RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 ZNF408Q9H9D4 720 aa4.41□□□□□ -1.7
CDC42SE2-205ENST00000502840 BRMS1Q9HCU9 246 aa4.41□□□□□ -1.7
CDC42SE2-205ENST00000502840 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.41□□□□□ -1.7
CDC42SE2-205ENST00000502840 ZNRF3Q9ULT6 936 aa4.41□□□□□ -1.7
CDC42SE2-205ENST00000502840 TNIKQ9UKE5 1360 aa4.4□□□□□ -1.7
CDC42SE2-205ENST00000502840 MEIS3P2A8K0S8 358 aa4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 KLF4O43474 513 aa4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 LRRN2O75325 713 aa4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 TPP2P29144 1249 aaPredicted RBP4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 ETFBP38117 255 aa4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 GIPRP48546 466 aa4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 KCNMB1Q16558 191 aa4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 CWF19L2Q2TBE0 894 aaKnown RBP4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 VPS37DQ86XT2 251 aa4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 REXO1Q8N1G1 1221 aaKnown RBP4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 VWCEQ96DN2 955 aa4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 KREMEN1Q96MU8 473 aa4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 DNAJC2Q99543 621 aaKnown RBP4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 ASPNQ9BXN1 380 aa4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 TRIT1Q9H3H1 467 aaKnown RBP4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 PCDHB14Q9Y5E9 798 aa4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 RUSC2Q8N2Y8 1516 aa4.4□□□□□ -1.71
CDC42SE2-205ENST00000502840 CEP162Q5TB80 1403 aa4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 DNAJC25-GNG10A0A024R161 153 aa4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 SLC22A31A6NKX4 558 aa4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 AFMP43652 599 aa4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 RALGPS1Q5JS13 557 aa4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 ZNF648Q5T619 568 aaPredicted RBP4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 CCDC81Q6ZN84 652 aa4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 TSPYL5Q86VY4 417 aaPredicted RBP4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 PHACTR4Q8IZ21 702 aa4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 RBBP8NLQ8NC74 664 aaPredicted RBP4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 NKD1Q969G9 470 aa4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 KIRREL1Q96J84 757 aa4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 KIF2CQ99661 725 aa4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 LNPKQ9C0E8 428 aa4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 SLAMF8Q9P0V8 285 aa4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 KCNH3Q9ULD8 1083 aa4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 STRIP2Q9ULQ0 834 aa4.39□□□□□ -1.71
CDC42SE2-205ENST00000502840 SHISA3A0PJX4 238 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 RGS13O14921 159 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 UBOX5O94941 541 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 GLI1P08151 1106 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 ATP2B1P20020 1258 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 MESP2Q0VG99 397 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 ARSHQ5FYA8 562 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 OVOS1Q6IE37 1185 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 SPOCD1Q6ZMY3 1216 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 LSRQ86X29 649 aaPredicted RBP4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 CREG2Q8IUH2 290 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 CCDC120Q96HB5 630 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 PIF1Q9H611 641 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 ANTXR1Q9H6X2 564 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 GPATCH2Q9NW75 528 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 GMIPQ9P107 970 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 DUSP13Q9UII6 198 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 TMEM59LQ9UK28 342 aa4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 WRNQ14191 1432 aaPredicted RBP eCLIP4.38□□□□□ -1.71
CDC42SE2-205ENST00000502840 TOP2AP11388 1531 aaKnown RBP4.37□□□□□ -1.71
CDC42SE2-205ENST00000502840 FARP2O94887 1054 aaPredicted RBP4.37□□□□□ -1.71
CDC42SE2-205ENST00000502840 GBP1P32455 592 aa4.37□□□□□ -1.71
CDC42SE2-205ENST00000502840 GTF2F1P35269 517 aaKnown RBP eCLIP4.37□□□□□ -1.716e-7■■■■■ 32.9
CDC42SE2-205ENST00000502840 MLECQ14165 292 aa4.37□□□□□ -1.71
CDC42SE2-205ENST00000502840 CDCP2Q5VXM1 449 aa4.37□□□□□ -1.71
CDC42SE2-205ENST00000502840 DPH6Q7L8W6 267 aa4.37□□□□□ -1.71
CDC42SE2-205ENST00000502840 TTC6Q86TZ1 520 aa4.37□□□□□ -1.71
CDC42SE2-205ENST00000502840 LIN37Q96GY3 246 aaPredicted RBP4.37□□□□□ -1.71
CDC42SE2-205ENST00000502840 SRRTQ9BXP5 876 aaKnown RBP4.37□□□□□ -1.71
CDC42SE2-205ENST00000502840 MRVI1Q9Y6F6 885 aa4.37□□□□□ -1.71
CDC42SE2-205ENST00000502840 LRRC10BA6NIK2 292 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 HPXP02790 462 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 ZGLP1P0C6A0 271 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 ACRP10323 421 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 RAG1P15918 1043 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 POLR2BP30876 1174 aaKnown RBP4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 MCM4P33991 863 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 ZNF165P49910 485 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 ERVFC1P60507 584 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 EGR3Q06889 387 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 MLANAQ16655 118 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 GK5Q6ZS86 529 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 CELF2-AS1Q8N7Q2 184 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 HNRNPLLQ8WVV9 542 aaKnown RBP4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 ATG4CQ96DT6 458 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 HDAC8Q9BY41 377 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 ADAMTS10Q9H324 1103 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 CNNM2Q9H8M5 875 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 SP110Q9HB58 689 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 FAM53CQ9NYF3 392 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 PPP1R1BQ9UD71 204 aaPredicted RBP4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 PRKAG3Q9UGI9 489 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 MSRB2Q9Y3D2 182 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 PCDHA11Q9Y5I1 949 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 EEA1Q15075 1411 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 GOLGA3Q08378 1498 aa4.36□□□□□ -1.71
CDC42SE2-205ENST00000502840 SMARCA4P51532 1647 aa4.35□□□□□ -1.71
CDC42SE2-205ENST00000502840 TNFRSF10CO14798 259 aa4.35□□□□□ -1.71
CDC42SE2-205ENST00000502840 SMAD7O15105 426 aaKnown RBP4.35□□□□□ -1.71
CDC42SE2-205ENST00000502840 SSBP05455 408 aaKnown RBP eCLIP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms