RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 ARMT1Q9H993 441 aa15.73■□□□□ 0.11
TRIO-205ENST00000503399 PHF24Q9UPV7 400 aa15.73■□□□□ 0.11
TRIO-205ENST00000503399 TACC3Q9Y6A5 838 aa15.73■□□□□ 0.11
TRIO-205ENST00000503399 PRUNE2Q8WUY3 3088 aa15.73■□□□□ 0.11
TRIO-205ENST00000503399 WDR46O15213 610 aaKnown RBP15.72■□□□□ 0.11
TRIO-205ENST00000503399 SLC25A27O95847 323 aa15.72■□□□□ 0.11
TRIO-205ENST00000503399 RAG1P15918 1043 aa15.72■□□□□ 0.11
TRIO-205ENST00000503399 ITGB8P26012 769 aa15.72■□□□□ 0.11
TRIO-205ENST00000503399 TMEM132BQ14DG7 1078 aa15.72■□□□□ 0.11
TRIO-205ENST00000503399 C1orf53Q5VUE5 145 aa15.72■□□□□ 0.11
TRIO-205ENST00000503399 LENG1Q96BZ8 264 aaPredicted RBP15.72■□□□□ 0.11
TRIO-205ENST00000503399 TMX2Q9Y320 296 aa15.72■□□□□ 0.11
TRIO-205ENST00000503399 COL11A1P12107 1806 aaPredicted RBP15.72■□□□□ 0.11
TRIO-205ENST00000503399 ZNFX1Q9P2E3 1918 aaKnown RBP15.72■□□□□ 0.11
TRIO-205ENST00000503399 PARP14Q460N5 1801 aa15.71■□□□□ 0.11
TRIO-205ENST00000503399 A0A1W2PQ45 241 aaPredicted RBP15.71■□□□□ 0.11
TRIO-205ENST00000503399 A0A1W2PQY0 241 aa15.71■□□□□ 0.11
TRIO-205ENST00000503399 TCRBV5S4A2TA0A5A2 114 aa15.71■□□□□ 0.11
TRIO-205ENST00000503399 PRKAB2O43741 272 aa15.71■□□□□ 0.11
TRIO-205ENST00000503399 TAL1P17542 331 aaPredicted RBP15.71■□□□□ 0.11
TRIO-205ENST00000503399 KCTD2Q14681 263 aa15.71■□□□□ 0.11
TRIO-205ENST00000503399 HSP90AB4PQ58FF6 505 aa15.71■□□□□ 0.11
TRIO-205ENST00000503399 SIAH1Q8IUQ4 282 aa15.71■□□□□ 0.11
TRIO-205ENST00000503399 RHPN1Q8TCX5 695 aa15.71■□□□□ 0.11
TRIO-205ENST00000503399 FBXO28Q9NVF7 368 aa15.71■□□□□ 0.11
TRIO-205ENST00000503399 SMCHD1A6NHR9 2005 aa15.71■□□□□ 0.11
TRIO-205ENST00000503399 CDH23Q9H251 3354 aa15.71■□□□□ 0.11
TRIO-205ENST00000503399 BAZ2AQ9UIF9 1905 aaKnown RBP15.7■□□□□ 0.1
TRIO-205ENST00000503399 PLXNA1Q9UIW2 1896 aa15.7■□□□□ 0.1
TRIO-205ENST00000503399 CYP2D7A0A087X1C5 515 aa15.7■□□□□ 0.1
TRIO-205ENST00000503399 MBD4O95243 580 aa15.7■□□□□ 0.1
TRIO-205ENST00000503399 IFIT2P09913 472 aaKnown RBP15.7■□□□□ 0.1
TRIO-205ENST00000503399 EPHB4P54760 987 aa15.7■□□□□ 0.1
TRIO-205ENST00000503399 FPGSQ05932 587 aa15.7■□□□□ 0.1
TRIO-205ENST00000503399 SLFNL1Q499Z3 407 aa15.7■□□□□ 0.1
TRIO-205ENST00000503399 AMOTL1Q8IY63 956 aa15.7■□□□□ 0.1
TRIO-205ENST00000503399 CLASRPQ8N2M8 674 aaKnown RBP15.7■□□□□ 0.1
TRIO-205ENST00000503399 TINF2Q9BSI4 451 aa15.7■□□□□ 0.1
TRIO-205ENST00000503399 TMEM39AQ9NV64 488 aa15.7■□□□□ 0.1
TRIO-205ENST00000503399 NRBP1Q9UHY1 535 aa15.7■□□□□ 0.1
TRIO-205ENST00000503399 SMIM22K7EJ46 135 aa15.69■□□□□ 0.1
TRIO-205ENST00000503399 EEF2P13639 858 aaKnown RBP15.69■□□□□ 0.1
TRIO-205ENST00000503399 AKR1A1P14550 325 aa15.69■□□□□ 0.1
TRIO-205ENST00000503399 CDK8P49336 464 aa15.69■□□□□ 0.1
TRIO-205ENST00000503399 RIOX2Q8IUF8 465 aa15.69■□□□□ 0.1
TRIO-205ENST00000503399 CCDC17Q96LX7 622 aa15.69■□□□□ 0.1
TRIO-205ENST00000503399 GOPCQ9HD26 462 aa15.69■□□□□ 0.1
TRIO-205ENST00000503399 ATP8A2Q9NTI2 1148 aa15.69■□□□□ 0.1
TRIO-205ENST00000503399 CNPY2Q9Y2B0 182 aa15.69■□□□□ 0.1
TRIO-205ENST00000503399 TMEM265A0A087WTH1 108 aa15.68■□□□□ 0.1
TRIO-205ENST00000503399 KIAA0355O15063 1070 aa15.68■□□□□ 0.1
TRIO-205ENST00000503399 STAT3P40763 770 aa15.68■□□□□ 0.1
TRIO-205ENST00000503399 ZNF792Q3KQV3 632 aa15.68■□□□□ 0.1
TRIO-205ENST00000503399 FAM83BQ5T0W9 1011 aa15.68■□□□□ 0.1
TRIO-205ENST00000503399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.68■□□□□ 0.1
TRIO-205ENST00000503399 DDRGK1Q96HY6 314 aa15.68■□□□□ 0.1
TRIO-205ENST00000503399 STARD7Q9NQZ5 370 aa15.68■□□□□ 0.1
TRIO-205ENST00000503399 PPP1R9AQ9ULJ8 1098 aa15.68■□□□□ 0.1
TRIO-205ENST00000503399 ROBO3Q96MS0 1386 aa15.67■□□□□ 0.1
TRIO-205ENST00000503399 DCDC2CA8MYV0 355 aa15.67■□□□□ 0.1
TRIO-205ENST00000503399 USP17L12C9JPN9 530 aa15.67■□□□□ 0.1
TRIO-205ENST00000503399 USP17L21D6R901 530 aa15.67■□□□□ 0.1
TRIO-205ENST00000503399 VWA5AO00534 786 aa15.67■□□□□ 0.1
TRIO-205ENST00000503399 ZNF865P0CJ78 1059 aaPredicted RBP15.67■□□□□ 0.1
TRIO-205ENST00000503399 DNAJB2P25686 324 aa15.67■□□□□ 0.1
TRIO-205ENST00000503399 ADD2P35612 726 aa15.67■□□□□ 0.1
TRIO-205ENST00000503399 SLC4A3P48751 1232 aa15.67■□□□□ 0.1
TRIO-205ENST00000503399 C12orf60Q5U649 245 aa15.67■□□□□ 0.1
TRIO-205ENST00000503399 PANK1Q8TE04 598 aa15.67■□□□□ 0.1
TRIO-205ENST00000503399 KIF1BPQ96EK5 621 aa15.67■□□□□ 0.1
TRIO-205ENST00000503399 BOLA2Q9H3K6 86 aa15.67■□□□□ 0.1
TRIO-205ENST00000503399 PAG1Q9NWQ8 432 aa15.67■□□□□ 0.1
TRIO-205ENST00000503399 ZHX1Q9UKY1 873 aaPredicted RBP15.67■□□□□ 0.1
TRIO-205ENST00000503399 DIS3Q9Y2L1 958 aaKnown RBP15.67■□□□□ 0.1
TRIO-205ENST00000503399 SPTBN5Q9NRC6 3674 aaKnown RBP15.67■□□□□ 0.1
TRIO-205ENST00000503399 SYNRGQ9UMZ2 1314 aa15.67■□□□□ 0.1
TRIO-205ENST00000503399 ADAMTS4O75173 837 aa15.66■□□□□ 0.1
TRIO-205ENST00000503399 COPB2P35606 906 aa15.66■□□□□ 0.1
TRIO-205ENST00000503399 ACLYP53396 1101 aa15.66■□□□□ 0.1
TRIO-205ENST00000503399 GRIN2CQ14957 1233 aa15.66■□□□□ 0.1
TRIO-205ENST00000503399 C16orf86Q6ZW13 317 aa15.66■□□□□ 0.1
TRIO-205ENST00000503399 NUP133Q8WUM0 1156 aa15.66■□□□□ 0.1
TRIO-205ENST00000503399 SYMPKQ92797 1274 aaKnown RBP15.66■□□□□ 0.1
TRIO-205ENST00000503399 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.66■□□□□ 0.1
TRIO-205ENST00000503399 KANSL2Q9H9L4 492 aa15.66■□□□□ 0.1
TRIO-205ENST00000503399 PRDM6Q9NQX0 595 aa15.66■□□□□ 0.1
TRIO-205ENST00000503399 ZNF214Q9UL59 606 aaPredicted RBP15.66■□□□□ 0.1
TRIO-205ENST00000503399 ADAMTS5Q9UNA0 930 aa15.66■□□□□ 0.1
TRIO-205ENST00000503399 SLC4A4Q9Y6R1 1079 aa15.66■□□□□ 0.1
TRIO-205ENST00000503399 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.65■□□□□ 0.1
TRIO-205ENST00000503399 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.65■□□□□ 0.1
TRIO-205ENST00000503399 FAAP100Q0VG06 881 aa15.65■□□□□ 0.1
TRIO-205ENST00000503399 SNRNP48Q6IEG0 339 aaKnown RBP15.65■□□□□ 0.1
TRIO-205ENST00000503399 USP38Q8NB14 1042 aa15.65■□□□□ 0.1
TRIO-205ENST00000503399 DDX11Q96FC9 970 aa15.65■□□□□ 0.1
TRIO-205ENST00000503399 NUP88Q99567 741 aaPredicted RBP15.65■□□□□ 0.1
TRIO-205ENST00000503399 FAM184BQ9ULE4 1060 aa15.65■□□□□ 0.1
TRIO-205ENST00000503399 CHGBP05060 677 aa15.64■□□□□ 0.09
TRIO-205ENST00000503399 HNRNPUQ00839 825 aaKnown RBP eCLIP15.64■□□□□ 0.09
TRIO-205ENST00000503399 KCNA10Q16322 511 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms