RNA–Protein interactions for RNA: ENST00000502448.5

NFXL1-204, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 1,760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-204ENST00000502448 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
NFXL1-204ENST00000502448 CHIC1Q5VXU3 224 aa19.22■□□□□ 0.67
NFXL1-204ENST00000502448 POTEDQ86YR6 584 aa18.52■□□□□ 0.55
NFXL1-204ENST00000502448 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
NFXL1-204ENST00000502448 PHF23Q9BUL5 403 aaPredicted RBP17.36■□□□□ 0.37
NFXL1-204ENST00000502448 FOXD1Q16676 465 aa16.79■□□□□ 0.28
NFXL1-204ENST00000502448 MSH5O43196 834 aa16.31■□□□□ 0.2
NFXL1-204ENST00000502448 PIAS4Q8N2W9 510 aaPredicted RBP15.32■□□□□ 0.04
NFXL1-204ENST00000502448 CACNB1Q02641 598 aaPredicted RBP14.93□□□□□ -0.02
NFXL1-204ENST00000502448 PPP6R1Q9UPN7 881 aa14.52□□□□□ -0.09
NFXL1-204ENST00000502448 ADRA2BP18089 450 aa14.39□□□□□ -0.11
NFXL1-204ENST00000502448 POTEHQ6S545 545 aa14.21□□□□□ -0.13
NFXL1-204ENST00000502448 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
NFXL1-204ENST00000502448 RNF39Q9H2S5 420 aa13.77□□□□□ -0.21
NFXL1-204ENST00000502448 PLPPR3Q6T4P5 718 aa13.75□□□□□ -0.21
NFXL1-204ENST00000502448 MAPK8IP2Q13387 824 aaPredicted RBP13.68□□□□□ -0.22
NFXL1-204ENST00000502448 C1QBPQ07021 282 aaKnown RBP13.48□□□□□ -0.25
NFXL1-204ENST00000502448 DCAF8L1A6NGE4 600 aa13.41□□□□□ -0.26
NFXL1-204ENST00000502448 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
NFXL1-204ENST00000502448 HOXD11P31277 338 aaPredicted RBP12.77□□□□□ -0.36
NFXL1-204ENST00000502448 DNAJC5BQ9UF47 199 aa12.62□□□□□ -0.39
NFXL1-204ENST00000502448 SP7Q8TDD2 431 aaPredicted RBP12.6□□□□□ -0.39
NFXL1-204ENST00000502448 DSG3P32926 999 aa12.38□□□□□ -0.43
NFXL1-204ENST00000502448 PLSCR2Q9NRY7 297 aa12.38□□□□□ -0.43
NFXL1-204ENST00000502448 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
NFXL1-204ENST00000502448 CHRDL2Q6WN34 429 aa12.2□□□□□ -0.46
NFXL1-204ENST00000502448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.18□□□□□ -0.46
NFXL1-204ENST00000502448 CAPN15O75808 1086 aa12.1□□□□□ -0.47
NFXL1-204ENST00000502448 SPINK5Q9NQ38 1064 aaPredicted RBP12.04□□□□□ -0.48
NFXL1-204ENST00000502448 CNKSR2Q8WXI2 1034 aa11.99□□□□□ -0.49
NFXL1-204ENST00000502448 PPP4R3CPQ6ZMV5 832 aa11.86□□□□□ -0.51
NFXL1-204ENST00000502448 RBM42Q9BTD8 480 aaKnown RBP11.86□□□□□ -0.51
NFXL1-204ENST00000502448 HAX1O00165 279 aa11.79□□□□□ -0.52
NFXL1-204ENST00000502448 LHX8Q68G74 356 aa11.79□□□□□ -0.52
NFXL1-204ENST00000502448 SLC24A1O60721 1099 aa11.74□□□□□ -0.53
NFXL1-204ENST00000502448 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
NFXL1-204ENST00000502448 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
NFXL1-204ENST00000502448 ABCB7O75027 752 aa11.69□□□□□ -0.54
NFXL1-204ENST00000502448 PIP4P2Q8N4L2 257 aa11.59□□□□□ -0.55
NFXL1-204ENST00000502448 TRHP20396 242 aaPredicted RBP11.54□□□□□ -0.56
NFXL1-204ENST00000502448 EVX2Q03828 476 aa11.53□□□□□ -0.56
NFXL1-204ENST00000502448 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
NFXL1-204ENST00000502448 APLP2Q06481 763 aa11.26□□□□□ -0.61
NFXL1-204ENST00000502448 FXR2P51116 673 aaKnown RBP eCLIP11.26□□□□□ -0.61
NFXL1-204ENST00000502448 KCNA4P22459 653 aa11.25□□□□□ -0.61
NFXL1-204ENST00000502448 AKT1S1Q96B36 256 aa11.25□□□□□ -0.61
NFXL1-204ENST00000502448 POTEMA6NI47 508 aa11.21□□□□□ -0.62
NFXL1-204ENST00000502448 CSRNP3Q8WYN3 585 aa11.19□□□□□ -0.62
NFXL1-204ENST00000502448 GABBR2O75899 941 aa11.18□□□□□ -0.62
NFXL1-204ENST00000502448 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
NFXL1-204ENST00000502448 POTEGQ6S5H5 508 aa11.11□□□□□ -0.63
NFXL1-204ENST00000502448 PCDH10Q9P2E7 1040 aa11.08□□□□□ -0.64
NFXL1-204ENST00000502448 PITPNM1O00562 1244 aa11.06□□□□□ -0.64
NFXL1-204ENST00000502448 RTN4Q9NQC3 1192 aaKnown RBP11.01□□□□□ -0.65
NFXL1-204ENST00000502448 AMER1Q5JTC6 1135 aaPredicted RBP10.98□□□□□ -0.65
NFXL1-204ENST00000502448 NCBP3Q53F19 620 aaKnown RBP10.97□□□□□ -0.65
NFXL1-204ENST00000502448 C19orf67A6NJJ6 358 aa10.96□□□□□ -0.65
NFXL1-204ENST00000502448 POTEIP0CG38 1075 aa10.93□□□□□ -0.66
NFXL1-204ENST00000502448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.88□□□□□ -0.67
NFXL1-204ENST00000502448 HNRNPUL2Q1KMD3 747 aaKnown RBP10.88□□□□□ -0.67
NFXL1-204ENST00000502448 POLA2Q14181 598 aa10.87□□□□□ -0.67
NFXL1-204ENST00000502448 SLC4A1APQ9BWU0 796 aaKnown RBP10.87□□□□□ -0.67
NFXL1-204ENST00000502448 OTUD5Q96G74 571 aa10.81□□□□□ -0.68
NFXL1-204ENST00000502448 NPM3O75607 178 aaKnown RBP10.78□□□□□ -0.68
NFXL1-204ENST00000502448 PRKAR2AP13861 404 aaKnown RBP10.76□□□□□ -0.69
NFXL1-204ENST00000502448 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
NFXL1-204ENST00000502448 SLC4A2P04920 1241 aa10.69□□□□□ -0.7
NFXL1-204ENST00000502448 OSCARQ8IYS5 282 aa10.6□□□□□ -0.71
NFXL1-204ENST00000502448 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
NFXL1-204ENST00000502448 POTEB2H3BUK9 544 aa10.54□□□□□ -0.72
NFXL1-204ENST00000502448 ZBTB12Q9Y330 459 aaPredicted RBP10.53□□□□□ -0.72
NFXL1-204ENST00000502448 LCE2DQ5TA82 110 aaPredicted RBP10.49□□□□□ -0.73
NFXL1-204ENST00000502448 CLCN6P51797 869 aa10.47□□□□□ -0.73
NFXL1-204ENST00000502448 ZBTB22O15209 634 aa10.42□□□□□ -0.74
NFXL1-204ENST00000502448 FAM163AQ96GL9 167 aaPredicted RBP10.38□□□□□ -0.75
NFXL1-204ENST00000502448 CDAN1Q8IWY9 1227 aa10.35□□□□□ -0.75
NFXL1-204ENST00000502448 CLEC11AQ9Y240 323 aa10.35□□□□□ -0.75
NFXL1-204ENST00000502448 CD44P16070 742 aaKnown RBP10.33□□□□□ -0.76
NFXL1-204ENST00000502448 CHADLQ6NUI6 762 aa10.31□□□□□ -0.76
NFXL1-204ENST00000502448 SPDYE1Q8NFV5 336 aaPredicted RBP10.28□□□□□ -0.76
NFXL1-204ENST00000502448 MMRN1Q13201 1228 aa10.27□□□□□ -0.77
NFXL1-204ENST00000502448 DAXXQ9UER7 740 aaPredicted RBP10.23□□□□□ -0.77
NFXL1-204ENST00000502448 PRKCSHP14314 528 aaPredicted RBP10.14□□□□□ -0.79
NFXL1-204ENST00000502448 MAMSTRQ6ZN01 415 aa10.14□□□□□ -0.79
NFXL1-204ENST00000502448 POTEJP0CG39 1038 aa10.13□□□□□ -0.79
NFXL1-204ENST00000502448 SPNS2Q8IVW8 549 aa10.13□□□□□ -0.79
NFXL1-204ENST00000502448 ZNF579Q8NAF0 562 aaKnown RBP10.09□□□□□ -0.79
NFXL1-204ENST00000502448 GALR2O43603 387 aaPredicted RBP10.08□□□□□ -0.8
NFXL1-204ENST00000502448 BCANQ96GW7 911 aa10.08□□□□□ -0.8
NFXL1-204ENST00000502448 TAOK2Q9UL54 1235 aa10.08□□□□□ -0.8
NFXL1-204ENST00000502448 SPDYE2BA6NHP3 402 aa10.07□□□□□ -0.8
NFXL1-204ENST00000502448 SPDYE6P0CI01 402 aa10.07□□□□□ -0.8
NFXL1-204ENST00000502448 PLCB2Q00722 1185 aa10.07□□□□□ -0.8
NFXL1-204ENST00000502448 SPDYE2Q495Y8 402 aa10.07□□□□□ -0.8
NFXL1-204ENST00000502448 FOXD4L1Q9NU39 408 aa10.04□□□□□ -0.8
NFXL1-204ENST00000502448 PELP1Q8IZL8 1130 aaKnown RBP10.02□□□□□ -0.81
NFXL1-204ENST00000502448 MYCNP04198 464 aaPredicted RBP10.01□□□□□ -0.81
NFXL1-204ENST00000502448 SCUBE2Q9NQ36 999 aa10.01□□□□□ -0.81
NFXL1-204ENST00000502448 FARP1Q9Y4F1 1045 aaPredicted RBP9.99□□□□□ -0.81
NFXL1-204ENST00000502448 FKBP8Q14318 412 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms