SFSWAPQ12872 951 aaKnown RBP4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 SF3A3Q12874 501 aaKnown RBP eCLIP4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 NEDD9Q14511 834 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 INF2Q27J81 1249 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 KRT24Q2M2I5 525 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 CCDC57Q2TAC2 916 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 ACCSLQ4AC99 568 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 SPECC1Q5M775 1068 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 CREB3L3Q68CJ9 461 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 NEPROQ6NW34 567 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 PLBD1Q6P4A8 553 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 LARP1Q6PKG0 1096 aaKnown RBP4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 SPATA31D4Q6ZUB0 917 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 FAM20AQ96MK3 541 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 KCNMB3Q9NPA1 279 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 CPSF2Q9P2I0 782 aaKnown RBP4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 DNAI1Q9UI46 699 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 KIF24Q5T7B8 1368 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 SPATA31A5Q5VU36 1347 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 SPATA31A7Q8IWB4 1347 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 A0A0B4J203 849 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 ATP5J2-PTCD1G3V325 749 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 NDUFB5O43674 189 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 AHCYL1O43865 530 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 MGRN1O60291 552 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 SEC31AO94979 1220 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 PTGS1P23219 599 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 COPB2P35606 906 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 PIP4K2AP48426 406 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 DNM1Q05193 864 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 EIF4A2Q14240 407 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 ANKRD1Q15327 319 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 FIP1L1Q6UN15 594 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 CHST3Q7LGC8 479 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 GPIHBP1Q8IV16 184 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 ERMNQ8TAM6 284 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 TCP11Q8WWU5 503 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 NELL1Q92832 810 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 MRFAP1L1Q96HT8 127 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 C8orf76Q96K31 380 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 ZNF570Q96NI8 536 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 MEIS3Q99687 375 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 DNAJC25Q9H1X3 360 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 PLEKHA4Q9H4M7 779 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 JADE2Q9NQC1 790 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 COMMD8Q9NX08 183 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 SLC5A4Q9NY91 659 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 KIAA1257Q9ULG3 409 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 LIMCH1Q9UPQ0 1083 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 MYO1FO00160 1098 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 SDSP20132 328 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 LMOD1P29536 600 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 WEE1P30291 646 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 CCT8P50990 548 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 HLTFQ14527 1009 aaKnown RBP eCLIP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 SEPT7Q16181 437 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 NFE2L2Q16236 605 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 PPP1R15BQ5SWA1 713 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 FAAH2Q6GMR7 532 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 OTUD6AQ7L8S5 288 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 USP48Q86UV5 1035 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 MAGEC3Q8TD91 643 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 EYA1Q99502 592 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 MPHOSPH8Q99549 860 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 UBAC1Q9BSL1 405 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 EBF2Q9HAK2 575 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 DACT1Q9NYF0 836 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 LRP2BPQ9P2M1 347 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 RIMKLBQ9ULI2 386 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 DOT1LQ8TEK3 1739 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 DICER1Q9UPY3 1922 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 CRB1P82279 1406 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 SH3TC1Q8TE82 1336 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 ATXN2Q99700 1313 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 PCM1Q15154 2024 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 A0A087WUV0 522 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 FAM170AA1A519 330 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 BTBD11A6QL63 1104 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 CCP110O43303 1012 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 TACC1O75410 805 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms