RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 MARCKSP29966 332 aaPredicted RBP25.27■■□□□ 1.64
PTPN13-205ENST00000502971 CERKLQ49MI3 558 aaPredicted RBP25.27■■□□□ 1.64
PTPN13-205ENST00000502971 USP17L2Q6R6M4 530 aa25.27■■□□□ 1.64
PTPN13-205ENST00000502971 CCDC148Q8NFR7 591 aa25.27■■□□□ 1.64
PTPN13-205ENST00000502971 NOL7Q9UMY1 257 aaKnown RBP25.27■■□□□ 1.64
PTPN13-205ENST00000502971 USP17L5A8MUK1 530 aa25.26■■□□□ 1.63
PTPN13-205ENST00000502971 CXCL9Q07325 125 aa25.26■■□□□ 1.63
PTPN13-205ENST00000502971 GALNT17Q6IS24 598 aa25.26■■□□□ 1.63
PTPN13-205ENST00000502971 ZBTB12Q9Y330 459 aaPredicted RBP25.26■■□□□ 1.63
PTPN13-205ENST00000502971 MMP14P50281 582 aa25.26■■□□□ 1.63
PTPN13-205ENST00000502971 CIAPIN1Q6FI81 312 aa25.26■■□□□ 1.63
PTPN13-205ENST00000502971 ARHGAP27Q6ZUM4 889 aa25.26■■□□□ 1.63
PTPN13-205ENST00000502971 ZNF70Q9UC06 446 aaPredicted RBP25.26■■□□□ 1.63
PTPN13-205ENST00000502971 A0A1B0GVL5 298 aa25.25■■□□□ 1.63
PTPN13-205ENST00000502971 UVSSAQ2YD98 709 aa25.25■■□□□ 1.63
PTPN13-205ENST00000502971 LRRC47Q8N1G4 583 aaKnown RBP25.25■■□□□ 1.63
PTPN13-205ENST00000502971 RRP36Q96EU6 259 aaKnown RBP25.25■■□□□ 1.63
PTPN13-205ENST00000502971 BARHL2Q9NY43 387 aa25.25■■□□□ 1.63
PTPN13-205ENST00000502971 VEGFAP15692 232 aaPredicted RBP25.24■■□□□ 1.63
PTPN13-205ENST00000502971 NDUFA8P51970 172 aa25.24■■□□□ 1.63
PTPN13-205ENST00000502971 SPDYE2Q495Y8 402 aa25.24■■□□□ 1.63
PTPN13-205ENST00000502971 FKBP1CQ5VVH2 108 aa25.24■■□□□ 1.63
PTPN13-205ENST00000502971 KRI1Q8N9T8 703 aaKnown RBP25.24■■□□□ 1.63
PTPN13-205ENST00000502971 RIOX1Q9H6W3 641 aa25.24■■□□□ 1.63
PTPN13-205ENST00000502971 KANSL2Q9H9L4 492 aa25.24■■□□□ 1.63
PTPN13-205ENST00000502971 PCDHA4Q9UN74 947 aa25.24■■□□□ 1.63
PTPN13-205ENST00000502971 PCDHB6Q9Y5E3 794 aa25.24■■□□□ 1.63
PTPN13-205ENST00000502971 FAM237AA0A1B0GTK4 181 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 TRIM75PA6NK02 468 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 BMP15O95972 392 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 EIF6P56537 245 aaKnown RBP25.23■■□□□ 1.63
PTPN13-205ENST00000502971 RASSF7Q02833 373 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 TNIP1Q15025 636 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 WWC2Q6AWC2 1192 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 CKAP2LQ8IYA6 745 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 BLIDQ8IZY5 108 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 DAGLBQ8NCG7 672 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 RNF214Q8ND24 703 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 FAM151AQ8WW52 585 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 GPKOWQ92917 476 aaPredicted RBP eCLIP25.23■■□□□ 1.63
PTPN13-205ENST00000502971 MKL1Q969V6 931 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 NYAP2Q9P242 653 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 LMNB1P20700 586 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 TRAPPC10P48553 1259 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 TMEM179Q6ZVK1 233 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 RASGRP2Q7LDG7 609 aa25.23■■□□□ 1.63
PTPN13-205ENST00000502971 CCDC12Q8WUD4 166 aaPredicted RBP25.23■■□□□ 1.63
PTPN13-205ENST00000502971 SEC63Q9UGP8 760 aaKnown RBP25.23■■□□□ 1.63
PTPN13-205ENST00000502971 HERC5Q9UII4 1024 aaKnown RBP25.23■■□□□ 1.63
PTPN13-205ENST00000502971 BAZ2BQ9UIF8 2168 aaKnown RBP25.22■■□□□ 1.63
PTPN13-205ENST00000502971 STXBP3O00186 592 aa25.22■■□□□ 1.63
PTPN13-205ENST00000502971 PFKFB1P16118 471 aa25.22■■□□□ 1.63
PTPN13-205ENST00000502971 YBX3P16989 372 aaKnown RBP eCLIP25.22■■□□□ 1.63
PTPN13-205ENST00000502971 TYRO3Q06418 890 aa25.22■■□□□ 1.63
PTPN13-205ENST00000502971 EARS2Q5JPH6 523 aaKnown RBP25.22■■□□□ 1.63
PTPN13-205ENST00000502971 RESP18Q5W5W9 173 aa25.22■■□□□ 1.63
PTPN13-205ENST00000502971 SASS6Q6UVJ0 657 aa25.22■■□□□ 1.63
PTPN13-205ENST00000502971 HEATR3Q7Z4Q2 680 aa25.22■■□□□ 1.63
PTPN13-205ENST00000502971 CLEC10AQ8IUN9 316 aa25.22■■□□□ 1.63
PTPN13-205ENST00000502971 CSRNP1Q96S65 589 aa25.22■■□□□ 1.63
PTPN13-205ENST00000502971 FAM196BA6NMK8 535 aa25.21■■□□□ 1.63
PTPN13-205ENST00000502971 TCP10L2B9ZVM9 353 aa25.21■■□□□ 1.63
PTPN13-205ENST00000502971 hCG_1984214I3L0E3 225 aa25.21■■□□□ 1.63
PTPN13-205ENST00000502971 SLURP2P0DP57 97 aa25.21■■□□□ 1.63
PTPN13-205ENST00000502971 PTPREP23469 700 aa25.21■■□□□ 1.63
PTPN13-205ENST00000502971 CCDC173Q0VFZ6 552 aa25.21■■□□□ 1.63
PTPN13-205ENST00000502971 SHC4Q6S5L8 630 aa25.21■■□□□ 1.63
PTPN13-205ENST00000502971 ZNF713Q8N859 430 aaPredicted RBP25.21■■□□□ 1.63
PTPN13-205ENST00000502971 FAM205CA6NFA0 338 aa25.2■■□□□ 1.63
PTPN13-205ENST00000502971 ZNF543Q08ER8 600 aa25.2■■□□□ 1.63
PTPN13-205ENST00000502971 GPATCH4Q5T3I0 446 aaKnown RBP25.2■■□□□ 1.63
PTPN13-205ENST00000502971 ZNF579Q8NAF0 562 aaKnown RBP25.2■■□□□ 1.63
PTPN13-205ENST00000502971 ZBED3Q96IU2 234 aaPredicted RBP25.2■■□□□ 1.63
PTPN13-205ENST00000502971 FBXO2Q9UK22 296 aaPredicted RBP25.2■■□□□ 1.63
PTPN13-205ENST00000502971 HPSEQ9Y251 543 aa25.2■■□□□ 1.63
PTPN13-205ENST00000502971 FRMPD2Q68DX3 1309 aaPredicted RBP25.2■■□□□ 1.62
PTPN13-205ENST00000502971 CLRN2A0PK11 232 aa25.2■■□□□ 1.62
PTPN13-205ENST00000502971 FZD9O00144 591 aa25.2■■□□□ 1.62
PTPN13-205ENST00000502971 MYO1BO43795 1136 aa25.2■■□□□ 1.62
PTPN13-205ENST00000502971 ZNF202O95125 648 aa25.2■■□□□ 1.62
PTPN13-205ENST00000502971 ABCB5Q2M3G0 1257 aa25.2■■□□□ 1.62
PTPN13-205ENST00000502971 TIGD1Q96MW7 591 aa25.2■■□□□ 1.62
PTPN13-205ENST00000502971 SRPRBQ9Y5M8 271 aaKnown RBP25.2■■□□□ 1.62
PTPN13-205ENST00000502971 GRIN3BO60391 1043 aa25.19■■□□□ 1.62
PTPN13-205ENST00000502971 ATP2B1P20020 1258 aa25.19■■□□□ 1.62
PTPN13-205ENST00000502971 RPS12P25398 132 aaKnown RBP25.19■■□□□ 1.62
PTPN13-205ENST00000502971 ATP2B2Q01814 1243 aa25.19■■□□□ 1.62
PTPN13-205ENST00000502971 TTC38Q5R3I4 469 aa25.19■■□□□ 1.62
PTPN13-205ENST00000502971 TYW1BQ6NUM6 668 aa25.19■■□□□ 1.62
PTPN13-205ENST00000502971 PPP1R9BQ96SB3 815 aa25.19■■□□□ 1.62
PTPN13-205ENST00000502971 CPVLQ9H3G5 476 aa25.19■■□□□ 1.62
PTPN13-205ENST00000502971 MRVI1Q9Y6F6 885 aa25.19■■□□□ 1.62
PTPN13-205ENST00000502971 MYH4Q9Y623 1939 aa25.18■■□□□ 1.62
PTPN13-205ENST00000502971 M0R2N6 131 aa25.18■■□□□ 1.62
PTPN13-205ENST00000502971 EEF2P13639 858 aaKnown RBP25.18■■□□□ 1.62
PTPN13-205ENST00000502971 SYKP43405 635 aa25.18■■□□□ 1.62
PTPN13-205ENST00000502971 PRELPP51888 382 aa25.18■■□□□ 1.62
PTPN13-205ENST00000502971 RBM26Q5T8P6 1007 aaKnown RBP25.18■■□□□ 1.62
PTPN13-205ENST00000502971 PIK3AP1Q6ZUJ8 805 aa25.18■■□□□ 1.62
PTPN13-205ENST00000502971 FAM83AQ86UY5 434 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms