RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.54□□□□□ -0.08
THBS3-209ENST00000498500 A0A1W2PRG0 241 aa14.54□□□□□ -0.08
THBS3-209ENST00000498500 TNFRSF10AO00220 468 aa14.54□□□□□ -0.08
THBS3-209ENST00000498500 PQBP1O60828 265 aaKnown RBP14.54□□□□□ -0.08
THBS3-209ENST00000498500 FCER1AP12319 257 aa14.54□□□□□ -0.08
THBS3-209ENST00000498500 COL9A1P20849 921 aa14.54□□□□□ -0.08
THBS3-209ENST00000498500 EPHB4P54760 987 aa14.54□□□□□ -0.08
THBS3-209ENST00000498500 FPGSQ05932 587 aa14.54□□□□□ -0.08
THBS3-209ENST00000498500 MAP3K12Q12852 859 aa14.54□□□□□ -0.08
THBS3-209ENST00000498500 GRIN2CQ14957 1233 aa14.54□□□□□ -0.08
THBS3-209ENST00000498500 RNF180Q86T96 592 aa14.54□□□□□ -0.08
THBS3-209ENST00000498500 ABRAQ8N0Z2 381 aa14.54□□□□□ -0.08
THBS3-209ENST00000498500 CLASRPQ8N2M8 674 aaKnown RBP14.54□□□□□ -0.08
THBS3-209ENST00000498500 TMEM39AQ9NV64 488 aa14.54□□□□□ -0.08
THBS3-209ENST00000498500 KIAA0355O15063 1070 aa14.53□□□□□ -0.08
THBS3-209ENST00000498500 FLOT1O75955 427 aa14.53□□□□□ -0.08
THBS3-209ENST00000498500 PGK1P00558 417 aa14.53□□□□□ -0.08
THBS3-209ENST00000498500 DNAJB2P25686 324 aa14.53□□□□□ -0.08
THBS3-209ENST00000498500 DSG3P32926 999 aa14.53□□□□□ -0.08
THBS3-209ENST00000498500 USP38Q8NB14 1042 aa14.53□□□□□ -0.08
THBS3-209ENST00000498500 ANTXR1Q9H6X2 564 aa14.53□□□□□ -0.08
THBS3-209ENST00000498500 MAGEB6P1A0A0J9YX57 407 aa14.52□□□□□ -0.09
THBS3-209ENST00000498500 A0A1W2PQ45 241 aaPredicted RBP14.52□□□□□ -0.09
THBS3-209ENST00000498500 A0A1W2PQY0 241 aa14.52□□□□□ -0.09
THBS3-209ENST00000498500 SMARCA5O60264 1052 aaPredicted RBP14.52□□□□□ -0.09
THBS3-209ENST00000498500 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.52□□□□□ -0.09
THBS3-209ENST00000498500 PPM1EQ8WY54 764 aa14.52□□□□□ -0.09
THBS3-209ENST00000498500 ATG4CQ96DT6 458 aa14.52□□□□□ -0.09
THBS3-209ENST00000498500 ZNF576Q9H609 170 aa14.52□□□□□ -0.09
THBS3-209ENST00000498500 DCTPP1Q9H773 170 aa14.52□□□□□ -0.09
THBS3-209ENST00000498500 MCM9Q9NXL9 1143 aa14.52□□□□□ -0.09
THBS3-209ENST00000498500 NRBP1Q9UHY1 535 aa14.52□□□□□ -0.09
THBS3-209ENST00000498500 TTC28Q96AY4 2481 aa14.51□□□□□ -0.09
THBS3-209ENST00000498500 DCDC2CA8MYV0 355 aa14.51□□□□□ -0.09
THBS3-209ENST00000498500 IFIT2P09913 472 aaKnown RBP14.51□□□□□ -0.09
THBS3-209ENST00000498500 GABPAQ06546 454 aa14.51□□□□□ -0.09
THBS3-209ENST00000498500 KIAA1755Q5JYT7 1200 aa14.51□□□□□ -0.09
THBS3-209ENST00000498500 TMED8Q6PL24 325 aaPredicted RBP14.51□□□□□ -0.09
THBS3-209ENST00000498500 TMEM179Q6ZVK1 233 aa14.51□□□□□ -0.09
THBS3-209ENST00000498500 SPICE1Q8N0Z3 855 aa14.51□□□□□ -0.09
THBS3-209ENST00000498500 MMP19Q99542 508 aa14.51□□□□□ -0.09
THBS3-209ENST00000498500 RIOK1Q9BRS2 568 aaKnown RBP14.51□□□□□ -0.09
THBS3-209ENST00000498500 TINF2Q9BSI4 451 aa14.51□□□□□ -0.09
THBS3-209ENST00000498500 CRNKL1Q9BZJ0 848 aaKnown RBP14.51□□□□□ -0.09
THBS3-209ENST00000498500 LRRCC1Q9C099 1032 aa14.51□□□□□ -0.09
THBS3-209ENST00000498500 ARHGEF10LQ9HCE6 1279 aa14.51□□□□□ -0.09
THBS3-209ENST00000498500 BAZ2AQ9UIF9 1905 aaKnown RBP14.51□□□□□ -0.09
THBS3-209ENST00000498500 MUC3AQ02505 3323 aa14.5□□□□□ -0.09
THBS3-209ENST00000498500 SLC25A27O95847 323 aa14.5□□□□□ -0.09
THBS3-209ENST00000498500 PGK2P07205 417 aa14.5□□□□□ -0.09
THBS3-209ENST00000498500 EVX2Q03828 476 aa14.5□□□□□ -0.09
THBS3-209ENST00000498500 SLC44A5Q8NCS7 719 aa14.5□□□□□ -0.09
THBS3-209ENST00000498500 TIFAQ96CG3 184 aa14.5□□□□□ -0.09
THBS3-209ENST00000498500 GAS2L1Q99501 681 aaPredicted RBP14.5□□□□□ -0.09
THBS3-209ENST00000498500 SH2D4AQ9H788 454 aa14.5□□□□□ -0.09
THBS3-209ENST00000498500 STARD7Q9NQZ5 370 aa14.5□□□□□ -0.09
THBS3-209ENST00000498500 AKR1A1P14550 325 aa14.49□□□□□ -0.09
THBS3-209ENST00000498500 TAL1P17542 331 aaPredicted RBP14.49□□□□□ -0.09
THBS3-209ENST00000498500 FAAP100Q0VG06 881 aa14.49□□□□□ -0.09
THBS3-209ENST00000498500 KCTD2Q14681 263 aa14.49□□□□□ -0.09
THBS3-209ENST00000498500 TMEM132BQ14DG7 1078 aa14.49□□□□□ -0.09
THBS3-209ENST00000498500 CCDC129Q6ZRS4 1044 aa14.49□□□□□ -0.09
THBS3-209ENST00000498500 NUP133Q8WUM0 1156 aa14.49□□□□□ -0.09
THBS3-209ENST00000498500 TOX2Q96NM4 488 aa14.49□□□□□ -0.09
THBS3-209ENST00000498500 VCPKMTQ9H867 229 aa14.49□□□□□ -0.09
THBS3-209ENST00000498500 CNPY2Q9Y2B0 182 aa14.49□□□□□ -0.09
THBS3-209ENST00000498500 WDR46O15213 610 aaKnown RBP14.48□□□□□ -0.09
THBS3-209ENST00000498500 ICA1Q05084 483 aa14.48□□□□□ -0.09
THBS3-209ENST00000498500 ANKRD33Q7Z3H0 272 aa14.48□□□□□ -0.09
THBS3-209ENST00000498500 CLEC10AQ8IUN9 316 aa14.48□□□□□ -0.09
THBS3-209ENST00000498500 SDR42E1Q8WUS8 393 aa14.48□□□□□ -0.09
THBS3-209ENST00000498500 LENG1Q96BZ8 264 aaPredicted RBP14.48□□□□□ -0.09
THBS3-209ENST00000498500 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.48□□□□□ -0.09
THBS3-209ENST00000498500 TSEN34Q9BSV6 310 aaKnown RBP14.48□□□□□ -0.09
THBS3-209ENST00000498500 SWAP70Q9UH65 585 aa14.48□□□□□ -0.09
THBS3-209ENST00000498500 DIS3Q9Y2L1 958 aaKnown RBP14.48□□□□□ -0.09
THBS3-209ENST00000498500 TMX2Q9Y320 296 aa14.48□□□□□ -0.09
THBS3-209ENST00000498500 GBF1Q92538 1859 aa14.48□□□□□ -0.09
THBS3-209ENST00000498500 ADAMTS4O75173 837 aa14.47□□□□□ -0.09
THBS3-209ENST00000498500 TIMP1P01033 207 aa14.47□□□□□ -0.09
THBS3-209ENST00000498500 ZNF865P0CJ78 1059 aaPredicted RBP14.47□□□□□ -0.09
THBS3-209ENST00000498500 ATP5JP18859 108 aa14.47□□□□□ -0.09
THBS3-209ENST00000498500 ACLYP53396 1101 aa14.47□□□□□ -0.09
THBS3-209ENST00000498500 TTF1Q15361 905 aaPredicted RBP14.47□□□□□ -0.09
THBS3-209ENST00000498500 ZNF792Q3KQV3 632 aa14.47□□□□□ -0.09
THBS3-209ENST00000498500 SLC9C2Q5TAH2 1124 aa14.47□□□□□ -0.09
THBS3-209ENST00000498500 CCDC174Q6PII3 467 aa14.47□□□□□ -0.09
THBS3-209ENST00000498500 POTEDQ86YR6 584 aa14.47□□□□□ -0.09
THBS3-209ENST00000498500 RIOX2Q8IUF8 465 aa14.47□□□□□ -0.09
THBS3-209ENST00000498500 ATXN2LQ8WWM7 1075 aaKnown RBP14.47□□□□□ -0.09
THBS3-209ENST00000498500 DYNLL2Q96FJ2 89 aa14.47□□□□□ -0.09
THBS3-209ENST00000498500 DNAJC2Q99543 621 aaKnown RBP14.47□□□□□ -0.09
THBS3-209ENST00000498500 BCL11AQ9H165 835 aa14.47□□□□□ -0.09
THBS3-209ENST00000498500 DCP1AQ9NPI6 582 aaPredicted RBP14.47□□□□□ -0.09
THBS3-209ENST00000498500 RAPGEFL1Q9UHV5 662 aa14.47□□□□□ -0.09
THBS3-209ENST00000498500 MCM3APO60318 1980 aa14.47□□□□□ -0.09
THBS3-209ENST00000498500 TCF20Q9UGU0 1960 aaKnown RBP14.47□□□□□ -0.09
THBS3-209ENST00000498500 MOXD2PA6NHM9 499 aa14.46□□□□□ -0.09
THBS3-209ENST00000498500 GOLIM4O00461 696 aa14.46□□□□□ -0.09
THBS3-209ENST00000498500 RAD21O60216 631 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms