RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 SNED1Q8TER0 1413 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 TRIM75PA6NK02 468 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 GOLGA6L6A8MZA4 724 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 TPM3P06753 285 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 NLRP12P59046 1061 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 EARS2Q5JPH6 523 aaKnown RBP13.22□□□□□ -0.29
USP46-204ENST00000503060 MSL1Q68DK7 614 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 SARM1Q6SZW1 724 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
USP46-204ENST00000503060 MKL1Q969V6 931 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 TTC12Q9H892 705 aaPredicted RBP13.22□□□□□ -0.29
USP46-204ENST00000503060 SRPRBQ9Y5M8 271 aaKnown RBP13.22□□□□□ -0.29
USP46-204ENST00000503060 GOLGA6CA6NDK9 693 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 GOLGA6BA6NDN3 693 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 GOLGA6DP0CG33 693 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 RXRBP28702 533 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 GNAQP50148 359 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 GRIN1Q05586 938 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.22□□□□□ -0.29
USP46-204ENST00000503060 CERS5Q8N5B7 392 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 EYA3Q99504 573 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 GOLGA6AQ9NYA3 693 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 FAM13BQ9NYF5 915 aa13.22□□□□□ -0.29
USP46-204ENST00000503060 DOK7Q18PE1 504 aa13.21□□□□□ -0.29
USP46-204ENST00000503060 DPCR1Q3MIW9 517 aa13.21□□□□□ -0.29
USP46-204ENST00000503060 STAG2Q8N3U4 1231 aa13.21□□□□□ -0.29
USP46-204ENST00000503060 AOPEPQ8N6M6 819 aa13.21□□□□□ -0.29
USP46-204ENST00000503060 NEDD1Q8NHV4 660 aa13.21□□□□□ -0.29
USP46-204ENST00000503060 PIBF1Q8WXW3 757 aa13.21□□□□□ -0.29
USP46-204ENST00000503060 TMEM47Q9BQJ4 181 aa13.21□□□□□ -0.29
USP46-204ENST00000503060 BPIFA3Q9BQP9 254 aa13.21□□□□□ -0.29
USP46-204ENST00000503060 TMX4Q9H1E5 349 aaPredicted RBP13.21□□□□□ -0.29
USP46-204ENST00000503060 TUBE1Q9UJT0 475 aa13.21□□□□□ -0.29
USP46-204ENST00000503060 STK24Q9Y6E0 443 aa13.21□□□□□ -0.29
USP46-204ENST00000503060 BIN1O00499 593 aa13.21□□□□□ -0.3
USP46-204ENST00000503060 VEGFAP15692 232 aaPredicted RBP13.21□□□□□ -0.3
USP46-204ENST00000503060 NLRP5P59047 1200 aa13.21□□□□□ -0.3
USP46-204ENST00000503060 KIAA2012Q0VF49 1180 aa13.21□□□□□ -0.3
USP46-204ENST00000503060 SPECC1Q5M775 1068 aa13.21□□□□□ -0.3
USP46-204ENST00000503060 MAD2L2Q9UI95 211 aa13.21□□□□□ -0.3
USP46-204ENST00000503060 MYH1P12882 1939 aa13.21□□□□□ -0.3
USP46-204ENST00000503060 QSER1Q2KHR3 1735 aa13.21□□□□□ -0.3
USP46-204ENST00000503060 F8W031 263 aaPredicted RBP13.2□□□□□ -0.3
USP46-204ENST00000503060 OFD1O75665 1012 aa13.2□□□□□ -0.3
USP46-204ENST00000503060 ZNF280DQ6N043 979 aa13.2□□□□□ -0.3
USP46-204ENST00000503060 ELOA2Q8IYF1 753 aaPredicted RBP13.2□□□□□ -0.3
USP46-204ENST00000503060 CNNM3Q8NE01 707 aa13.2□□□□□ -0.3
USP46-204ENST00000503060 MORC4Q8TE76 937 aa13.2□□□□□ -0.3
USP46-204ENST00000503060 PNMA2Q9UL42 364 aa13.2□□□□□ -0.3
USP46-204ENST00000503060 STX8Q9UNK0 236 aa13.2□□□□□ -0.3
USP46-204ENST00000503060 TNS1Q9HBL0 1735 aaKnown RBP13.2□□□□□ -0.3
USP46-204ENST00000503060 FOCADQ5VW36 1801 aa13.2□□□□□ -0.3
USP46-204ENST00000503060 BMP15O95972 392 aa13.2□□□□□ -0.3
USP46-204ENST00000503060 CDC25BP30305 580 aa13.2□□□□□ -0.3
USP46-204ENST00000503060 PNOCQ13519 176 aa13.2□□□□□ -0.3
USP46-204ENST00000503060 NOM1Q5C9Z4 860 aaKnown RBP13.2□□□□□ -0.3
USP46-204ENST00000503060 CCDC181Q5TID7 509 aa13.2□□□□□ -0.3
USP46-204ENST00000503060 METTL16Q86W50 562 aaKnown RBP13.2□□□□□ -0.3
USP46-204ENST00000503060 C2CD5Q86YS7 1000 aa13.2□□□□□ -0.3
USP46-204ENST00000503060 MSL3Q8N5Y2 521 aaKnown RBP13.2□□□□□ -0.3
USP46-204ENST00000503060 CXorf38Q8TB03 319 aa13.2□□□□□ -0.3
USP46-204ENST00000503060 TTF2Q9UNY4 1162 aaKnown RBP13.2□□□□□ -0.3
USP46-204ENST00000503060 PALM3A6NDB9 673 aaPredicted RBP13.19□□□□□ -0.3
USP46-204ENST00000503060 HMGB1P1B2RPK0 211 aaPredicted RBP13.19□□□□□ -0.3
USP46-204ENST00000503060 SCP2P22307 547 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 ZFYVE27Q5T4F4 411 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 DNAJC14Q6Y2X3 702 aaPredicted RBP13.19□□□□□ -0.3
USP46-204ENST00000503060 ZNF662Q6ZS27 426 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 DRC7Q8IY82 874 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 MXD3Q9BW11 206 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 SH3GLB2Q9NR46 395 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 G3V3G9 751 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 WNT7AO00755 349 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 CALML3P27482 149 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 SLC35G1Q2M3R5 365 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 TTC38Q5R3I4 469 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 DCAF8Q5TAQ9 597 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 MRFAP1L1Q96HT8 127 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 LZTS2Q9BRK4 669 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 CSRNP2Q9H175 543 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 KCNF1Q9H3M0 494 aa13.19□□□□□ -0.3
USP46-204ENST00000503060 BAZ2BQ9UIF8 2168 aaKnown RBP13.19□□□□□ -0.3
USP46-204ENST00000503060 RGPD3A6NKT7 1758 aaPredicted RBP13.18□□□□□ -0.3
USP46-204ENST00000503060 RGPD4Q7Z3J3 1758 aa13.18□□□□□ -0.3
USP46-204ENST00000503060 PICALMQ13492 652 aa13.18□□□□□ -0.3
USP46-204ENST00000503060 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.18□□□□□ -0.3
USP46-204ENST00000503060 HOOK1Q9UJC3 728 aaKnown RBP13.18□□□□□ -0.3
USP46-204ENST00000503060 POLR2DO15514 142 aaKnown RBP13.18□□□□□ -0.3
USP46-204ENST00000503060 PTGS1P23219 599 aa13.18□□□□□ -0.3
USP46-204ENST00000503060 TRAPPC10P48553 1259 aa13.18□□□□□ -0.3
USP46-204ENST00000503060 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
USP46-204ENST00000503060 ZNF174Q15697 407 aa13.18□□□□□ -0.3
USP46-204ENST00000503060 STYK1Q6J9G0 422 aa13.18□□□□□ -0.3
USP46-204ENST00000503060 BLIDQ8IZY5 108 aa13.18□□□□□ -0.3
USP46-204ENST00000503060 GPKOWQ92917 476 aaPredicted RBP eCLIP13.18□□□□□ -0.3
USP46-204ENST00000503060 FERMT2Q96AC1 680 aa13.18□□□□□ -0.3
USP46-204ENST00000503060 CLIP2Q9UDT6 1046 aa13.18□□□□□ -0.3
USP46-204ENST00000503060 H0YIN7 160 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 ADAMTS3O15072 1205 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 CYTH3O43739 400 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms