RNA–Protein interactions for RNA: ENST00000502448.5

NFXL1-204, Transcript of nuclear transcription factor, X-box binding like 1, human

TSL 1 (best)

Gene NFXL1, Length 1,760 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFXL1-204	ENST00000502448	ECE1	P42892	770 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	GTF2A2	P52657	109 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	BIRC3	Q13489	604 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	CDC37	Q16543	378 aa	Predicted RBP	6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	HIF1A	Q16665	826 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	PEAR1	Q5VY43	1037 aa	Predicted RBP	6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	CFAP161	Q6P656	301 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	C16orf54	Q6UWD8	224 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	TPTE2	Q6XPS3	522 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	RASSF3	Q86WH2	238 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	CLASRP	Q8N2M8	674 aa	Known RBP	6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	DHRS4	Q9BTZ2	278 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	MENT	Q9BUN1	341 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	SLC13A1	Q9BZW2	595 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	RETREG1	Q9H6L5	497 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	CNNM2	Q9H8M5	875 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	NUB1	Q9Y5A7	615 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	FMN1	Q68DA7	1419 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	TEX14	Q8IWB6	1497 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448	MAGI3	Q5TCQ9	1506 aa		6.25	□□□□□ -1.41
NFXL1-204	ENST00000502448		A0A1W2PRQ8	180 aa		6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	UBAP1L	F5GYI3	381 aa		6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448		K7ESF4	209 aa		6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	APBA3	O96018	575 aa		6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	RPN1	P04843	607 aa	Known RBP	6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	CCT5	P48643	541 aa		6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	NCAPH	Q15003	741 aa		6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	TOMM20	Q15388	145 aa		6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	ELF2	Q15723	593 aa		6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	FAM133B	Q5BKY9	247 aa	Known RBP	6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	XRRA1	Q6P2D8	792 aa		6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	RUFY4	Q6ZNE9	571 aa		6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	GK5	Q6ZS86	529 aa		6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	C1orf127	Q8N9H9	656 aa		6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	COG1	Q8WTW3	980 aa		6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	C7orf43	Q8WVR3	580 aa		6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	FHDC1	Q9C0D6	1143 aa	Predicted RBP	6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
NFXL1-204	ENST00000502448	hCG_1984214	I3L0E3	225 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	PMM2	O15305	246 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	ORC4	O43929	436 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	SUSD5	O60279	629 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	DNAJC8	O75937	253 aa	Predicted RBP	6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	ATE1	O95260	518 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	LPO	P22079	712 aa	Predicted RBP	6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	RXRG	P48443	463 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	SH3BP2	P78314	561 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	GTF2H3	Q13889	308 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	SEPT7	Q16181	437 aa	Known RBP	6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	TMEM240	Q5SV17	173 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	NBPF10	Q6P3W6	841 aa	Known RBP	6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	C1orf228	Q6PIY5	440 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	VASH1	Q7L8A9	365 aa	Predicted RBP	6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	CBARP	Q8N350	705 aa	Predicted RBP	6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	CNKSR1	Q969H4	720 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	PMEPA1	Q969W9	287 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	PGBD4	Q96DM1	585 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	DCAF5	Q96JK2	942 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	TBATA	Q96M53	351 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	TM9SF2	Q99805	663 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	MAN1C1	Q9NR34	630 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	CABP1	Q9NZU7	370 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	DMTF1	Q9Y222	760 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	MEIS3P2	A8K0S8	358 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	FIBP	O43427	364 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	SETSIP	P0DME0	302 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	BPI	P17213	487 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	INPP5B	P32019	993 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	BAG6	P46379	1132 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	IDH3A	P50213	366 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	KRT76	Q01546	638 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	DHX9	Q08211	1270 aa	Known RBP	6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	TRIM61	Q5EBN2	209 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	CEP162	Q5TB80	1403 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	DTHD1	Q6ZMT9	781 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	FCHSD1	Q86WN1	690 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	TAB3	Q8N5C8	712 aa	Predicted RBP	6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	ARID1B	Q8NFD5	2236 aa	Predicted RBP	6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	NECAB3	Q96P71	396 aa	Predicted RBP	6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	ZFYVE1	Q9HBF4	777 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	LRRC4B	Q9NT99	713 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	RCAN3	Q9UKA8	241 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	SETD1B	Q9UPS6	1966 aa	Known RBP	6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	ANKRD6	Q9Y2G4	727 aa		6.23	□□□□□ -1.41
NFXL1-204	ENST00000502448	CBFA2T2	O43439	604 aa		6.22	□□□□□ -1.41
NFXL1-204	ENST00000502448	ARHGEF15	O94989	841 aa		6.22	□□□□□ -1.41
NFXL1-204	ENST00000502448	CT47B1	P0C2W7	299 aa	Predicted RBP	6.22	□□□□□ -1.41
NFXL1-204	ENST00000502448	TGFB3	P10600	412 aa		6.22	□□□□□ -1.41
NFXL1-204	ENST00000502448	LMNB1	P20700	586 aa		6.22	□□□□□ -1.41
NFXL1-204	ENST00000502448	GUCY2C	P25092	1073 aa		6.22	□□□□□ -1.41
NFXL1-204	ENST00000502448	ARSD	P51689	593 aa		6.22	□□□□□ -1.41
NFXL1-204	ENST00000502448	TMPRSS15	P98073	1019 aa		6.22	□□□□□ -1.41
NFXL1-204	ENST00000502448	PCBP1	Q15365	356 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
NFXL1-204	ENST00000502448	ILDR2	Q71H61	639 aa		6.22	□□□□□ -1.41
NFXL1-204	ENST00000502448	CLIP3	Q96DZ5	547 aa		6.22	□□□□□ -1.41
NFXL1-204	ENST00000502448	AIFM3	Q96NN9	605 aa		6.22	□□□□□ -1.41
NFXL1-204	ENST00000502448	TTC1	Q99614	292 aa		6.22	□□□□□ -1.41
NFXL1-204	ENST00000502448	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
NFXL1-204	ENST00000502448	MTFR1L	Q9H019	292 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms