RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ZNF333Q96JL9 665 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 NUP88Q99567 741 aaPredicted RBP15.12■□□□□ 0.01
HSPG2-213ENST00000498495 NUDT12Q9BQG2 462 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 TMEM106CQ9BVX2 250 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 TCP11L1Q9NUJ3 509 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 FBXO28Q9NVF7 368 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 GJD2Q9UKL4 321 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 MGAMO43451 1857 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 MYCP01106 439 aaPredicted RBP15.11■□□□□ 0.01
HSPG2-213ENST00000498495 UBXN2AP68543 259 aa15.11■□□□□ 0.01
HSPG2-213ENST00000498495 BMP2KLQ5H9B9 411 aa15.11■□□□□ 0.01
HSPG2-213ENST00000498495 KIAA1211Q6ZU35 1233 aa15.11■□□□□ 0.01
HSPG2-213ENST00000498495 GPR142Q7Z601 462 aa15.11■□□□□ 0.01
HSPG2-213ENST00000498495 TBC1D10CQ8IV04 446 aa15.11■□□□□ 0.01
HSPG2-213ENST00000498495 PXYLP1Q8TE99 480 aa15.11■□□□□ 0.01
HSPG2-213ENST00000498495 NBPF3Q9H094 633 aa15.11■□□□□ 0.01
HSPG2-213ENST00000498495 SPATC1LQ9H0A9 340 aa15.11■□□□□ 0.01
HSPG2-213ENST00000498495 PPP1R9AQ9ULJ8 1098 aa15.11■□□□□ 0.01
HSPG2-213ENST00000498495 GREB1LQ9C091 1923 aaPredicted RBP15.11■□□□□ 0.01
HSPG2-213ENST00000498495 BMP3P12645 472 aa15.1■□□□□ 0.01
HSPG2-213ENST00000498495 CYP2B6P20813 491 aa15.1■□□□□ 0.01
HSPG2-213ENST00000498495 NT5C2P49902 561 aa15.1■□□□□ 0.01
HSPG2-213ENST00000498495 PTH1RQ03431 593 aa15.1■□□□□ 0.01
HSPG2-213ENST00000498495 PRPF38AQ8NAV1 312 aaKnown RBP15.1■□□□□ 0.01
HSPG2-213ENST00000498495 TTC14Q96N46 770 aa15.1■□□□□ 0.01
HSPG2-213ENST00000498495 SLF1Q9BQI6 1058 aa15.1■□□□□ 0.01
HSPG2-213ENST00000498495 MOV10L1Q9BXT6 1211 aaKnown RBP15.1■□□□□ 0.01
HSPG2-213ENST00000498495 PPP4R2Q9NY27 417 aa15.1■□□□□ 0.01
HSPG2-213ENST00000498495 FEM1BQ9UK73 627 aa15.1■□□□□ 0.01
HSPG2-213ENST00000498495 ISY1Q9ULR0 285 aaKnown RBP15.1■□□□□ 0.01
HSPG2-213ENST00000498495 ADAMTS5Q9UNA0 930 aa15.1■□□□□ 0.01
HSPG2-213ENST00000498495 CTDP1Q9Y5B0 961 aaPredicted RBP15.1■□□□□ 0.01
HSPG2-213ENST00000498495 IVNS1ABPQ9Y6Y0 642 aa15.1■□□□□ 0.01
HSPG2-213ENST00000498495 VWA5AO00534 786 aa15.09■□□□□ 0.01
HSPG2-213ENST00000498495 TOP1P11387 765 aaKnown RBP15.09■□□□□ 0.01
HSPG2-213ENST00000498495 ELNP15502 786 aa15.09■□□□□ 0.01
HSPG2-213ENST00000498495 MCCP23508 829 aa15.09■□□□□ 0.01
HSPG2-213ENST00000498495 SLC1A4P43007 532 aa15.09■□□□□ 0.01
HSPG2-213ENST00000498495 NOVP48745 357 aa15.09■□□□□ 0.01
HSPG2-213ENST00000498495 RGS19P49795 217 aa15.09■□□□□ 0.01
HSPG2-213ENST00000498495 IQCA1Q86XH1 822 aa15.09■□□□□ 0.01
HSPG2-213ENST00000498495 SOCS4Q8WXH5 440 aa15.09■□□□□ 0.01
HSPG2-213ENST00000498495 CHMP4CQ96CF2 233 aa15.09■□□□□ 0.01
HSPG2-213ENST00000498495 KRT23Q9C075 422 aa15.09■□□□□ 0.01
HSPG2-213ENST00000498495 MTMR7Q9Y216 660 aa15.09■□□□□ 0.01
HSPG2-213ENST00000498495 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
HSPG2-213ENST00000498495 NEDD4P46934 1319 aa15.09■□□□□ 0.01
HSPG2-213ENST00000498495 B4E1Z4 1266 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 TMEM232C9JQI7 657 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 STRNO43815 780 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 ZBED4O75132 1171 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 KDM4AO75164 1064 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 ERCC3P19447 782 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 PTPREP23469 700 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 STAT3P40763 770 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 RGS2P41220 211 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 TMEM132BQ14DG7 1078 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 CCDC178Q5BJE1 867 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 MORN1Q5T089 497 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 RCSD1Q6JBY9 416 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 CASC1Q6TDU7 716 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 NCAPG2Q86XI2 1143 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 SHCBP1Q8NEM2 672 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 CHURC1Q8WUH1 139 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 MAP4K1Q92918 833 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 KIFC2Q96AC6 838 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 GMCL1Q96IK5 515 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 TMEM47Q9BQJ4 181 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 ZKSCAN3Q9BRR0 538 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 MROH8Q9H579 483 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 CNNM2Q9H8M5 875 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 ZSWIM5Q9P217 1185 aa15.08■□□□□ 0
HSPG2-213ENST00000498495 MYH4Q9Y623 1939 aa15.07■□□□□ 0
HSPG2-213ENST00000498495 SLC15A5A6NIM6 579 aa15.07■□□□□ 0
HSPG2-213ENST00000498495 SLC25A27O95847 323 aa15.07■□□□□ 0
HSPG2-213ENST00000498495 XRCC5P13010 732 aaKnown RBP15.07■□□□□ 0
HSPG2-213ENST00000498495 TRDNQ13061 729 aa15.07■□□□□ 0
HSPG2-213ENST00000498495 IKQ13123 557 aaPredicted RBP15.07■□□□□ 0
HSPG2-213ENST00000498495 MTFR1Q15390 333 aa15.07■□□□□ 0
HSPG2-213ENST00000498495 DGKHQ86XP1 1220 aa15.07■□□□□ 0
HSPG2-213ENST00000498495 NKX2-3Q8TAU0 364 aa15.07■□□□□ 0
HSPG2-213ENST00000498495 ESYT1Q9BSJ8 1104 aa15.07■□□□□ 0
HSPG2-213ENST00000498495 DOCK3Q8IZD9 2030 aa15.07■□□□□ 0
HSPG2-213ENST00000498495 POTEFA5A3E0 1075 aa15.06■□□□□ 0
HSPG2-213ENST00000498495 INHAP05111 366 aa15.06■□□□□ 0
HSPG2-213ENST00000498495 CYP21A2P08686 494 aa15.06■□□□□ 0
HSPG2-213ENST00000498495 FDX1P10109 184 aa15.06■□□□□ 0
HSPG2-213ENST00000498495 SLC4A3P48751 1232 aa15.06■□□□□ 0
HSPG2-213ENST00000498495 STAT2P52630 851 aa15.06■□□□□ 0
HSPG2-213ENST00000498495 MLLT1Q03111 559 aaPredicted RBP15.06■□□□□ 0
HSPG2-213ENST00000498495 MAP2K5Q13163 448 aa15.06■□□□□ 0
HSPG2-213ENST00000498495 KCTD1Q719H9 257 aa15.06■□□□□ 0
HSPG2-213ENST00000498495 DPP9Q86TI2 863 aa15.06■□□□□ 0
HSPG2-213ENST00000498495 FAM160B2Q86V87 743 aa15.06■□□□□ 0
HSPG2-213ENST00000498495 RIOX2Q8IUF8 465 aa15.06■□□□□ 0
HSPG2-213ENST00000498495 TRMT44Q8IYL2 757 aaKnown RBP15.06■□□□□ 0
HSPG2-213ENST00000498495 CPXCR1Q8N123 301 aa15.06■□□□□ 0
HSPG2-213ENST00000498495 USP6NLQ92738 828 aa15.06■□□□□ 0
HSPG2-213ENST00000498495 ZSCAN10Q96SZ4 725 aaPredicted RBP15.06■□□□□ 0
HSPG2-213ENST00000498495 RNF208Q9H0X6 261 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms