RNA–Protein interactions for RNA: ENST00000504147.5

CDK7-203, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-203ENST00000504147 XRCC6P12956 609 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDK7-203ENST00000504147 CALML3P27482 149 aa11.78□□□□□ -0.52
CDK7-203ENST00000504147 PRELPP51888 382 aa11.78□□□□□ -0.52
CDK7-203ENST00000504147 ASPRV1Q53RT3 343 aa11.78□□□□□ -0.52
CDK7-203ENST00000504147 RBM26Q5T8P6 1007 aaKnown RBP11.78□□□□□ -0.52
CDK7-203ENST00000504147 CCDC73Q6ZRK6 1079 aa11.78□□□□□ -0.52
CDK7-203ENST00000504147 TMEM179Q6ZVK1 233 aa11.78□□□□□ -0.52
CDK7-203ENST00000504147 RASGRP2Q7LDG7 609 aa11.78□□□□□ -0.52
CDK7-203ENST00000504147 JMYQ8N9B5 988 aa11.78□□□□□ -0.52
CDK7-203ENST00000504147 FSIP1Q8NA03 581 aa11.78□□□□□ -0.52
CDK7-203ENST00000504147 RRP36Q96EU6 259 aaKnown RBP11.78□□□□□ -0.52
CDK7-203ENST00000504147 UBA5Q9GZZ9 404 aa11.78□□□□□ -0.52
CDK7-203ENST00000504147 NUP62CLQ9H1M0 184 aa11.78□□□□□ -0.52
CDK7-203ENST00000504147 TSPY26PQ9H489 355 aa11.78□□□□□ -0.52
CDK7-203ENST00000504147 CLSTN2Q9H4D0 955 aa11.78□□□□□ -0.52
CDK7-203ENST00000504147 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDK7-203ENST00000504147 HERC5Q9UII4 1024 aaKnown RBP11.78□□□□□ -0.52
CDK7-203ENST00000504147 CNTNAP1P78357 1384 aa11.78□□□□□ -0.52
CDK7-203ENST00000504147 ZNF646O15015 1829 aaPredicted RBP11.77□□□□□ -0.52
CDK7-203ENST00000504147 SHTN1A0MZ66 631 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 PPP6R2O75170 966 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 NR1I2O75469 434 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 GDF11O95390 407 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 EEF2P13639 858 aaKnown RBP11.77□□□□□ -0.53
CDK7-203ENST00000504147 MARCKSP29966 332 aaPredicted RBP11.77□□□□□ -0.53
CDK7-203ENST00000504147 GMPSP49915 693 aaPredicted RBP11.77□□□□□ -0.53
CDK7-203ENST00000504147 ZNF543Q08ER8 600 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 SEPT2Q15019 361 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 NPY5RQ15761 445 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 SHROOM1Q2M3G4 852 aaPredicted RBP11.77□□□□□ -0.53
CDK7-203ENST00000504147 NBPF9Q3BBW0 867 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 AXDND1Q5T1B0 1012 aaPredicted RBP11.77□□□□□ -0.53
CDK7-203ENST00000504147 WWC2Q6AWC2 1192 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 HEATR3Q7Z4Q2 680 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 FAM83AQ86UY5 434 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 SIAH1Q8IUQ4 282 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 FAM177A1Q8N128 213 aaPredicted RBP11.77□□□□□ -0.53
CDK7-203ENST00000504147 MRPS27Q92552 414 aaKnown RBP11.77□□□□□ -0.53
CDK7-203ENST00000504147 DPF2Q92785 391 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 GPKOWQ92917 476 aaPredicted RBP eCLIP11.77□□□□□ -0.53
CDK7-203ENST00000504147 TNFRSF25Q93038 417 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 RBSNQ9H1K0 784 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 CPVLQ9H3G5 476 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 GOLPH3LQ9H4A5 285 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 RIOX1Q9H6W3 641 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 VAT1LQ9HCJ6 419 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 GPCPD1Q9NPB8 672 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 BARHL2Q9NY43 387 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 GJA3Q9Y6H8 435 aa11.77□□□□□ -0.53
CDK7-203ENST00000504147 FRMPD2Q68DX3 1309 aaPredicted RBP11.77□□□□□ -0.53
CDK7-203ENST00000504147 CDK5RAP2Q96SN8 1893 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 MYH1P12882 1939 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 STXBP3O00186 592 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 WNT10BO00744 389 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 TBC1D12O60347 775 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 CUTAO60888 179 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 GH2P01242 217 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 ATP2B1P20020 1258 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 CMA1P23946 247 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 JAG1P78504 1218 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 ICA1Q05084 483 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 FAM160A1Q05DH4 1040 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 RRP1BQ14684 758 aaKnown RBP11.76□□□□□ -0.53
CDK7-203ENST00000504147 CAMK4Q16566 473 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 EARS2Q5JPH6 523 aaKnown RBP11.76□□□□□ -0.53
CDK7-203ENST00000504147 GALNT17Q6IS24 598 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 ARHGAP27Q6ZUM4 889 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 BLIDQ8IZY5 108 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 PIP4P2Q8N4L2 257 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 ENGASEQ8NFI3 743 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 PIGSQ96S52 555 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 TMEM39BQ9GZU3 492 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 TNMDQ9H2S6 317 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.76□□□□□ -0.53
CDK7-203ENST00000504147 SEC63Q9UGP8 760 aaKnown RBP11.76□□□□□ -0.53
CDK7-203ENST00000504147 NOL7Q9UMY1 257 aaKnown RBP11.76□□□□□ -0.53
CDK7-203ENST00000504147 PCDHA4Q9UN74 947 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 CEP131Q9UPN4 1083 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 FOCADQ5VW36 1801 aa11.76□□□□□ -0.53
CDK7-203ENST00000504147 FAM205CA6NFA0 338 aa11.75□□□□□ -0.53
CDK7-203ENST00000504147 TRIM75PA6NK02 468 aa11.75□□□□□ -0.53
CDK7-203ENST00000504147 TNNI2P48788 182 aa11.75□□□□□ -0.53
CDK7-203ENST00000504147 SNW1Q13573 536 aaKnown RBP11.75□□□□□ -0.53
CDK7-203ENST00000504147 MAP3K11Q16584 847 aa11.75□□□□□ -0.53
CDK7-203ENST00000504147 CCDC96Q2M329 555 aa11.75□□□□□ -0.53
CDK7-203ENST00000504147 GPATCH4Q5T3I0 446 aaKnown RBP11.75□□□□□ -0.53
CDK7-203ENST00000504147 SLFN13Q68D06 897 aa11.75□□□□□ -0.53
CDK7-203ENST00000504147 TYW1BQ6NUM6 668 aa11.75□□□□□ -0.53
CDK7-203ENST00000504147 MICALL2Q8IY33 904 aa11.75□□□□□ -0.53
CDK7-203ENST00000504147 CCDC148Q8NFR7 591 aa11.75□□□□□ -0.53
CDK7-203ENST00000504147 CCDC12Q8WUD4 166 aaPredicted RBP11.75□□□□□ -0.53
CDK7-203ENST00000504147 DCAF4Q8WV16 495 aa11.75□□□□□ -0.53
CDK7-203ENST00000504147 PGAP2Q9UHJ9 254 aa11.75□□□□□ -0.53
CDK7-203ENST00000504147 CNOT7Q9UIV1 285 aaKnown RBP11.75□□□□□ -0.53
CDK7-203ENST00000504147 PCDHB6Q9Y5E3 794 aa11.75□□□□□ -0.53
CDK7-203ENST00000504147 A0A1B0GVL5 298 aa11.74□□□□□ -0.53
CDK7-203ENST00000504147 ADAMTS3O15072 1205 aa11.74□□□□□ -0.53
CDK7-203ENST00000504147 CTAGE5O15320 804 aa11.74□□□□□ -0.53
CDK7-203ENST00000504147 NAPAP54920 295 aa11.74□□□□□ -0.53
CDK7-203ENST00000504147 NOM1Q5C9Z4 860 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms