RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 ZSCAN12O43309 604 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 SERPINC1P01008 464 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 RXRAP19793 462 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 SART3Q15020 963 aaKnown RBP16.56■□□□□ 0.24
NEAT1-201ENST00000499732 KRT40Q6A162 431 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 NFXL1Q6ZNB6 911 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 MICU3Q86XE3 530 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 MAP3K14Q99558 947 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 TAOK3Q9H2K8 898 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 GJB4Q9NTQ9 266 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 DNAI1Q9UI46 699 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 PSME4Q14997 1843 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 USP17L3A6NCW0 530 aa16.55■□□□□ 0.24
NEAT1-201ENST00000499732 USP17L4A6NCW7 530 aa16.55■□□□□ 0.24
NEAT1-201ENST00000499732 GOLGA6L9A6NEM1 432 aa16.55■□□□□ 0.24
NEAT1-201ENST00000499732 TPM1P09493 284 aa16.55■□□□□ 0.24
NEAT1-201ENST00000499732 CYP2D6P10635 497 aa16.55■□□□□ 0.24
NEAT1-201ENST00000499732 ATP1A3P13637 1013 aa16.55■□□□□ 0.24
NEAT1-201ENST00000499732 MARCKSP29966 332 aaPredicted RBP16.55■□□□□ 0.24
NEAT1-201ENST00000499732 CDC27P30260 824 aa16.55■□□□□ 0.24
NEAT1-201ENST00000499732 WTAPQ15007 396 aa16.55■□□□□ 0.24
NEAT1-201ENST00000499732 USP17L1Q7RTZ2 530 aa16.55■□□□□ 0.24
NEAT1-201ENST00000499732 LARGE2Q8N3Y3 721 aa16.55■□□□□ 0.24
NEAT1-201ENST00000499732 CERS5Q8N5B7 392 aa16.55■□□□□ 0.24
NEAT1-201ENST00000499732 MYL10Q9BUA6 226 aa16.55■□□□□ 0.24
NEAT1-201ENST00000499732 SLC12A7Q9Y666 1083 aa16.55■□□□□ 0.24
NEAT1-201ENST00000499732 ZNF646O15015 1829 aaPredicted RBP16.55■□□□□ 0.24
NEAT1-201ENST00000499732 GAKO14976 1311 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 COL4A5P29400 1685 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 GPR75-ASB3A0A0A6YYF3 556 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 CCDC66A2RUB6 948 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 ARHGAP6O43182 974 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 ORC4O43929 436 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 TOP1P11387 765 aaKnown RBP16.54■□□□□ 0.24
NEAT1-201ENST00000499732 GNL2Q13823 731 aaKnown RBP16.54■□□□□ 0.24
NEAT1-201ENST00000499732 SEC23AQ15436 765 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 CFAP100Q494V2 611 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 DACT2Q5SW24 774 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 TRIM65Q6PJ69 517 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 FAM217BQ9NTX9 383 aaPredicted RBP16.54■□□□□ 0.24
NEAT1-201ENST00000499732 HOOK1Q9UJC3 728 aaKnown RBP16.54■□□□□ 0.24
NEAT1-201ENST00000499732 TNKSO95271 1327 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 GOLGA8AA7E2F4 631 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 PRDM1O75626 825 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 USP17L8P0C7I0 530 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 PLCG2P16885 1265 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 BTDP43251 543 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 CLCN6P51797 869 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 TRIM29Q14134 588 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 UBAC1Q9BSL1 405 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 MRIQ9BWK5 157 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 KCNQ5Q9NR82 932 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 MCM9Q9NXL9 1143 aa16.54■□□□□ 0.24
NEAT1-201ENST00000499732 ERICH2A1L162 156 aa16.53■□□□□ 0.24
NEAT1-201ENST00000499732 EFCAB8A8MWE9 144 aa16.53■□□□□ 0.24
NEAT1-201ENST00000499732 IARSP41252 1262 aaKnown RBP16.53■□□□□ 0.24
NEAT1-201ENST00000499732 USP5P45974 858 aa16.53■□□□□ 0.24
NEAT1-201ENST00000499732 PNOCQ13519 176 aa16.53■□□□□ 0.24
NEAT1-201ENST00000499732 NTRK3Q16288 839 aa16.53■□□□□ 0.24
NEAT1-201ENST00000499732 ARHGAP29Q52LW3 1261 aa16.53■□□□□ 0.24
NEAT1-201ENST00000499732 KRBA2Q6ZNG9 492 aa16.53■□□□□ 0.24
NEAT1-201ENST00000499732 METTL16Q86W50 562 aaKnown RBP16.53■□□□□ 0.24
NEAT1-201ENST00000499732 REXO1L1PQ8IX06 675 aa16.53■□□□□ 0.24
NEAT1-201ENST00000499732 UBXN4Q92575 508 aa16.53■□□□□ 0.24
NEAT1-201ENST00000499732 DPF2Q92785 391 aa16.53■□□□□ 0.24
NEAT1-201ENST00000499732 TTF2Q9UNY4 1162 aaKnown RBP16.53■□□□□ 0.24
NEAT1-201ENST00000499732 ROBO3Q96MS0 1386 aa16.53■□□□□ 0.24
NEAT1-201ENST00000499732 YDJCA8MPS7 323 aa16.52■□□□□ 0.24
NEAT1-201ENST00000499732 ATP8B1O43520 1251 aa16.52■□□□□ 0.24
NEAT1-201ENST00000499732 RANBP6O60518 1105 aaKnown RBP16.52■□□□□ 0.24
NEAT1-201ENST00000499732 PRELPP51888 382 aa16.52■□□□□ 0.24
NEAT1-201ENST00000499732 HDLBPQ00341 1268 aaKnown RBP16.52■□□□□ 0.24
NEAT1-201ENST00000499732 C12orf60Q5U649 245 aa16.52■□□□□ 0.24
NEAT1-201ENST00000499732 HHIPL2Q6UWX4 724 aa16.52■□□□□ 0.24
NEAT1-201ENST00000499732 TMTC2Q8N394 836 aa16.52■□□□□ 0.24
NEAT1-201ENST00000499732 DNAJC5GQ8N7S2 189 aa16.52■□□□□ 0.24
NEAT1-201ENST00000499732 CNNM3Q8NE01 707 aa16.52■□□□□ 0.24
NEAT1-201ENST00000499732 MNS1Q8NEH6 495 aa16.52■□□□□ 0.24
NEAT1-201ENST00000499732 ZSCAN10Q96SZ4 725 aaPredicted RBP16.52■□□□□ 0.24
NEAT1-201ENST00000499732 DACH1Q9UI36 760 aa16.52■□□□□ 0.24
NEAT1-201ENST00000499732 FHOD1Q9Y613 1164 aa16.52■□□□□ 0.24
NEAT1-201ENST00000499732 ADAMTSL1Q8N6G6 1762 aa16.52■□□□□ 0.24
NEAT1-201ENST00000499732 MYH1P12882 1939 aa16.52■□□□□ 0.24
NEAT1-201ENST00000499732 TADA3O75528 432 aa16.52■□□□□ 0.23
NEAT1-201ENST00000499732 RCAN1P53805 252 aa16.52■□□□□ 0.23
NEAT1-201ENST00000499732 TMEM139Q8IV31 216 aa16.52■□□□□ 0.23
NEAT1-201ENST00000499732 ENAHQ8N8S7 591 aaPredicted RBP16.52■□□□□ 0.23
NEAT1-201ENST00000499732 LRRN4CLQ8ND94 238 aa16.52■□□□□ 0.23
NEAT1-201ENST00000499732 TGFBRAP1Q8WUH2 860 aa16.52■□□□□ 0.23
NEAT1-201ENST00000499732 WASF1Q92558 559 aa16.52■□□□□ 0.23
NEAT1-201ENST00000499732 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.52■□□□□ 0.23
NEAT1-201ENST00000499732 MXD3Q9BW11 206 aa16.52■□□□□ 0.23
NEAT1-201ENST00000499732 KCNH3Q9ULD8 1083 aa16.52■□□□□ 0.23
NEAT1-201ENST00000499732 ZRANB2O95218 330 aaKnown RBP eCLIP16.51■□□□□ 0.235e-24■■■□□ 17
NEAT1-201ENST00000499732 RHBDL3P58872 404 aa16.51■□□□□ 0.23
NEAT1-201ENST00000499732 TBX2Q13207 712 aaPredicted RBP16.51■□□□□ 0.23
NEAT1-201ENST00000499732 ISM2Q6H9L7 571 aa16.51■□□□□ 0.23
NEAT1-201ENST00000499732 TMCO3Q6UWJ1 677 aa16.51■□□□□ 0.23
NEAT1-201ENST00000499732 NIM1KQ8IY84 436 aa16.51■□□□□ 0.23
NEAT1-201ENST00000499732 ZNF654Q8IZM8 581 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms