RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 FCER1AP12319 257 aa17.77■□□□□ 0.44
TRAF4-212ENST00000498540 ITGB8P26012 769 aa17.77■□□□□ 0.44
TRAF4-212ENST00000498540 SMAD3P84022 425 aaKnown RBP17.77■□□□□ 0.44
TRAF4-212ENST00000498540 TLE2Q04725 743 aa17.77■□□□□ 0.44
TRAF4-212ENST00000498540 MYLIPQ8WY64 445 aa17.77■□□□□ 0.44
TRAF4-212ENST00000498540 PHF24Q9UPV7 400 aa17.77■□□□□ 0.44
TRAF4-212ENST00000498540 CYP2D7A0A087X1C5 515 aa17.76■□□□□ 0.43
TRAF4-212ENST00000498540 WDR46O15213 610 aaKnown RBP17.76■□□□□ 0.43
TRAF4-212ENST00000498540 PGK2P07205 417 aa17.76■□□□□ 0.43
TRAF4-212ENST00000498540 SH2D4AQ9H788 454 aa17.76■□□□□ 0.43
TRAF4-212ENST00000498540 XPNPEP3Q9NQH7 507 aa17.76■□□□□ 0.43
TRAF4-212ENST00000498540 FBXO28Q9NVF7 368 aa17.76■□□□□ 0.43
TRAF4-212ENST00000498540 SPTBN5Q9NRC6 3674 aaKnown RBP17.76■□□□□ 0.43
TRAF4-212ENST00000498540 MYH7P12883 1935 aa17.75■□□□□ 0.43
TRAF4-212ENST00000498540 APBB1O00213 710 aa17.75■□□□□ 0.43
TRAF4-212ENST00000498540 MBD4O95243 580 aa17.75■□□□□ 0.43
TRAF4-212ENST00000498540 PGK1P00558 417 aa17.75■□□□□ 0.43
TRAF4-212ENST00000498540 RARBP10826 455 aa17.75■□□□□ 0.43
TRAF4-212ENST00000498540 TAL1P17542 331 aaPredicted RBP17.75■□□□□ 0.43
TRAF4-212ENST00000498540 EPHB4P54760 987 aa17.75■□□□□ 0.43
TRAF4-212ENST00000498540 PANK1Q8TE04 598 aa17.75■□□□□ 0.43
TRAF4-212ENST00000498540 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.75■□□□□ 0.43
TRAF4-212ENST00000498540 LENG1Q96BZ8 264 aaPredicted RBP17.75■□□□□ 0.43
TRAF4-212ENST00000498540 MMP19Q99542 508 aa17.75■□□□□ 0.43
TRAF4-212ENST00000498540 ADAMTS5Q9UNA0 930 aa17.75■□□□□ 0.43
TRAF4-212ENST00000498540 ROBO3Q96MS0 1386 aa17.75■□□□□ 0.43
TRAF4-212ENST00000498540 SLC25A27O95847 323 aa17.74■□□□□ 0.43
TRAF4-212ENST00000498540 CLTBP09497 229 aa17.74■□□□□ 0.43
TRAF4-212ENST00000498540 CDK8P49336 464 aa17.74■□□□□ 0.43
TRAF4-212ENST00000498540 HSP90AB4PQ58FF6 505 aa17.74■□□□□ 0.43
TRAF4-212ENST00000498540 CLASRPQ8N2M8 674 aaKnown RBP17.74■□□□□ 0.43
TRAF4-212ENST00000498540 TINF2Q9BSI4 451 aa17.74■□□□□ 0.43
TRAF4-212ENST00000498540 BCL11AQ9H165 835 aa17.74■□□□□ 0.43
TRAF4-212ENST00000498540 NRBP1Q9UHY1 535 aa17.74■□□□□ 0.43
TRAF4-212ENST00000498540 GREB1LQ9C091 1923 aaPredicted RBP17.73■□□□□ 0.43
TRAF4-212ENST00000498540 A0A1W2PQ45 241 aaPredicted RBP17.73■□□□□ 0.43
TRAF4-212ENST00000498540 A0A1W2PQY0 241 aa17.73■□□□□ 0.43
TRAF4-212ENST00000498540 CHGBP05060 677 aa17.73■□□□□ 0.43
TRAF4-212ENST00000498540 EEF2P13639 858 aaKnown RBP17.73■□□□□ 0.43
TRAF4-212ENST00000498540 ADD2P35612 726 aa17.73■□□□□ 0.43
TRAF4-212ENST00000498540 ZNF792Q3KQV3 632 aa17.73■□□□□ 0.43
TRAF4-212ENST00000498540 C12orf60Q5U649 245 aa17.73■□□□□ 0.43
TRAF4-212ENST00000498540 RIOX2Q8IUF8 465 aa17.73■□□□□ 0.43
TRAF4-212ENST00000498540 RNPC3Q96LT9 517 aaKnown RBP17.73■□□□□ 0.43
TRAF4-212ENST00000498540 ATP8A2Q9NTI2 1148 aa17.73■□□□□ 0.43
TRAF4-212ENST00000498540 TACC3Q9Y6A5 838 aa17.73■□□□□ 0.43
TRAF4-212ENST00000498540 VWA5AO00534 786 aa17.72■□□□□ 0.43
TRAF4-212ENST00000498540 PQBP1O60828 265 aaKnown RBP17.72■□□□□ 0.43
TRAF4-212ENST00000498540 IFIT2P09913 472 aaKnown RBP17.72■□□□□ 0.43
TRAF4-212ENST00000498540 ZNF865P0CJ78 1059 aaPredicted RBP17.72■□□□□ 0.43
TRAF4-212ENST00000498540 FOSL2P15408 326 aa17.72■□□□□ 0.43
TRAF4-212ENST00000498540 KCTD2Q14681 263 aa17.72■□□□□ 0.43
TRAF4-212ENST00000498540 C16orf86Q6ZW13 317 aa17.72■□□□□ 0.43
TRAF4-212ENST00000498540 RNF180Q86T96 592 aa17.72■□□□□ 0.43
TRAF4-212ENST00000498540 KIF1BPQ96EK5 621 aa17.72■□□□□ 0.43
TRAF4-212ENST00000498540 CCDC17Q96LX7 622 aa17.72■□□□□ 0.43
TRAF4-212ENST00000498540 PAG1Q9NWQ8 432 aa17.72■□□□□ 0.43
TRAF4-212ENST00000498540 ZNF214Q9UL59 606 aaPredicted RBP17.72■□□□□ 0.43
TRAF4-212ENST00000498540 USP17L12C9JPN9 530 aa17.71■□□□□ 0.43
TRAF4-212ENST00000498540 USP17L21D6R901 530 aa17.71■□□□□ 0.43
TRAF4-212ENST00000498540 KIAA0355O15063 1070 aa17.71■□□□□ 0.43
TRAF4-212ENST00000498540 STAT3P40763 770 aa17.71■□□□□ 0.43
TRAF4-212ENST00000498540 FAM83BQ5T0W9 1011 aa17.71■□□□□ 0.43
TRAF4-212ENST00000498540 REPS2Q8NFH8 660 aa17.71■□□□□ 0.43
TRAF4-212ENST00000498540 BOLA2Q9H3K6 86 aa17.71■□□□□ 0.43
TRAF4-212ENST00000498540 PPP1R9AQ9ULJ8 1098 aa17.71■□□□□ 0.43
TRAF4-212ENST00000498540 DIS3Q9Y2L1 958 aaKnown RBP17.71■□□□□ 0.43
TRAF4-212ENST00000498540 RAD21O60216 631 aa17.7■□□□□ 0.42
TRAF4-212ENST00000498540 ADAMTS4O75173 837 aa17.7■□□□□ 0.42
TRAF4-212ENST00000498540 AKR1A1P14550 325 aa17.7■□□□□ 0.42
TRAF4-212ENST00000498540 RAG1P15918 1043 aa17.7■□□□□ 0.42
TRAF4-212ENST00000498540 KANSL2Q9H9L4 492 aa17.7■□□□□ 0.42
TRAF4-212ENST00000498540 ZBED9Q6R2W3 1325 aa17.7■□□□□ 0.42
TRAF4-212ENST00000498540 SYNRGQ9UMZ2 1314 aa17.7■□□□□ 0.42
TRAF4-212ENST00000498540 TMEM265A0A087WTH1 108 aa17.69■□□□□ 0.42
TRAF4-212ENST00000498540 HNRNPUQ00839 825 aaKnown RBP eCLIP17.69■□□□□ 0.42
TRAF4-212ENST00000498540 FPGSQ05932 587 aa17.69■□□□□ 0.42
TRAF4-212ENST00000498540 FAAP100Q0VG06 881 aa17.69■□□□□ 0.42
TRAF4-212ENST00000498540 SIRT2Q8IXJ6 389 aa17.69■□□□□ 0.42
TRAF4-212ENST00000498540 AMOTL1Q8IY63 956 aa17.69■□□□□ 0.42
TRAF4-212ENST00000498540 GOPCQ9HD26 462 aa17.69■□□□□ 0.42
TRAF4-212ENST00000498540 TMEM39AQ9NV64 488 aa17.69■□□□□ 0.42
TRAF4-212ENST00000498540 ACLYP53396 1101 aa17.68■□□□□ 0.42
TRAF4-212ENST00000498540 CTR9Q6PD62 1173 aa17.68■□□□□ 0.42
TRAF4-212ENST00000498540 ANKRD33Q7Z3H0 272 aa17.68■□□□□ 0.42
TRAF4-212ENST00000498540 NUP88Q99567 741 aaPredicted RBP17.68■□□□□ 0.42
TRAF4-212ENST00000498540 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.68■□□□□ 0.42
TRAF4-212ENST00000498540 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.68■□□□□ 0.422e-8■■□□□ 13.1
TRAF4-212ENST00000498540 CNPY2Q9Y2B0 182 aa17.68■□□□□ 0.42
TRAF4-212ENST00000498540 SLC4A4Q9Y6R1 1079 aa17.68■□□□□ 0.42
TRAF4-212ENST00000498540 MCM3APO60318 1980 aa17.68■□□□□ 0.42
TRAF4-212ENST00000498540 ATP5JP18859 108 aa17.67■□□□□ 0.42
TRAF4-212ENST00000498540 COPB2P35606 906 aa17.67■□□□□ 0.42
TRAF4-212ENST00000498540 GRIN2CQ14957 1233 aa17.67■□□□□ 0.42
TRAF4-212ENST00000498540 HAUS7Q99871 368 aa17.67■□□□□ 0.42
TRAF4-212ENST00000498540 TSEN34Q9BSV6 310 aaKnown RBP17.67■□□□□ 0.42
TRAF4-212ENST00000498540 STARD7Q9NQZ5 370 aa17.67■□□□□ 0.42
TRAF4-212ENST00000498540 TTC28Q96AY4 2481 aa17.67■□□□□ 0.42
TRAF4-212ENST00000498540 MYADML2A6NDP7 307 aa17.66■□□□□ 0.42
TRAF4-212ENST00000498540 SNAI1O95863 264 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms