RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 F5H6K3 240 aa18.18■□□□□ 0.5
NUP50-219ENST00000497960 HIP1O00291 1037 aa18.18■□□□□ 0.5
NUP50-219ENST00000497960 HSPD1P10809 573 aaKnown RBP18.18■□□□□ 0.5
NUP50-219ENST00000497960 CTDSPL2Q05D32 466 aa18.18■□□□□ 0.5
NUP50-219ENST00000497960 KLRC3Q07444 240 aa18.18■□□□□ 0.5
NUP50-219ENST00000497960 FAM47AQ5JRC9 791 aa18.18■□□□□ 0.5
NUP50-219ENST00000497960 SHCBP1Q8NEM2 672 aa18.18■□□□□ 0.5
NUP50-219ENST00000497960 MKL1Q969V6 931 aa18.18■□□□□ 0.5
NUP50-219ENST00000497960 SHISA4Q96DD7 197 aa18.18■□□□□ 0.5
NUP50-219ENST00000497960 DEFB118Q96PH6 123 aa18.18■□□□□ 0.5
NUP50-219ENST00000497960 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.18■□□□□ 0.51e-8■■■■■ 27
NUP50-219ENST00000497960 HMX1Q9NP08 348 aaPredicted RBP18.18■□□□□ 0.5
NUP50-219ENST00000497960 PAK6Q9NQU5 681 aaPredicted RBP18.18■□□□□ 0.5
NUP50-219ENST00000497960 ANAPC4Q9UJX5 808 aa18.18■□□□□ 0.5
NUP50-219ENST00000497960 SYNPO2Q9UMS6 1093 aa18.18■□□□□ 0.5
NUP50-219ENST00000497960 RPTORQ8N122 1335 aa18.18■□□□□ 0.5
NUP50-219ENST00000497960 PLIN4Q96Q06 1357 aa18.17■□□□□ 0.5
NUP50-219ENST00000497960 TSPY2A6NKD2 308 aa18.17■□□□□ 0.5
NUP50-219ENST00000497960 STRNO43815 780 aa18.17■□□□□ 0.5
NUP50-219ENST00000497960 NDUFB10O96000 172 aa18.17■□□□□ 0.5
NUP50-219ENST00000497960 FGAP02671 866 aa18.17■□□□□ 0.5
NUP50-219ENST00000497960 TFRCP02786 760 aaKnown RBP18.17■□□□□ 0.5
NUP50-219ENST00000497960 PRPF38BQ5VTL8 546 aaKnown RBP18.17■□□□□ 0.5
NUP50-219ENST00000497960 ZNF589Q86UQ0 364 aaPredicted RBP18.17■□□□□ 0.5
NUP50-219ENST00000497960 MROH8Q9H579 483 aa18.17■□□□□ 0.5
NUP50-219ENST00000497960 FBXO28Q9NVF7 368 aa18.17■□□□□ 0.5
NUP50-219ENST00000497960 PPP1R9AQ9ULJ8 1098 aa18.17■□□□□ 0.5
NUP50-219ENST00000497960 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.17■□□□□ 0.5
NUP50-219ENST00000497960 GREB1LQ9C091 1923 aaPredicted RBP18.17■□□□□ 0.5
NUP50-219ENST00000497960 RANBP6O60518 1105 aaKnown RBP18.16■□□□□ 0.5
NUP50-219ENST00000497960 PRKAR2AP13861 404 aaKnown RBP18.16■□□□□ 0.5
NUP50-219ENST00000497960 ERCC3P19447 782 aa18.16■□□□□ 0.5
NUP50-219ENST00000497960 TRIM32Q13049 653 aa18.16■□□□□ 0.5
NUP50-219ENST00000497960 GRB14Q14449 540 aa18.16■□□□□ 0.5
NUP50-219ENST00000497960 SKAP1Q86WV1 359 aa18.16■□□□□ 0.5
NUP50-219ENST00000497960 NCAPG2Q86XI2 1143 aa18.16■□□□□ 0.5
NUP50-219ENST00000497960 NUP88Q99567 741 aaPredicted RBP18.16■□□□□ 0.5
NUP50-219ENST00000497960 SLF1Q9BQI6 1058 aa18.16■□□□□ 0.5
NUP50-219ENST00000497960 TOMM22Q9NS69 142 aa18.16■□□□□ 0.5
NUP50-219ENST00000497960 ADAMTS5Q9UNA0 930 aa18.16■□□□□ 0.5
NUP50-219ENST00000497960 GTF3C3Q9Y5Q9 886 aa18.16■□□□□ 0.5
NUP50-219ENST00000497960 PLXNB2O15031 1838 aa18.16■□□□□ 0.5
NUP50-219ENST00000497960 VWA5AO00534 786 aa18.15■□□□□ 0.5
NUP50-219ENST00000497960 ORC4O43929 436 aa18.15■□□□□ 0.5
NUP50-219ENST00000497960 SLC25A27O95847 323 aa18.15■□□□□ 0.5
NUP50-219ENST00000497960 TMEM132BQ14DG7 1078 aa18.15■□□□□ 0.5
NUP50-219ENST00000497960 TTC22Q5TAA0 569 aa18.15■□□□□ 0.5
NUP50-219ENST00000497960 MFSD14CQ5VZR4 134 aa18.15■□□□□ 0.5
NUP50-219ENST00000497960 CWC27Q6UX04 472 aaKnown RBP18.15■□□□□ 0.5
NUP50-219ENST00000497960 DPP9Q86TI2 863 aa18.15■□□□□ 0.5
NUP50-219ENST00000497960 LRRC47Q8N1G4 583 aaKnown RBP18.15■□□□□ 0.5
NUP50-219ENST00000497960 GMCL1P1Q8NEA9 526 aa18.15■□□□□ 0.5
NUP50-219ENST00000497960 INCENPQ9NQS7 918 aa18.15■□□□□ 0.5
NUP50-219ENST00000497960 ZMYM6O95789 1325 aa18.15■□□□□ 0.5
NUP50-219ENST00000497960 RLFQ13129 1914 aa18.15■□□□□ 0.5
NUP50-219ENST00000497960 FARP2O94887 1054 aaPredicted RBP18.14■□□□□ 0.49
NUP50-219ENST00000497960 HOXC6P09630 235 aa18.14■□□□□ 0.49
NUP50-219ENST00000497960 CCL14Q16627 93 aa18.14■□□□□ 0.49
NUP50-219ENST00000497960 MAP3K21Q5TCX8 1036 aa18.14■□□□□ 0.49
NUP50-219ENST00000497960 SLFN13Q68D06 897 aa18.14■□□□□ 0.49
NUP50-219ENST00000497960 SLC5A4Q9NY91 659 aa18.14■□□□□ 0.49
NUP50-219ENST00000497960 CTDP1Q9Y5B0 961 aaPredicted RBP18.14■□□□□ 0.49
NUP50-219ENST00000497960 ADORA2AP29274 412 aa18.13■□□□□ 0.49
NUP50-219ENST00000497960 COPB2P35606 906 aa18.13■□□□□ 0.49
NUP50-219ENST00000497960 STAT3P40763 770 aa18.13■□□□□ 0.49
NUP50-219ENST00000497960 CACNB2Q08289 660 aaPredicted RBP18.13■□□□□ 0.49
NUP50-219ENST00000497960 RRP12Q5JTH9 1297 aaKnown RBP18.13■□□□□ 0.49
NUP50-219ENST00000497960 RIOX2Q8IUF8 465 aa18.13■□□□□ 0.49
NUP50-219ENST00000497960 ABRAQ8N0Z2 381 aa18.13■□□□□ 0.49
NUP50-219ENST00000497960 PRPF38AQ8NAV1 312 aaKnown RBP18.13■□□□□ 0.49
NUP50-219ENST00000497960 CRISPLD2Q9H0B8 497 aa18.13■□□□□ 0.49
NUP50-219ENST00000497960 FEM1BQ9UK73 627 aa18.13■□□□□ 0.49
NUP50-219ENST00000497960 ISY1Q9ULR0 285 aaKnown RBP18.13■□□□□ 0.49
NUP50-219ENST00000497960 STX8Q9UNK0 236 aa18.13■□□□□ 0.49
NUP50-219ENST00000497960 BRCA2P51587 3418 aa18.12■□□□□ 0.49
NUP50-219ENST00000497960 ZBED4O75132 1171 aa18.12■□□□□ 0.49
NUP50-219ENST00000497960 FGRP09769 529 aa18.12■□□□□ 0.49
NUP50-219ENST00000497960 PCP11498 1178 aaKnown RBP18.12■□□□□ 0.49
NUP50-219ENST00000497960 FCER1AP12319 257 aa18.12■□□□□ 0.49
NUP50-219ENST00000497960 BMP3P12645 472 aa18.12■□□□□ 0.49
NUP50-219ENST00000497960 HAND2P61296 217 aa18.12■□□□□ 0.49
NUP50-219ENST00000497960 NPLOC4Q8TAT6 608 aa18.12■□□□□ 0.49
NUP50-219ENST00000497960 HTATIP2Q9BUP3 242 aa18.12■□□□□ 0.49
NUP50-219ENST00000497960 A0A0G2JMZ2 1700 aa18.12■□□□□ 0.49
NUP50-219ENST00000497960 TNRC18O15417 2968 aaPredicted RBP18.12■□□□□ 0.49
NUP50-219ENST00000497960 MYH4Q9Y623 1939 aa18.11■□□□□ 0.49
NUP50-219ENST00000497960 GSPT1P15170 499 aaKnown RBP18.11■□□□□ 0.49
NUP50-219ENST00000497960 MFSD6Q6ZSS7 791 aa18.11■□□□□ 0.49
NUP50-219ENST00000497960 UBE2Q1Q7Z7E8 422 aa18.11■□□□□ 0.49
NUP50-219ENST00000497960 KIFC2Q96AC6 838 aa18.11■□□□□ 0.49
NUP50-219ENST00000497960 TEX13BQ9BXU2 312 aa18.11■□□□□ 0.49
NUP50-219ENST00000497960 RNF41Q9H4P4 317 aaPredicted RBP18.11■□□□□ 0.49
NUP50-219ENST00000497960 IL17RBQ9NRM6 502 aa18.11■□□□□ 0.49
NUP50-219ENST00000497960 FLRT1Q9NZU1 646 aa18.11■□□□□ 0.49
NUP50-219ENST00000497960 ZNF214Q9UL59 606 aaPredicted RBP18.11■□□□□ 0.49
NUP50-219ENST00000497960 TACC3Q9Y6A5 838 aa18.11■□□□□ 0.49
NUP50-219ENST00000497960 NMT2O60551 498 aa18.1■□□□□ 0.49
NUP50-219ENST00000497960 SLC1A4P43007 532 aa18.1■□□□□ 0.49
NUP50-219ENST00000497960 KCTD2Q14681 263 aa18.1■□□□□ 0.49
NUP50-219ENST00000497960 AKNAD1Q5T1N1 836 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms