RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 FCER1AP12319 257 aa11.09□□□□□ -0.63
CCDC171-209ENST00000498725 PBX2P40425 430 aa11.09□□□□□ -0.63
CCDC171-209ENST00000498725 RNF180Q86T96 592 aa11.09□□□□□ -0.63
CCDC171-209ENST00000498725 TRMT2AQ8IZ69 625 aaKnown RBP11.09□□□□□ -0.63
CCDC171-209ENST00000498725 SLC44A5Q8NCS7 719 aa11.09□□□□□ -0.63
CCDC171-209ENST00000498725 SHCBP1Q8NEM2 672 aa11.09□□□□□ -0.63
CCDC171-209ENST00000498725 TIFAQ96CG3 184 aa11.09□□□□□ -0.63
CCDC171-209ENST00000498725 GAS2L1Q99501 681 aaPredicted RBP11.09□□□□□ -0.63
CCDC171-209ENST00000498725 MMP19Q99542 508 aa11.09□□□□□ -0.63
CCDC171-209ENST00000498725 PRDM12Q9H4Q4 367 aa11.09□□□□□ -0.63
CCDC171-209ENST00000498725 MROH8Q9H579 483 aa11.09□□□□□ -0.63
CCDC171-209ENST00000498725 GPR108Q9NPR9 543 aa11.09□□□□□ -0.63
CCDC171-209ENST00000498725 DBNLQ9UJU6 430 aaKnown RBP11.09□□□□□ -0.63
CCDC171-209ENST00000498725 SSUH2Q9Y2M2 353 aa11.09□□□□□ -0.63
CCDC171-209ENST00000498725 MAGEB6P1A0A0J9YX57 407 aa11.08□□□□□ -0.64
CCDC171-209ENST00000498725 DCDC2CA8MYV0 355 aa11.08□□□□□ -0.64
CCDC171-209ENST00000498725 APBB1O00213 710 aa11.08□□□□□ -0.64
CCDC171-209ENST00000498725 KIAA0355O15063 1070 aa11.08□□□□□ -0.64
CCDC171-209ENST00000498725 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
CCDC171-209ENST00000498725 CYP2D6P10635 497 aa11.08□□□□□ -0.64
CCDC171-209ENST00000498725 TRIM27P14373 513 aa11.08□□□□□ -0.64
CCDC171-209ENST00000498725 IGFBP4P22692 258 aa11.08□□□□□ -0.64
CCDC171-209ENST00000498725 SLC4A3P48751 1232 aa11.08□□□□□ -0.64
CCDC171-209ENST00000498725 FAAP100Q0VG06 881 aa11.08□□□□□ -0.64
CCDC171-209ENST00000498725 C1orf53Q5VUE5 145 aa11.08□□□□□ -0.64
CCDC171-209ENST00000498725 VTI1AQ96AJ9 217 aa11.08□□□□□ -0.64
CCDC171-209ENST00000498725 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCDC171-209ENST00000498725 MCM9Q9NXL9 1143 aa11.08□□□□□ -0.64
CCDC171-209ENST00000498725 CDH23Q9H251 3354 aa11.07□□□□□ -0.64
CCDC171-209ENST00000498725 MCM3APO60318 1980 aa11.07□□□□□ -0.64
CCDC171-209ENST00000498725 ZNF316A6NFI3 1004 aaPredicted RBP11.07□□□□□ -0.64
CCDC171-209ENST00000498725 ACRP10323 421 aa11.07□□□□□ -0.64
CCDC171-209ENST00000498725 IRX5P78411 483 aaPredicted RBP11.07□□□□□ -0.64
CCDC171-209ENST00000498725 MAP3K12Q12852 859 aa11.07□□□□□ -0.64
CCDC171-209ENST00000498725 TMEM132BQ14DG7 1078 aa11.07□□□□□ -0.64
CCDC171-209ENST00000498725 MB21D1Q8N884 522 aa11.07□□□□□ -0.64
CCDC171-209ENST00000498725 SDR42E1Q8WUS8 393 aa11.07□□□□□ -0.64
CCDC171-209ENST00000498725 ARHGAP45Q92619 1136 aa11.07□□□□□ -0.64
CCDC171-209ENST00000498725 EAF2Q96CJ1 260 aaPredicted RBP11.07□□□□□ -0.64
CCDC171-209ENST00000498725 DYNLL2Q96FJ2 89 aa11.07□□□□□ -0.64
CCDC171-209ENST00000498725 TINF2Q9BSI4 451 aa11.07□□□□□ -0.64
CCDC171-209ENST00000498725 STARD7Q9NQZ5 370 aa11.07□□□□□ -0.64
CCDC171-209ENST00000498725 FBXO28Q9NVF7 368 aa11.07□□□□□ -0.64
CCDC171-209ENST00000498725 IPO8O15397 1037 aaKnown RBP11.06□□□□□ -0.64
CCDC171-209ENST00000498725 ACLYP53396 1101 aa11.06□□□□□ -0.64
CCDC171-209ENST00000498725 CERS3Q8IU89 383 aa11.06□□□□□ -0.64
CCDC171-209ENST00000498725 ABRAQ8N0Z2 381 aa11.06□□□□□ -0.64
CCDC171-209ENST00000498725 MICALL1Q8N3F8 863 aa11.06□□□□□ -0.64
CCDC171-209ENST00000498725 TMEM57Q8N5G2 664 aa11.06□□□□□ -0.64
CCDC171-209ENST00000498725 IL27Q8NEV9 243 aa11.06□□□□□ -0.64
CCDC171-209ENST00000498725 ADAMTS19Q8TE59 1207 aa11.06□□□□□ -0.64
CCDC171-209ENST00000498725 ZNF512BQ96KM6 892 aaPredicted RBP11.06□□□□□ -0.64
CCDC171-209ENST00000498725 RIOK1Q9BRS2 568 aaKnown RBP11.06□□□□□ -0.64
CCDC171-209ENST00000498725 CRNKL1Q9BZJ0 848 aaKnown RBP11.06□□□□□ -0.64
CCDC171-209ENST00000498725 PPP1R12CQ9BZL4 782 aa11.06□□□□□ -0.64
CCDC171-209ENST00000498725 ARHGEF10LQ9HCE6 1279 aa11.06□□□□□ -0.64
CCDC171-209ENST00000498725 THEGQ9P2T0 379 aa11.06□□□□□ -0.64
CCDC171-209ENST00000498725 SYNRGQ9UMZ2 1314 aa11.06□□□□□ -0.64
CCDC171-209ENST00000498725 MYADML2A6NDP7 307 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 SLC25A27O95847 323 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 TIMP1P01033 207 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 ZNF865P0CJ78 1059 aaPredicted RBP11.05□□□□□ -0.64
CCDC171-209ENST00000498725 AKR1A1P14550 325 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 AKR1B1P15121 316 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 ATP8B2P98198 1209 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 ICA1Q05084 483 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 GABPAQ06546 454 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 KCTD2Q14681 263 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 KCNA10Q16322 511 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 TMEM179Q6ZVK1 233 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 SSH3Q8TE77 659 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 NUP133Q8WUM0 1156 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 ASB2Q96Q27 587 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 UHRF1Q96T88 793 aaPredicted RBP11.05□□□□□ -0.64
CCDC171-209ENST00000498725 PBX4Q9BYU1 374 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 ZHX1Q9UKY1 873 aaPredicted RBP11.05□□□□□ -0.64
CCDC171-209ENST00000498725 CNPY2Q9Y2B0 182 aa11.05□□□□□ -0.64
CCDC171-209ENST00000498725 CYP2D7A0A087X1C5 515 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 SMIM22K7EJ46 135 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 ADAMTS4O75173 837 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 CSF2RAP15509 400 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 MRPS5P82675 430 aaKnown RBP11.04□□□□□ -0.64
CCDC171-209ENST00000498725 PPIGQ13427 754 aaKnown RBP eCLIP11.04□□□□□ -0.64
CCDC171-209ENST00000498725 ZNF792Q3KQV3 632 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 TMEM240Q5SV17 173 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 SLC9C2Q5TAH2 1124 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 ZNF365Q70YC5 407 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 C16orf59Q7L2K0 433 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 AACSQ86V21 672 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 SIAH1Q8IUQ4 282 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 LCORLQ8N3X6 602 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 ATXN2LQ8WWM7 1075 aaKnown RBP11.04□□□□□ -0.64
CCDC171-209ENST00000498725 FAM122AQ96E09 287 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 NECAB3Q96P71 396 aaPredicted RBP11.04□□□□□ -0.64
CCDC171-209ENST00000498725 NKX2-4Q9H2Z4 354 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 VCPKMTQ9H867 229 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 ARMT1Q9H993 441 aa11.04□□□□□ -0.64
CCDC171-209ENST00000498725 MYO9BQ13459 2157 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 WDR46O15213 610 aaKnown RBP11.03□□□□□ -0.64
CCDC171-209ENST00000498725 PRKAB2O43741 272 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms