RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 CDC5LQ99459 802 aaKnown RBP7.04□□□□□ -1.28
SPTA1-209ENST00000498708 TRIM34Q9BYJ4 488 aa7.04□□□□□ -1.28
SPTA1-209ENST00000498708 C11orf16Q9NQ32 467 aa7.04□□□□□ -1.28
SPTA1-209ENST00000498708 TMPRSS4Q9NRS4 437 aa7.04□□□□□ -1.28
SPTA1-209ENST00000498708 GJD2Q9UKL4 321 aa7.04□□□□□ -1.28
SPTA1-209ENST00000498708 ZBBXA8MT70 800 aa7.03□□□□□ -1.28
SPTA1-209ENST00000498708 LILRA1O75019 489 aa7.03□□□□□ -1.28
SPTA1-209ENST00000498708 ITGA6P23229 1130 aa7.03□□□□□ -1.28
SPTA1-209ENST00000498708 PTGIRP43119 386 aa7.03□□□□□ -1.28
SPTA1-209ENST00000498708 TNNI2P48788 182 aa7.03□□□□□ -1.28
SPTA1-209ENST00000498708 NEXNQ0ZGT2 675 aa7.03□□□□□ -1.28
SPTA1-209ENST00000498708 CCDC85BQ15834 202 aaPredicted RBP7.03□□□□□ -1.28
SPTA1-209ENST00000498708 TMEM31Q5JXX7 168 aa7.03□□□□□ -1.28
SPTA1-209ENST00000498708 KSR2Q6VAB6 950 aa7.03□□□□□ -1.28
SPTA1-209ENST00000498708 MIGA2Q7L4E1 593 aa7.03□□□□□ -1.28
SPTA1-209ENST00000498708 TTLL11Q8NHH1 800 aa7.03□□□□□ -1.28
SPTA1-209ENST00000498708 COA7Q96BR5 231 aa7.03□□□□□ -1.28
SPTA1-209ENST00000498708 STK31Q9BXU1 1019 aa7.03□□□□□ -1.28
SPTA1-209ENST00000498708 PRKRIP1Q9H875 184 aaPredicted RBP7.03□□□□□ -1.28
SPTA1-209ENST00000498708 ZNF395Q9H8N7 513 aaPredicted RBP7.03□□□□□ -1.28
SPTA1-209ENST00000498708 MYH3P11055 1940 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 NEURL1BA8MQ27 555 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 IL1R1P14778 569 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 IGHMBP2P38935 993 aaKnown RBP7.02□□□□□ -1.29
SPTA1-209ENST00000498708 KCNJ4P48050 445 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 FKBP1AP62942 108 aaKnown RBP7.02□□□□□ -1.29
SPTA1-209ENST00000498708 CALD1Q05682 793 aaKnown RBP7.02□□□□□ -1.29
SPTA1-209ENST00000498708 GRIK5Q16478 980 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 CCDC184Q52MB2 194 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 MAP3K21Q5TCX8 1036 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 UBE3BQ7Z3V4 1068 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 ANKRD13CQ8N6S4 541 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 RNF217Q8TC41 542 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 TRIB2Q92519 343 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 BADQ92934 168 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 SENP6Q9GZR1 1112 aaPredicted RBP7.02□□□□□ -1.29
SPTA1-209ENST00000498708 SERPINA10Q9UK55 444 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 TTF2Q9UNY4 1162 aaKnown RBP7.02□□□□□ -1.29
SPTA1-209ENST00000498708 CHD7Q9P2D1 2997 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 CFAP54Q96N23 3096 aa7.02□□□□□ -1.29
SPTA1-209ENST00000498708 FRMPD3Q5JV73 1810 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 PLIN1O60240 522 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 TAF5LO75529 589 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 CCND3P30281 292 aaPredicted RBP7.01□□□□□ -1.29
SPTA1-209ENST00000498708 ADD1P35611 737 aaKnown RBP7.01□□□□□ -1.29
SPTA1-209ENST00000498708 CRKP46108 304 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 EPHB4P54760 987 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 MCCD1P59942 119 aaPredicted RBP7.01□□□□□ -1.29
SPTA1-209ENST00000498708 TFF2Q03403 129 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 ADGRE1Q14246 886 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 TWISTNBQ3B726 338 aaPredicted RBP7.01□□□□□ -1.29
SPTA1-209ENST00000498708 RNF20Q5VTR2 975 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 SV2AQ7L0J3 742 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 GPR161Q8N6U8 529 aaKnown RBP7.01□□□□□ -1.29
SPTA1-209ENST00000498708 IL27Q8NEV9 243 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 CNTNAP3BQ96NU0 1288 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 MPHOSPH8Q99549 860 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 CNTNAP3Q9BZ76 1288 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 ANKRD2Q9GZV1 360 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 ZNF576Q9H609 170 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 ZNF112Q9UJU3 913 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 CHMP3Q9Y3E7 222 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 PTPRFP10586 1907 aa7.01□□□□□ -1.29
SPTA1-209ENST00000498708 PLXNA1Q9UIW2 1896 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 A0A0G2JLL6 359 aaPredicted RBP7□□□□□ -1.29
SPTA1-209ENST00000498708 H7C1W4 665 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 CXCL11O14625 94 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 GPR37L1O60883 481 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 KCNQ1P51787 676 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 RTP1P59025 263 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 CHRNDQ07001 517 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 CACNB2Q08289 660 aaPredicted RBP7□□□□□ -1.29
SPTA1-209ENST00000498708 FKBP5Q13451 457 aaPredicted RBP7□□□□□ -1.29
SPTA1-209ENST00000498708 GCKRQ14397 625 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 AKNAD1Q5T1N1 836 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 GADL1Q6ZQY3 521 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 LYSMD3Q7Z3D4 306 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 PRRT2Q7Z6L0 340 aaPredicted RBP7□□□□□ -1.29
SPTA1-209ENST00000498708 VWA5B2Q8N398 1253 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 ZNF341Q9BYN7 854 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 PRDM12Q9H4Q4 367 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 PRKAG2Q9UGJ0 569 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 PCDHB9Q9Y5E1 797 aa7□□□□□ -1.29
SPTA1-209ENST00000498708 DMDP11532 3685 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 ANKRD18BA2A2Z9 1011 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 CDC14CA4D256 554 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 APBB1O00213 710 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 EIF5BO60841 1220 aaKnown RBP6.99□□□□□ -1.29
SPTA1-209ENST00000498708 FBXO45P0C2W1 286 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 CYP2B6P20813 491 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 KRT76Q01546 638 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 NHLH1Q02575 133 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 FLIIQ13045 1269 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 MFSD14BQ5SR56 506 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 DCAF15Q66K64 600 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 C15orf52Q6ZUT6 534 aaKnown RBP6.99□□□□□ -1.29
SPTA1-209ENST00000498708 SMCR8Q8TEV9 937 aaPredicted RBP6.99□□□□□ -1.29
SPTA1-209ENST00000498708 DNAAF4Q8WXU2 420 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 ZNF594Q96JF6 807 aaPredicted RBP6.99□□□□□ -1.29
SPTA1-209ENST00000498708 RNPC3Q96LT9 517 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms