RNA–Protein interactions for RNA: ENST00000502865.5

SFXN1-204, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 641 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-204ENST00000502865 KLRF2D3W0D1 207 aa11.31□□□□□ -0.6
SFXN1-204ENST00000502865 F5H6K3 240 aa11.31□□□□□ -0.6
SFXN1-204ENST00000502865 NDUFB10O96000 172 aa11.31□□□□□ -0.6
SFXN1-204ENST00000502865 F13A1P00488 732 aa11.31□□□□□ -0.6
SFXN1-204ENST00000502865 ASNSP08243 561 aa11.31□□□□□ -0.6
SFXN1-204ENST00000502865 FMR1Q06787 632 aaKnown RBP eCLIP11.31□□□□□ -0.6
SFXN1-204ENST00000502865 KLRC3Q07444 240 aa11.31□□□□□ -0.6
SFXN1-204ENST00000502865 ZNF543Q08ER8 600 aa11.31□□□□□ -0.6
SFXN1-204ENST00000502865 MAP1SQ66K74 1059 aaPredicted RBP11.31□□□□□ -0.6
SFXN1-204ENST00000502865 PIBF1Q8WXW3 757 aa11.31□□□□□ -0.6
SFXN1-204ENST00000502865 HOOK2Q96ED9 719 aa11.31□□□□□ -0.6
SFXN1-204ENST00000502865 WRNIP1Q96S55 665 aa11.31□□□□□ -0.6
SFXN1-204ENST00000502865 RNF26Q9BY78 433 aaPredicted RBP11.31□□□□□ -0.6
SFXN1-204ENST00000502865 CLEC11AQ9Y240 323 aa11.31□□□□□ -0.6
SFXN1-204ENST00000502865 TMX2Q9Y320 296 aa11.31□□□□□ -0.6
SFXN1-204ENST00000502865 PAPPA2Q9BXP8 1791 aa11.31□□□□□ -0.6
SFXN1-204ENST00000502865 PHIPQ8WWQ0 1821 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 RAD21O60216 631 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 DEXIO95424 95 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 GNAQP50148 359 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 RESTQ13127 1097 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 ASPRV1Q53RT3 343 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 MOB2Q70IA6 237 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 KCTD1Q719H9 257 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 FERMT3Q86UX7 667 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 TRIM22Q8IYM9 498 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 SCYL3Q8IZE3 742 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 GMCL1P1Q8NEA9 526 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 FBXO18Q8NFZ0 1043 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.3□□□□□ -0.6
SFXN1-204ENST00000502865 DCAF4Q8WV16 495 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 C8orf76Q96K31 380 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 NUP88Q99567 741 aaPredicted RBP11.3□□□□□ -0.6
SFXN1-204ENST00000502865 LZTS2Q9BRK4 669 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 ARHGEF10LQ9HCE6 1279 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 VAT1LQ9HCJ6 419 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 NMRK2Q9NPI5 230 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 GINM1Q9NU53 330 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 OTOFQ9HC10 1997 aa11.3□□□□□ -0.6
SFXN1-204ENST00000502865 H3BQV1 296 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 TRAF5O00463 557 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 PTPRAP18433 802 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 SMARCA1P28370 1054 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 SLC16A2P36021 539 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 DGKZQ13574 1117 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 ZYXQ15942 572 aaKnown RBP11.29□□□□□ -0.6
SFXN1-204ENST00000502865 PFKFB3Q16875 520 aaPredicted RBP11.29□□□□□ -0.6
SFXN1-204ENST00000502865 CCDC96Q2M329 555 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 FOXD4L6Q3SYB3 417 aaPredicted RBP11.29□□□□□ -0.6
SFXN1-204ENST00000502865 KRT40Q6A162 431 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 FAM173BQ6P4H8 233 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 FOXD4L3Q6VB84 417 aaPredicted RBP11.29□□□□□ -0.6
SFXN1-204ENST00000502865 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.29□□□□□ -0.6
SFXN1-204ENST00000502865 SPICE1Q8N0Z3 855 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 ZNF526Q8TF50 670 aaPredicted RBP11.29□□□□□ -0.6
SFXN1-204ENST00000502865 SPZ1Q9BXG8 430 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 RIOX1Q9H6W3 641 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 VCPKMTQ9H867 229 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 SYNPO2Q9UMS6 1093 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 KCNJ14Q9UNX9 436 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 KIF3AQ9Y496 699 aa11.29□□□□□ -0.6
SFXN1-204ENST00000502865 KIF28PB7ZC32 967 aa11.28□□□□□ -0.6
SFXN1-204ENST00000502865 BAG4O95429 457 aaKnown RBP11.28□□□□□ -0.6
SFXN1-204ENST00000502865 BMP3P12645 472 aa11.28□□□□□ -0.6
SFXN1-204ENST00000502865 PDIA4P13667 645 aaKnown RBP11.28□□□□□ -0.6
SFXN1-204ENST00000502865 SLC1A4P43007 532 aa11.28□□□□□ -0.6
SFXN1-204ENST00000502865 MAP3K9P80192 1104 aa11.28□□□□□ -0.6
SFXN1-204ENST00000502865 AKAP17AQ02040 695 aaKnown RBP11.28□□□□□ -0.6
SFXN1-204ENST00000502865 NOL9Q5SY16 702 aaKnown RBP11.28□□□□□ -0.6
SFXN1-204ENST00000502865 CLEC17AQ6ZS10 378 aa11.28□□□□□ -0.6
SFXN1-204ENST00000502865 ADGRF4Q8IZF3 695 aa11.28□□□□□ -0.6
SFXN1-204ENST00000502865 WASF1Q92558 559 aa11.28□□□□□ -0.6
SFXN1-204ENST00000502865 GMCL1Q96IK5 515 aa11.28□□□□□ -0.6
SFXN1-204ENST00000502865 PIGSQ96S52 555 aa11.28□□□□□ -0.6
SFXN1-204ENST00000502865 JMJD4Q9H9V9 463 aa11.28□□□□□ -0.6
SFXN1-204ENST00000502865 VPS54Q9P1Q0 977 aa11.28□□□□□ -0.6
SFXN1-204ENST00000502865 SNCAIPQ9Y6H5 919 aa11.28□□□□□ -0.6
SFXN1-204ENST00000502865 TCHHQ07283 1943 aa11.27□□□□□ -0.6
SFXN1-204ENST00000502865 USP17L10C9JJH3 530 aa11.27□□□□□ -0.61
SFXN1-204ENST00000502865 ADAMTS3O15072 1205 aa11.27□□□□□ -0.61
SFXN1-204ENST00000502865 SCG2P13521 617 aa11.27□□□□□ -0.61
SFXN1-204ENST00000502865 SPP2Q13103 211 aa11.27□□□□□ -0.61
SFXN1-204ENST00000502865 VGLL4Q14135 290 aa11.27□□□□□ -0.61
SFXN1-204ENST00000502865 NFKBIBQ15653 356 aa11.27□□□□□ -0.61
SFXN1-204ENST00000502865 GPATCH4Q5T3I0 446 aaKnown RBP11.27□□□□□ -0.61
SFXN1-204ENST00000502865 TYW1BQ6NUM6 668 aa11.27□□□□□ -0.61
SFXN1-204ENST00000502865 RGS22Q8NE09 1264 aa11.27□□□□□ -0.61
SFXN1-204ENST00000502865 GPKOWQ92917 476 aaPredicted RBP eCLIP11.27□□□□□ -0.61
SFXN1-204ENST00000502865 WDR18Q9BV38 432 aa11.27□□□□□ -0.61
SFXN1-204ENST00000502865 GOPCQ9HD26 462 aa11.27□□□□□ -0.61
SFXN1-204ENST00000502865 EMILIN3Q9NT22 766 aa11.27□□□□□ -0.61
SFXN1-204ENST00000502865 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.27□□□□□ -0.61
SFXN1-204ENST00000502865 MYH15Q9Y2K3 1946 aa11.27□□□□□ -0.61
SFXN1-204ENST00000502865 TMEM232C9JQI7 657 aa11.26□□□□□ -0.61
SFXN1-204ENST00000502865 PPP1R12BO60237 982 aaPredicted RBP11.26□□□□□ -0.61
SFXN1-204ENST00000502865 MMP1P03956 469 aa11.26□□□□□ -0.61
SFXN1-204ENST00000502865 MCM4P33991 863 aa11.26□□□□□ -0.61
SFXN1-204ENST00000502865 SNAP25P60880 206 aa11.26□□□□□ -0.61
SFXN1-204ENST00000502865 KIF23Q02241 960 aaPredicted RBP11.26□□□□□ -0.61
SFXN1-204ENST00000502865 FAM83BQ5T0W9 1011 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms