RNA–Protein interactions for RNA: ENST00000502495.1

SCLT1-203, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 1,811 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-203ENST00000502495 XAGE3Q8WTP9 111 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 HNRNPLLQ8WVV9 542 aaKnown RBP4.3□□□□□ -1.72
SCLT1-203ENST00000502495 GATA6Q92908 595 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 ATG4CQ96DT6 458 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 SEMA6CQ9H3T2 930 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 FGD5Q6ZNL6 1462 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 FAM86C2PA6NEL3 165 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 NME1P15531 152 aaKnown RBP4.3□□□□□ -1.72
SCLT1-203ENST00000502495 SLBPQ14493 270 aaKnown RBP eCLIP4.3□□□□□ -1.72
SCLT1-203ENST00000502495 SOGA3Q5TF21 947 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 PRAMEF13Q5VWM6 474 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 NLRC3Q7RTR2 1065 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 SPRED2Q7Z698 418 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 C1QL4Q86Z23 238 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 MRPL41Q8IXM3 137 aaKnown RBP4.3□□□□□ -1.72
SCLT1-203ENST00000502495 PI4K2BQ8TCG2 481 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 TM9SF2Q99805 663 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 TRIM55Q9BYV6 548 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 ACTR10Q9NZ32 417 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 LMCD1Q9NZU5 365 aa4.3□□□□□ -1.72
SCLT1-203ENST00000502495 SOGA1O94964 1423 aa4.29□□□□□ -1.72
SCLT1-203ENST00000502495 KIF27Q86VH2 1401 aa4.29□□□□□ -1.72
SCLT1-203ENST00000502495 POLA1P09884 1462 aaPredicted RBP4.29□□□□□ -1.72
SCLT1-203ENST00000502495 LRIG2O94898 1065 aa4.29□□□□□ -1.72
SCLT1-203ENST00000502495 RNASE1P07998 156 aaKnown RBP4.29□□□□□ -1.72
SCLT1-203ENST00000502495 GUCY2CP25092 1073 aa4.29□□□□□ -1.72
SCLT1-203ENST00000502495 CDCP2Q5VXM1 449 aa4.29□□□□□ -1.72
SCLT1-203ENST00000502495 GIMAP6Q6P9H5 292 aa4.29□□□□□ -1.72
SCLT1-203ENST00000502495 ZNF765Q7L2R6 523 aa4.29□□□□□ -1.72
SCLT1-203ENST00000502495 DHX37Q8IY37 1157 aaKnown RBP4.29□□□□□ -1.72
SCLT1-203ENST00000502495 SLFN12Q8IYM2 578 aa4.29□□□□□ -1.72
SCLT1-203ENST00000502495 FOXQ1Q9C009 403 aa4.29□□□□□ -1.72
SCLT1-203ENST00000502495 LNPKQ9C0E8 428 aa4.29□□□□□ -1.72
SCLT1-203ENST00000502495 CNNM2Q9H8M5 875 aa4.29□□□□□ -1.72
SCLT1-203ENST00000502495 ABCA10Q8WWZ4 1543 aa4.29□□□□□ -1.72
SCLT1-203ENST00000502495 U2SURPO15042 1029 aaKnown RBP4.28□□□□□ -1.72
SCLT1-203ENST00000502495 DYNC1LI2O43237 492 aaPredicted RBP4.28□□□□□ -1.72
SCLT1-203ENST00000502495 CST3P01034 146 aaPredicted RBP4.28□□□□□ -1.72
SCLT1-203ENST00000502495 POLR2BP30876 1174 aaKnown RBP4.28□□□□□ -1.72
SCLT1-203ENST00000502495 GBP1P32455 592 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 LARP1BQ659C4 914 aaKnown RBP4.28□□□□□ -1.72
SCLT1-203ENST00000502495 ARMCX6Q7L4S7 300 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 DPH6Q7L8W6 267 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 TTC6Q86TZ1 520 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 SLC9A7Q96T83 725 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 KIF2CQ99661 725 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 TNKS2Q9H2K2 1166 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 MBNL3Q9NUK0 354 aaKnown RBP4.28□□□□□ -1.72
SCLT1-203ENST00000502495 JAG2Q9Y219 1238 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 THOC2Q8NI27 1593 aaKnown RBP4.28□□□□□ -1.72
SCLT1-203ENST00000502495 A0A1W2PQH9 124 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 TNFRSF10CO14798 259 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 KLF4O43474 513 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 ACRP10323 421 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 CAP2P40123 477 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 CASP7P55210 303 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 CHMP4BP1P59074 171 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 BNIP3Q12983 259 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 RAB33AQ14088 237 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 MLANAQ16655 118 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 NBPF6Q5VWK0 638 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 INTS3Q68E01 1043 aaKnown RBP4.28□□□□□ -1.72
SCLT1-203ENST00000502495 UNC5AQ6ZN44 842 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 WFDC3Q8IUB2 231 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 MFSD2AQ8NA29 543 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 BAHD1Q8TBE0 780 aaPredicted RBP4.28□□□□□ -1.72
SCLT1-203ENST00000502495 CCDC74BQ96LY2 380 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 NBPF4Q96M43 638 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 IFT140Q96RY7 1462 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 MIPEPQ99797 713 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 SLC12A7Q9Y666 1083 aa4.28□□□□□ -1.72
SCLT1-203ENST00000502495 WDR97A6NE52 1622 aa4.27□□□□□ -1.73
SCLT1-203ENST00000502495 CDK5R2Q13319 367 aa4.27□□□□□ -1.73
SCLT1-203ENST00000502495 ZYXQ15942 572 aaKnown RBP4.27□□□□□ -1.73
SCLT1-203ENST00000502495 CCDC144BQ3MJ40 725 aa4.27□□□□□ -1.73
SCLT1-203ENST00000502495 CYP27C1Q4G0S4 372 aa4.27□□□□□ -1.73
SCLT1-203ENST00000502495 TAB3Q8N5C8 712 aaPredicted RBP4.27□□□□□ -1.73
SCLT1-203ENST00000502495 C19orf47Q8N9M1 422 aaKnown RBP4.27□□□□□ -1.73
SCLT1-203ENST00000502495 LRRN4CLQ8ND94 238 aa4.27□□□□□ -1.73
SCLT1-203ENST00000502495 CYB5D2Q8WUJ1 264 aa4.27□□□□□ -1.73
SCLT1-203ENST00000502495 OSBPL2Q9H1P3 480 aa4.27□□□□□ -1.73
SCLT1-203ENST00000502495 ST7Q9NRC1 585 aa4.27□□□□□ -1.73
SCLT1-203ENST00000502495 VAV3Q9UKW4 847 aa4.27□□□□□ -1.73
SCLT1-203ENST00000502495 CUX2O14529 1486 aa4.26□□□□□ -1.73
SCLT1-203ENST00000502495 RGS13O14921 159 aa4.26□□□□□ -1.73
SCLT1-203ENST00000502495 FXNQ16595 210 aa4.26□□□□□ -1.73
SCLT1-203ENST00000502495 OGFOD3Q6PK18 319 aa4.26□□□□□ -1.73
SCLT1-203ENST00000502495 SEZ6L2Q6UXD5 910 aa4.26□□□□□ -1.73
SCLT1-203ENST00000502495 ZSWIM9Q86XI8 627 aa4.26□□□□□ -1.73
SCLT1-203ENST00000502495 CELF2-AS1Q8N7Q2 184 aa4.26□□□□□ -1.73
SCLT1-203ENST00000502495 ZSWIM4Q9H7M6 989 aa4.26□□□□□ -1.73
SCLT1-203ENST00000502495 PRDM10Q9NQV6 1147 aa4.26□□□□□ -1.73
SCLT1-203ENST00000502495 RAD54L2Q9Y4B4 1467 aa4.26□□□□□ -1.73
SCLT1-203ENST00000502495 LTBP3Q9NS15 1303 aa4.26□□□□□ -1.73
SCLT1-203ENST00000502495 CCDC85CA6NKD9 419 aa4.25□□□□□ -1.73
SCLT1-203ENST00000502495 DDAH1O94760 285 aa4.25□□□□□ -1.73
SCLT1-203ENST00000502495 UBOX5O94941 541 aa4.25□□□□□ -1.73
SCLT1-203ENST00000502495 CD8BP10966 210 aa4.25□□□□□ -1.73
SCLT1-203ENST00000502495 CCNFP41002 786 aa4.25□□□□□ -1.73
SCLT1-203ENST00000502495 CTSWP56202 376 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms