RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 SHCBP1Q8NEM2 672 aa26.28■■□□□ 1.8
LSM6-203ENST00000503982 MROH8Q9H579 483 aa26.28■■□□□ 1.8
LSM6-203ENST00000503982 CLIP2Q9UDT6 1046 aa26.28■■□□□ 1.8
LSM6-203ENST00000503982 OGDHLQ9ULD0 1010 aa26.28■■□□□ 1.8
LSM6-203ENST00000503982 ROBO3Q96MS0 1386 aa26.28■■□□□ 1.8
LSM6-203ENST00000503982 PDE4BQ07343 736 aa26.27■■□□□ 1.8
LSM6-203ENST00000503982 C7orf61Q8IZ16 206 aa26.27■■□□□ 1.8
LSM6-203ENST00000503982 FBXO28Q9NVF7 368 aa26.27■■□□□ 1.8
LSM6-203ENST00000503982 ISY1Q9ULR0 285 aaKnown RBP26.27■■□□□ 1.8
LSM6-203ENST00000503982 CTDP1Q9Y5B0 961 aaPredicted RBP26.27■■□□□ 1.8
LSM6-203ENST00000503982 ZNF236Q9UL36 1845 aa26.26■■□□□ 1.79
LSM6-203ENST00000503982 CYP2C19P33261 490 aa26.26■■□□□ 1.79
LSM6-203ENST00000503982 HDAC1Q13547 482 aaPredicted RBP26.26■■□□□ 1.79
LSM6-203ENST00000503982 ZMYM1Q5SVZ6 1142 aa26.26■■□□□ 1.79
LSM6-203ENST00000503982 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.26■■□□□ 1.79
LSM6-203ENST00000503982 NYAP2Q9P242 653 aa26.26■■□□□ 1.79
LSM6-203ENST00000503982 SLC25A27O95847 323 aa26.25■■□□□ 1.79
LSM6-203ENST00000503982 TSPY3P0CV98 308 aa26.25■■□□□ 1.79
LSM6-203ENST00000503982 TSPY8P0CW00 308 aa26.25■■□□□ 1.79
LSM6-203ENST00000503982 TMEM132BQ14DG7 1078 aa26.25■■□□□ 1.79
LSM6-203ENST00000503982 CCDC129Q6ZRS4 1044 aa26.25■■□□□ 1.79
LSM6-203ENST00000503982 EVI5LQ96CN4 794 aa26.25■■□□□ 1.79
LSM6-203ENST00000503982 NUP88Q99567 741 aaPredicted RBP26.25■■□□□ 1.79
LSM6-203ENST00000503982 PPP1R9AQ9ULJ8 1098 aa26.25■■□□□ 1.79
LSM6-203ENST00000503982 HOXC6P09630 235 aa26.24■■□□□ 1.79
LSM6-203ENST00000503982 FCER1AP12319 257 aa26.24■■□□□ 1.79
LSM6-203ENST00000503982 SLC4A3P48751 1232 aa26.24■■□□□ 1.79
LSM6-203ENST00000503982 F5H6K3 240 aa26.23■■□□□ 1.79
LSM6-203ENST00000503982 KLRC3Q07444 240 aa26.23■■□□□ 1.79
LSM6-203ENST00000503982 PPARAQ07869 468 aa26.23■■□□□ 1.79
LSM6-203ENST00000503982 AAMPQ13685 434 aa26.23■■□□□ 1.79
LSM6-203ENST00000503982 B4GALNT3Q6L9W6 998 aa26.23■■□□□ 1.79
LSM6-203ENST00000503982 MMP19Q99542 508 aa26.23■■□□□ 1.79
LSM6-203ENST00000503982 LNPKQ9C0E8 428 aa26.23■■□□□ 1.79
LSM6-203ENST00000503982 RWDD1Q9H446 243 aaPredicted RBP26.23■■□□□ 1.79
LSM6-203ENST00000503982 SALL3Q9BXA9 1300 aa26.22■■□□□ 1.79
LSM6-203ENST00000503982 PLXNA1Q9UIW2 1896 aa26.22■■□□□ 1.79
LSM6-203ENST00000503982 NDUFB10O96000 172 aa26.22■■□□□ 1.79
LSM6-203ENST00000503982 STAT3P40763 770 aa26.22■■□□□ 1.79
LSM6-203ENST00000503982 PDE1AP54750 535 aa26.22■■□□□ 1.79
LSM6-203ENST00000503982 FAM47AQ5JRC9 791 aa26.22■■□□□ 1.79
LSM6-203ENST00000503982 LHX8Q68G74 356 aa26.22■■□□□ 1.79
LSM6-203ENST00000503982 SLF1Q9BQI6 1058 aa26.22■■□□□ 1.79
LSM6-203ENST00000503982 RBM27Q9P2N5 1060 aaKnown RBP26.22■■□□□ 1.79
LSM6-203ENST00000503982 DDX20Q9UHI6 824 aaKnown RBP26.22■■□□□ 1.79
LSM6-203ENST00000503982 TRIM6-TRIM34B2RNG4 842 aa26.21■■□□□ 1.79
LSM6-203ENST00000503982 VWA5AO00534 786 aa26.21■■□□□ 1.79
LSM6-203ENST00000503982 MSCO60682 206 aa26.21■■□□□ 1.79
LSM6-203ENST00000503982 LRRC47Q8N1G4 583 aaKnown RBP26.21■■□□□ 1.79
LSM6-203ENST00000503982 CEP95Q96GE4 821 aa26.21■■□□□ 1.79
LSM6-203ENST00000503982 ZMYND8Q9ULU4 1186 aaPredicted RBP26.21■■□□□ 1.79
LSM6-203ENST00000503982 COBLO75128 1261 aa26.2■■□□□ 1.78
LSM6-203ENST00000503982 TTLL1O95922 423 aa26.2■■□□□ 1.78
LSM6-203ENST00000503982 MYCNP04198 464 aaPredicted RBP26.2■■□□□ 1.78
LSM6-203ENST00000503982 MNX1P50219 401 aaPredicted RBP26.2■■□□□ 1.78
LSM6-203ENST00000503982 TFAP4Q01664 338 aa26.2■■□□□ 1.78
LSM6-203ENST00000503982 KCTD2Q14681 263 aa26.2■■□□□ 1.78
LSM6-203ENST00000503982 ABRAQ8N0Z2 381 aa26.2■■□□□ 1.78
LSM6-203ENST00000503982 RILPL2Q969X0 211 aa26.2■■□□□ 1.78
LSM6-203ENST00000503982 STAP2Q9UGK3 403 aa26.2■■□□□ 1.78
LSM6-203ENST00000503982 SUPT16HQ9Y5B9 1047 aaKnown RBP26.2■■□□□ 1.78
LSM6-203ENST00000503982 COPB2P35606 906 aa26.19■■□□□ 1.78
LSM6-203ENST00000503982 CTDSPL2Q05D32 466 aa26.19■■□□□ 1.78
LSM6-203ENST00000503982 OLFML2BQ68BL8 750 aa26.19■■□□□ 1.78
LSM6-203ENST00000503982 RIOX2Q8IUF8 465 aa26.19■■□□□ 1.78
LSM6-203ENST00000503982 KIFC2Q96AC6 838 aa26.19■■□□□ 1.78
LSM6-203ENST00000503982 CHMP4CQ96CF2 233 aa26.19■■□□□ 1.78
LSM6-203ENST00000503982 MTMR4Q9NYA4 1195 aa26.19■■□□□ 1.78
LSM6-203ENST00000503982 IGKV6D-41A0A0C4DH26 115 aa26.18■■□□□ 1.78
LSM6-203ENST00000503982 TSPY2A6NKD2 308 aa26.18■■□□□ 1.78
LSM6-203ENST00000503982 ZBED4O75132 1171 aa26.18■■□□□ 1.78
LSM6-203ENST00000503982 FXR1P51114 621 aaKnown RBP eCLIP26.18■■□□□ 1.78
LSM6-203ENST00000503982 CPXCR1Q8N123 301 aa26.18■■□□□ 1.78
LSM6-203ENST00000503982 NEDD1Q8NHV4 660 aa26.18■■□□□ 1.78
LSM6-203ENST00000503982 ADAMTS5Q9UNA0 930 aa26.18■■□□□ 1.78
LSM6-203ENST00000503982 TRIOBPQ9H2D6 2365 aa26.18■■□□□ 1.78
LSM6-203ENST00000503982 PFASO15067 1338 aa26.17■■□□□ 1.78
LSM6-203ENST00000503982 PGK2P07205 417 aa26.17■■□□□ 1.78
LSM6-203ENST00000503982 CYBAP13498 195 aa26.17■■□□□ 1.78
LSM6-203ENST00000503982 SYN1P17600 705 aa26.17■■□□□ 1.78
LSM6-203ENST00000503982 IKQ13123 557 aaPredicted RBP26.17■■□□□ 1.78
LSM6-203ENST00000503982 ANO1Q5XXA6 986 aa26.17■■□□□ 1.78
LSM6-203ENST00000503982 SNRNP48Q6IEG0 339 aaKnown RBP26.17■■□□□ 1.78
LSM6-203ENST00000503982 PRPF38AQ8NAV1 312 aaKnown RBP26.17■■□□□ 1.78
LSM6-203ENST00000503982 TRPV1Q8NER1 839 aa26.17■■□□□ 1.78
LSM6-203ENST00000503982 MAML3Q96JK9 1138 aa26.17■■□□□ 1.78
LSM6-203ENST00000503982 HELLSQ9NRZ9 838 aa26.17■■□□□ 1.78
LSM6-203ENST00000503982 TOMM22Q9NS69 142 aa26.17■■□□□ 1.78
LSM6-203ENST00000503982 SLFN13Q68D06 897 aa26.16■■□□□ 1.78
LSM6-203ENST00000503982 EXOC6Q8TAG9 804 aa26.16■■□□□ 1.78
LSM6-203ENST00000503982 SENP6Q9GZR1 1112 aaPredicted RBP26.16■■□□□ 1.78
LSM6-203ENST00000503982 ZNF214Q9UL59 606 aaPredicted RBP26.16■■□□□ 1.78
LSM6-203ENST00000503982 PRAMEF19Q5SWL8 479 aa26.15■■□□□ 1.78
LSM6-203ENST00000503982 VPS53Q5VIR6 699 aa26.15■■□□□ 1.78
LSM6-203ENST00000503982 DDX11Q96FC9 970 aa26.15■■□□□ 1.78
LSM6-203ENST00000503982 TEX13BQ9BXU2 312 aa26.15■■□□□ 1.78
LSM6-203ENST00000503982 FEM1BQ9UK73 627 aa26.15■■□□□ 1.78
LSM6-203ENST00000503982 STX8Q9UNK0 236 aa26.15■■□□□ 1.78
LSM6-203ENST00000503982 RANBP6O60518 1105 aaKnown RBP26.14■■□□□ 1.78
LSM6-203ENST00000503982 BMP3P12645 472 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms