RNA–Protein interactions for RNA: ENST00000504110.1

C4orf3-202, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-202ENST00000504110 APOA5Q6Q788 366 aa18.42■□□□□ 0.54
C4orf3-202ENST00000504110 ANKRD23Q86SG2 305 aa18.42■□□□□ 0.54
C4orf3-202ENST00000504110 ZIC5Q96T25 663 aa18.42■□□□□ 0.54
C4orf3-202ENST00000504110 RPAP3Q9H6T3 665 aaPredicted RBP18.42■□□□□ 0.54
C4orf3-202ENST00000504110 ZCCHC17Q9NP64 241 aaKnown RBP18.42■□□□□ 0.54
C4orf3-202ENST00000504110 BRPF3Q9ULD4 1205 aa18.42■□□□□ 0.54
C4orf3-202ENST00000504110 USP17L15C9J2P7 530 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 BTBD19C9JJ37 291 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 USP17L13C9JLJ4 530 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 USP17L11C9JVI0 530 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 USP17L18D6R9N7 530 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 USP17L22D6RA61 530 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 USP17L17D6RBQ6 530 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 USP17L19D6RCP7 530 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 USP17L20D6RJB6 530 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 ZBTB43O43298 467 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 HOXA7P31268 230 aaPredicted RBP18.41■□□□□ 0.54
C4orf3-202ENST00000504110 RCAN1P53805 252 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 ZNF543Q08ER8 600 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 USP17L24Q0WX57 530 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 FAM83BQ5T0W9 1011 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 TREML2Q5T2D2 321 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 GPATCH4Q5T3I0 446 aaKnown RBP18.41■□□□□ 0.54
C4orf3-202ENST00000504110 OTUD7BQ6GQQ9 843 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 NUP133Q8WUM0 1156 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 PTPN18Q99952 460 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 SLC45A1Q9Y2W3 748 aa18.41■□□□□ 0.54
C4orf3-202ENST00000504110 PARP1P09874 1014 aaKnown RBP18.4■□□□□ 0.54
C4orf3-202ENST00000504110 GRM4Q14833 912 aa18.4■□□□□ 0.54
C4orf3-202ENST00000504110 CCDC96Q2M329 555 aa18.4■□□□□ 0.54
C4orf3-202ENST00000504110 ASPRV1Q53RT3 343 aa18.4■□□□□ 0.54
C4orf3-202ENST00000504110 CATSPERGQ6ZRH7 1159 aa18.4■□□□□ 0.54
C4orf3-202ENST00000504110 RASGRP2Q7LDG7 609 aa18.4■□□□□ 0.54
C4orf3-202ENST00000504110 IFNL1Q8IU54 200 aa18.4■□□□□ 0.54
C4orf3-202ENST00000504110 CTCFLQ8NI51 663 aaPredicted RBP18.4■□□□□ 0.54
C4orf3-202ENST00000504110 ZNF274Q96GC6 653 aaPredicted RBP18.4■□□□□ 0.54
C4orf3-202ENST00000504110 NUP88Q99567 741 aaPredicted RBP18.4■□□□□ 0.54
C4orf3-202ENST00000504110 MYL10Q9BUA6 226 aa18.4■□□□□ 0.54
C4orf3-202ENST00000504110 PDHXO00330 501 aa18.39■□□□□ 0.53
C4orf3-202ENST00000504110 IGF2BP3O00425 579 aaKnown RBP eCLIP18.39■□□□□ 0.53
C4orf3-202ENST00000504110 PLA2G6O60733 806 aa18.39■□□□□ 0.53
C4orf3-202ENST00000504110 OSBPP22059 807 aa18.39■□□□□ 0.53
C4orf3-202ENST00000504110 KIF5BP33176 963 aa18.39■□□□□ 0.53
C4orf3-202ENST00000504110 KCTD1Q719H9 257 aa18.39■□□□□ 0.53
C4orf3-202ENST00000504110 MICU3Q86XE3 530 aa18.39■□□□□ 0.53
C4orf3-202ENST00000504110 FAM43AQ8N2R8 423 aa18.39■□□□□ 0.53
C4orf3-202ENST00000504110 CHMP4CQ96CF2 233 aa18.39■□□□□ 0.53
C4orf3-202ENST00000504110 TANGO6Q9C0B7 1094 aa18.39■□□□□ 0.53
C4orf3-202ENST00000504110 FEM1BQ9UK73 627 aa18.39■□□□□ 0.53
C4orf3-202ENST00000504110 PNMA3Q9UL41 463 aa18.39■□□□□ 0.53
C4orf3-202ENST00000504110 ISY1Q9ULR0 285 aaKnown RBP18.39■□□□□ 0.53
C4orf3-202ENST00000504110 NAP1L2Q9ULW6 460 aaPredicted RBP18.39■□□□□ 0.53
C4orf3-202ENST00000504110 PARP14Q460N5 1801 aa18.38■□□□□ 0.53
C4orf3-202ENST00000504110 PALM3A6NDB9 673 aaPredicted RBP18.38■□□□□ 0.53
C4orf3-202ENST00000504110 GOLGA8AA7E2F4 631 aa18.38■□□□□ 0.53
C4orf3-202ENST00000504110 GOLGA8BA8MQT2 603 aa18.38■□□□□ 0.53
C4orf3-202ENST00000504110 PDIA3P30101 505 aaKnown RBP18.38■□□□□ 0.53
C4orf3-202ENST00000504110 IRX3P78415 501 aaPredicted RBP18.38■□□□□ 0.53
C4orf3-202ENST00000504110 PPP2R5BQ15173 497 aa18.38■□□□□ 0.53
C4orf3-202ENST00000504110 FAM160B2Q86V87 743 aa18.38■□□□□ 0.53
C4orf3-202ENST00000504110 FANCBQ8NB91 859 aa18.38■□□□□ 0.53
C4orf3-202ENST00000504110 CHURC1Q8WUH1 139 aa18.38■□□□□ 0.53
C4orf3-202ENST00000504110 LARP6Q9BRS8 491 aaKnown RBP18.38■□□□□ 0.53
C4orf3-202ENST00000504110 FRMPD2Q68DX3 1309 aaPredicted RBP18.38■□□□□ 0.53
C4orf3-202ENST00000504110 MYPNQ86TC9 1320 aa18.38■□□□□ 0.53
C4orf3-202ENST00000504110 NID2Q14112 1375 aa18.38■□□□□ 0.53
C4orf3-202ENST00000504110 TMEM232C9JQI7 657 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 ALDH1A1P00352 501 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 RXRAP19793 462 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 MCM2P49736 904 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 GNAQP50148 359 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 METAP2P50579 478 aaKnown RBP eCLIP18.37■□□□□ 0.53
C4orf3-202ENST00000504110 STAT2P52630 851 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 COG2Q14746 738 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 RTN1Q16799 776 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 BTNL9Q6UXG8 535 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 RAB11FIP4Q86YS3 637 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 DNAJC5GQ8N7S2 189 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 ASCC2Q9H1I8 757 aaPredicted RBP18.37■□□□□ 0.53
C4orf3-202ENST00000504110 GPCPD1Q9NPB8 672 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 RBM28Q9NW13 759 aaKnown RBP18.37■□□□□ 0.53
C4orf3-202ENST00000504110 MAD2L2Q9UI95 211 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 TPCN1Q9ULQ1 816 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 LIMCH1Q9UPQ0 1083 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 HPS5Q9UPZ3 1129 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 RLFQ13129 1914 aa18.37■□□□□ 0.53
C4orf3-202ENST00000504110 FLOT1O75955 427 aa18.36■□□□□ 0.53
C4orf3-202ENST00000504110 GOLGA8HP0CJ92 632 aa18.36■□□□□ 0.53
C4orf3-202ENST00000504110 IKQ13123 557 aaPredicted RBP18.36■□□□□ 0.53
C4orf3-202ENST00000504110 TTBK2Q6IQ55 1244 aa18.36■□□□□ 0.53
C4orf3-202ENST00000504110 NOL8Q76FK4 1167 aaKnown RBP18.36■□□□□ 0.53
C4orf3-202ENST00000504110 CCDC144CPQ8IYA2 1237 aa18.36■□□□□ 0.53
C4orf3-202ENST00000504110 STAG2Q8N3U4 1231 aa18.36■□□□□ 0.53
C4orf3-202ENST00000504110 PRPF38AQ8NAV1 312 aaKnown RBP18.36■□□□□ 0.53
C4orf3-202ENST00000504110 ZSCAN31Q96LW9 406 aaPredicted RBP18.36■□□□□ 0.53
C4orf3-202ENST00000504110 PARK7Q99497 189 aaKnown RBP18.36■□□□□ 0.53
C4orf3-202ENST00000504110 SLF1Q9BQI6 1058 aa18.36■□□□□ 0.53
C4orf3-202ENST00000504110 HOXC10Q9NYD6 342 aa18.36■□□□□ 0.53
C4orf3-202ENST00000504110 PPP1R9AQ9ULJ8 1098 aa18.36■□□□□ 0.53
C4orf3-202ENST00000504110 CCDC196A0A1B0GTZ2 297 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms