RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 MYO1BO43795 1136 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 TTLL1O95922 423 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 LIG1P18858 919 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 U2AF2P26368 475 aaKnown RBP eCLIP9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 EIF6P56537 245 aaKnown RBP9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 CXCL9Q07325 125 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 TNIP1Q15025 636 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 SF3A1Q15459 793 aaKnown RBP9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 PFKFB3Q16875 520 aaPredicted RBP9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 CCDC96Q2M329 555 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 ASPRV1Q53RT3 343 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 LRSAM1Q6UWE0 723 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 SH3BP5LQ7L8J4 393 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 ZFPM1Q8IX07 1006 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 STAG2Q8N3U4 1231 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 PIBF1Q8WXW3 757 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 PGBD1Q96JS3 809 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 CCDC17Q96LX7 622 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 LZTS2Q9BRK4 669 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 PHF20Q9BVI0 1012 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 SPZ1Q9BXG8 430 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 GRPEL1Q9HAV7 217 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 MTMR4Q9NYA4 1195 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 PI4KBQ9UBF8 816 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 ZNF70Q9UC06 446 aaPredicted RBP9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 CLIC4Q9Y696 253 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 A0A0G2JMZ2 1700 aa9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 FRMPD2Q68DX3 1309 aaPredicted RBP9.3□□□□□ -0.92
PDZRN3-212ENST00000498048 PALM3A6NDB9 673 aaPredicted RBP9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 BTBD18B2RXH4 712 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 SPTLC2O15270 562 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 GDF11O95390 407 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 GOLGA8HP0CJ92 632 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 PDHBP11177 359 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 RPS12P25398 132 aaKnown RBP9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 NOVP48745 357 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 PSEN1P49768 467 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 MRE11P49959 708 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 ATP2B2Q01814 1243 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 ICA1Q05084 483 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 NR5A1Q13285 461 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 CERKLQ49MI3 558 aaPredicted RBP9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 TMEM179Q6ZVK1 233 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 HEATR3Q7Z4Q2 680 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 JMYQ8N9B5 988 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 FSIP1Q8NA03 581 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 MTMR14Q8NCE2 650 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 LINC00301Q8NCQ3 95 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 MRPS27Q92552 414 aaKnown RBP9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 GPKOWQ92917 476 aaPredicted RBP eCLIP9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 SHISA4Q96DD7 197 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 MS4A3Q96HJ5 214 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 PRMT6Q96LA8 375 aaPredicted RBP9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 TSPY26PQ9H489 355 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 SPON1Q9HCB6 807 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 SEC63Q9UGP8 760 aaKnown RBP9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 HERC5Q9UII4 1024 aaKnown RBP9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 RCOR1Q9UKL0 485 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 NOL7Q9UMY1 257 aaKnown RBP9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 V9GY48 417 aaPredicted RBP9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 RLFQ13129 1914 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 KIAA1217Q5T5P2 1943 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 ZNF541Q9H0D2 1346 aa9.29□□□□□ -0.92
PDZRN3-212ENST00000498048 MYH11P35749 1972 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 KLRF2D3W0D1 207 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 LETM1O95202 739 aaPredicted RBP9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 SLURP2P0DP57 97 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 CALML3P27482 149 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 NLRP5P59047 1200 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 MAP3K11Q16584 847 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 ABCB5Q2M3G0 1257 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 RILPL1Q5EBL4 403 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 WWC2Q6AWC2 1192 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 USP17L2Q6R6M4 530 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 GAS2L3Q86XJ1 694 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 HOMER1Q86YM7 354 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 CCAR1Q8IX12 1150 aaKnown RBP9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 OXER1Q8TDS5 423 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 RRP36Q96EU6 259 aaKnown RBP9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 TNMDQ9H2S6 317 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 CLSTN2Q9H4D0 955 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 MYOZ2Q9NPC6 264 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 SH3GLB2Q9NR46 395 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 DACT1Q9NYF0 836 aa9.28□□□□□ -0.92
PDZRN3-212ENST00000498048 A0A1W2PQ27 194 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 A0A1W2PQ64 194 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 A0A1W2PQD8 194 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 FAM205CA6NFA0 338 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 USP17L5A8MUK1 530 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 hCG_1984214I3L0E3 225 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 STXBP3O00186 592 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 CYTH3O43739 400 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 KINO60870 393 aaKnown RBP9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 NR1I2O75469 434 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 TNNI2P48788 182 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 FAM160A1Q05DH4 1040 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 SHROOM1Q2M3G4 852 aaPredicted RBP9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 SLC35G1Q2M3R5 365 aa9.27□□□□□ -0.93
PDZRN3-212ENST00000498048 FKBP1CQ5VVH2 108 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms