RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 NKX2-3Q8TAU0 364 aa18.75■□□□□ 0.59
SSBP1-214ENST00000498107 R3HDMLQ9H3Y0 253 aa18.75■□□□□ 0.59
SSBP1-214ENST00000498107 PRDM10Q9NQV6 1147 aa18.75■□□□□ 0.59
SSBP1-214ENST00000498107 FEM1BQ9UK73 627 aa18.75■□□□□ 0.59
SSBP1-214ENST00000498107 SNX14Q9Y5W7 946 aa18.75■□□□□ 0.59
SSBP1-214ENST00000498107 ADGRA2Q96PE1 1338 aa18.74■□□□□ 0.59
SSBP1-214ENST00000498107 PRC1O43663 620 aa18.74■□□□□ 0.59
SSBP1-214ENST00000498107 DSG3P32926 999 aa18.74■□□□□ 0.59
SSBP1-214ENST00000498107 KIF22Q14807 665 aa18.74■□□□□ 0.59
SSBP1-214ENST00000498107 SEC23AQ15436 765 aa18.74■□□□□ 0.59
SSBP1-214ENST00000498107 FAM110CQ1W6H9 321 aa18.74■□□□□ 0.59
SSBP1-214ENST00000498107 C8orf34Q49A92 452 aa18.74■□□□□ 0.59
SSBP1-214ENST00000498107 TMEM67Q5HYA8 995 aa18.74■□□□□ 0.59
SSBP1-214ENST00000498107 DHX32Q7L7V1 743 aaKnown RBP18.74■□□□□ 0.59
SSBP1-214ENST00000498107 MB21D1Q8N884 522 aa18.74■□□□□ 0.59
SSBP1-214ENST00000498107 PNMA1Q8ND90 353 aa18.74■□□□□ 0.59
SSBP1-214ENST00000498107 ERO1AQ96HE7 468 aa18.74■□□□□ 0.59
SSBP1-214ENST00000498107 CPA4Q9UI42 421 aa18.74■□□□□ 0.59
SSBP1-214ENST00000498107 ISY1Q9ULR0 285 aaKnown RBP18.74■□□□□ 0.59
SSBP1-214ENST00000498107 BCRP11274 1271 aa18.73■□□□□ 0.59
SSBP1-214ENST00000498107 ANTXR2P58335 489 aa18.73■□□□□ 0.59
SSBP1-214ENST00000498107 FAM160B2Q86V87 743 aa18.73■□□□□ 0.59
SSBP1-214ENST00000498107 CHURC1Q8WUH1 139 aa18.73■□□□□ 0.59
SSBP1-214ENST00000498107 ZNF296Q8WUU4 475 aaPredicted RBP18.73■□□□□ 0.59
SSBP1-214ENST00000498107 SLF1Q9BQI6 1058 aa18.73■□□□□ 0.59
SSBP1-214ENST00000498107 RABGAP1Q9Y3P9 1069 aa18.73■□□□□ 0.59
SSBP1-214ENST00000498107 SPDYE16A6NNV3 312 aaPredicted RBP18.72■□□□□ 0.59
SSBP1-214ENST00000498107 PLA2G6O60733 806 aa18.72■□□□□ 0.59
SSBP1-214ENST00000498107 FDX1P10109 184 aa18.72■□□□□ 0.59
SSBP1-214ENST00000498107 STAT2P52630 851 aa18.72■□□□□ 0.59
SSBP1-214ENST00000498107 ANAPC15P60006 121 aa18.72■□□□□ 0.59
SSBP1-214ENST00000498107 CCDC96Q2M329 555 aa18.72■□□□□ 0.59
SSBP1-214ENST00000498107 BLOC1S2Q6QNY1 142 aa18.72■□□□□ 0.59
SSBP1-214ENST00000498107 CHST3Q7LGC8 479 aa18.72■□□□□ 0.59
SSBP1-214ENST00000498107 ANKRD13CQ8N6S4 541 aa18.72■□□□□ 0.59
SSBP1-214ENST00000498107 PRPF38AQ8NAV1 312 aaKnown RBP18.72■□□□□ 0.59
SSBP1-214ENST00000498107 GPRC5AQ8NFJ5 357 aa18.72■□□□□ 0.59
SSBP1-214ENST00000498107 IGDCC4Q8TDY8 1250 aa18.72■□□□□ 0.59
SSBP1-214ENST00000498107 JAKMIP1Q96N16 626 aaKnown RBP18.72■□□□□ 0.59
SSBP1-214ENST00000498107 NUP88Q99567 741 aaPredicted RBP18.72■□□□□ 0.59
SSBP1-214ENST00000498107 MORF4L1Q9UBU8 362 aa18.72■□□□□ 0.59
SSBP1-214ENST00000498107 PPP1R9AQ9ULJ8 1098 aa18.72■□□□□ 0.59
SSBP1-214ENST00000498107 MTMR7Q9Y216 660 aa18.72■□□□□ 0.59
SSBP1-214ENST00000498107 TMEM232C9JQI7 657 aa18.71■□□□□ 0.59
SSBP1-214ENST00000498107 SNHG28P0DPA3 235 aa18.71■□□□□ 0.59
SSBP1-214ENST00000498107 PDHBP11177 359 aa18.71■□□□□ 0.59
SSBP1-214ENST00000498107 LIFRP42702 1097 aa18.71■□□□□ 0.59
SSBP1-214ENST00000498107 CCNA1P78396 465 aa18.71■□□□□ 0.59
SSBP1-214ENST00000498107 IKQ13123 557 aaPredicted RBP18.71■□□□□ 0.59
SSBP1-214ENST00000498107 ADCK5Q3MIX3 580 aa18.71■□□□□ 0.59
SSBP1-214ENST00000498107 GPATCH4Q5T3I0 446 aaKnown RBP18.71■□□□□ 0.59
SSBP1-214ENST00000498107 CATIPQ7Z7H3 387 aa18.71■□□□□ 0.59
SSBP1-214ENST00000498107 TM6SF1Q9BZW5 370 aa18.71■□□□□ 0.59
SSBP1-214ENST00000498107 CTDP1Q9Y5B0 961 aaPredicted RBP18.71■□□□□ 0.59
SSBP1-214ENST00000498107 SH2B2O14492 632 aaPredicted RBP18.7■□□□□ 0.58
SSBP1-214ENST00000498107 FGD1P98174 961 aa18.7■□□□□ 0.58
SSBP1-214ENST00000498107 EXOSC10Q01780 885 aaKnown RBP18.7■□□□□ 0.58
SSBP1-214ENST00000498107 NFXL1Q6ZNB6 911 aa18.7■□□□□ 0.58
SSBP1-214ENST00000498107 PAGR1Q9BTK6 254 aa18.7■□□□□ 0.58
SSBP1-214ENST00000498107 UPF2Q9HAU5 1272 aaKnown RBP18.7■□□□□ 0.58
SSBP1-214ENST00000498107 RBPJLQ9UBG7 517 aa18.7■□□□□ 0.58
SSBP1-214ENST00000498107 CCDC69A6NI79 296 aa18.69■□□□□ 0.58
SSBP1-214ENST00000498107 GNRH1P01148 92 aa18.69■□□□□ 0.58
SSBP1-214ENST00000498107 CASTP20810 708 aaKnown RBP18.69■□□□□ 0.58
SSBP1-214ENST00000498107 ERVK-9P63128 1117 aa18.69■□□□□ 0.58
SSBP1-214ENST00000498107 ERVK-24P63145 666 aa18.69■□□□□ 0.58
SSBP1-214ENST00000498107 LACTBP83111 547 aaPredicted RBP18.69■□□□□ 0.58
SSBP1-214ENST00000498107 ZNF543Q08ER8 600 aa18.69■□□□□ 0.58
SSBP1-214ENST00000498107 ASPRV1Q53RT3 343 aa18.69■□□□□ 0.58
SSBP1-214ENST00000498107 SAMD1Q6SPF0 538 aaPredicted RBP18.69■□□□□ 0.58
SSBP1-214ENST00000498107 KCTD1Q719H9 257 aa18.69■□□□□ 0.58
SSBP1-214ENST00000498107 CCAR1Q8IX12 1150 aaKnown RBP18.69■□□□□ 0.58
SSBP1-214ENST00000498107 ATG4CQ96DT6 458 aa18.69■□□□□ 0.58
SSBP1-214ENST00000498107 LY9Q9HBG7 655 aa18.69■□□□□ 0.58
SSBP1-214ENST00000498107 FBXO28Q9NVF7 368 aa18.69■□□□□ 0.58
SSBP1-214ENST00000498107 ADAMTS5Q9UNA0 930 aa18.69■□□□□ 0.58
SSBP1-214ENST00000498107 CASP8AP2Q9UKL3 1982 aa18.69■□□□□ 0.58
SSBP1-214ENST00000498107 PARP14Q460N5 1801 aa18.69■□□□□ 0.58
SSBP1-214ENST00000498107 RLFQ13129 1914 aa18.68■□□□□ 0.58
SSBP1-214ENST00000498107 VWA5AO00534 786 aa18.68■□□□□ 0.58
SSBP1-214ENST00000498107 ZBED4O75132 1171 aa18.68■□□□□ 0.58
SSBP1-214ENST00000498107 SEC24BO95487 1268 aa18.68■□□□□ 0.58
SSBP1-214ENST00000498107 PARP1P09874 1014 aaKnown RBP18.68■□□□□ 0.58
SSBP1-214ENST00000498107 RPS6KB1P23443 525 aa18.68■□□□□ 0.58
SSBP1-214ENST00000498107 BTNL9Q6UXG8 535 aa18.68■□□□□ 0.58
SSBP1-214ENST00000498107 SYNE3Q6ZMZ3 975 aa18.68■□□□□ 0.58
SSBP1-214ENST00000498107 TNS4Q8IZW8 715 aa18.68■□□□□ 0.58
SSBP1-214ENST00000498107 KIFC2Q96AC6 838 aa18.68■□□□□ 0.58
SSBP1-214ENST00000498107 CYP46A1Q9Y6A2 500 aa18.68■□□□□ 0.58
SSBP1-214ENST00000498107 DDAH1O94760 285 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 CALM1P0DP23 149 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 CALM2P0DP24 149 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 CALM3P0DP25 149 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 HOXD10P28358 340 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 COPB2P35606 906 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 FCGRTP55899 365 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 RUFY3Q7L099 469 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 SGMS1Q86VZ5 419 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 CD99L2Q8TCZ2 262 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 CHMP4CQ96CF2 233 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms