RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 TRIM64BA6NI03 449 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 TOR1BO14657 336 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 ARAFP10398 606 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 SLC20A2Q08357 652 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 GBX1Q14549 363 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 IFIT1BQ5T764 474 aaKnown RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 ITPRIPL1Q6GPH6 555 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 CCDC149Q6ZUS6 474 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 GALNT12Q8IXK2 581 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 FUBP3Q96I24 572 aaKnown RBP eCLIP4.38□□□□□ -1.71
SUB1-202ENST00000502453 CAMKK2Q96RR4 588 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 OSBPL3Q9H4L5 887 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 SUV39H2Q9H5I1 410 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 A0A1W2PQH9 124 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 FAM170AA1A519 330 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 K7ENM7 598 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 M0R3H8 397 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 CTNND1O60716 968 aaKnown RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 GJA9P57773 515 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 INHBEP58166 350 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 APBA1Q02410 837 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 RTN1Q16799 776 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 CTC1Q2NKJ3 1217 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 C4orf48Q5BLP8 95 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 DACT2Q5SW24 774 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 PTCRAQ6ISU1 281 aaPredicted RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 FCHSD1Q86WN1 690 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 TEX11Q8IYF3 940 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 KCT2Q8NC54 265 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 ZMAT2Q96NC0 199 aaKnown RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 ELP3Q9H9T3 547 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 PSDA5PKW4 1024 aaPredicted RBP4.37□□□□□ -1.71
SUB1-202ENST00000502453 TRIM64CA6NLI5 447 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 PRKD3O94806 890 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 CYP2C19P33261 490 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 GRB10Q13322 594 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 ZNF267Q14586 743 aaPredicted RBP4.37□□□□□ -1.71
SUB1-202ENST00000502453 BTN2A1Q7KYR7 527 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 CPA6Q8N4T0 437 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 KCTD15Q96SI1 283 aaPredicted RBP4.37□□□□□ -1.71
SUB1-202ENST00000502453 IFT22Q9H7X7 185 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 VTA1Q9NP79 307 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 TMPRSS4Q9NRS4 437 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 ZNRF3Q9ULT6 936 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 FAM155AB1AL88 458 aaPredicted RBP4.37□□□□□ -1.71
SUB1-202ENST00000502453 RFPL3O75679 317 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 ZKSCAN1P17029 563 aaPredicted RBP4.37□□□□□ -1.71
SUB1-202ENST00000502453 CAPN3P20807 821 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 CENPCQ03188 943 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 ODF1Q14990 250 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 TLR1Q15399 786 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 SWSAP1Q6NVH7 229 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 AHI1Q8N157 1196 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 SEC62Q99442 399 aaKnown RBP4.37□□□□□ -1.71
SUB1-202ENST00000502453 ODF2LQ9ULJ1 636 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 LRCH1Q9Y2L9 728 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 PCDHB5Q9Y5E4 795 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 FAM83GA6ND36 823 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 UBAP1LF5GYI3 381 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 DNAJC8O75937 253 aaPredicted RBP4.37□□□□□ -1.71
SUB1-202ENST00000502453 LTFP02788 710 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 HOXC13P31276 330 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 RAD52P43351 418 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 RXRGP48443 463 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 ANO4Q32M45 955 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 SV2CQ496J9 727 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 RC3H1Q5TC82 1133 aaKnown RBP4.37□□□□□ -1.71
SUB1-202ENST00000502453 LHX8Q68G74 356 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 KIAA1211LQ6NV74 962 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 IGF2-ASQ6U949 168 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 OR6P1Q8NGX9 317 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 L3MBTL2Q969R5 705 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 SH3KBP1Q96B97 665 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 FAM163AQ96GL9 167 aaPredicted RBP4.37□□□□□ -1.71
SUB1-202ENST00000502453 KCNQ5Q9NR82 932 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 HELLSQ9NRZ9 838 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 LRP2BPQ9P2M1 347 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 CRYL1Q9Y2S2 319 aa4.37□□□□□ -1.71
SUB1-202ENST00000502453 LRRFIP2Q9Y608 721 aaKnown RBP4.37□□□□□ -1.71
SUB1-202ENST00000502453 EML1O00423 815 aa4.36□□□□□ -1.71
SUB1-202ENST00000502453 HRO43593 1189 aa4.36□□□□□ -1.71
SUB1-202ENST00000502453 TLL1O43897 1013 aa4.36□□□□□ -1.71
SUB1-202ENST00000502453 SMARCA1P28370 1054 aa4.36□□□□□ -1.71
SUB1-202ENST00000502453 CTNNA1P35221 906 aaKnown RBP4.36□□□□□ -1.71
SUB1-202ENST00000502453 ATP6V1E1P36543 226 aa4.36□□□□□ -1.71
SUB1-202ENST00000502453 IL2P60568 153 aa4.36□□□□□ -1.71
SUB1-202ENST00000502453 FOXK2Q01167 660 aa4.36□□□□□ -1.71
SUB1-202ENST00000502453 SART3Q15020 963 aaKnown RBP4.36□□□□□ -1.71
SUB1-202ENST00000502453 CFAP100Q494V2 611 aa4.36□□□□□ -1.71
SUB1-202ENST00000502453 FNDC3BQ53EP0 1204 aaKnown RBP4.36□□□□□ -1.71
SUB1-202ENST00000502453 TTLL5Q6EMB2 1281 aa4.36□□□□□ -1.71
SUB1-202ENST00000502453 HSPBAP1Q96EW2 488 aa4.36□□□□□ -1.71
SUB1-202ENST00000502453 TBATAQ96M53 351 aa4.36□□□□□ -1.71
SUB1-202ENST00000502453 BRD9Q9H8M2 597 aa4.36□□□□□ -1.71
SUB1-202ENST00000502453 ZCCHC17Q9NP64 241 aaKnown RBP4.36□□□□□ -1.71
SUB1-202ENST00000502453 PNMA8BQ9ULN7 279 aaPredicted RBP4.36□□□□□ -1.71
SUB1-202ENST00000502453 JAG2Q9Y219 1238 aa4.36□□□□□ -1.71
SUB1-202ENST00000502453 GPR52Q9Y2T5 361 aa4.36□□□□□ -1.71
SUB1-202ENST00000502453 ZCCHC6Q5VYS8 1495 aaKnown RBP4.36□□□□□ -1.71
SUB1-202ENST00000502453 TRBV23-1A0A0A0MS06 115 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms