RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 ADM5C9JUS6 153 aa10.04□□□□□ -0.8
VPS45-210ENST00000497638 RPS12P25398 132 aaKnown RBP10.04□□□□□ -0.8
VPS45-210ENST00000497638 PRKAR2BP31323 418 aa10.04□□□□□ -0.8
VPS45-210ENST00000497638 GPLD1P80108 840 aa10.04□□□□□ -0.8
VPS45-210ENST00000497638 NOM1Q5C9Z4 860 aaKnown RBP10.04□□□□□ -0.8
VPS45-210ENST00000497638 FBXO46Q6PJ61 603 aaPredicted RBP10.04□□□□□ -0.8
VPS45-210ENST00000497638 DLK2Q6UY11 383 aa10.04□□□□□ -0.8
VPS45-210ENST00000497638 WFDC8Q8IUA0 241 aa10.04□□□□□ -0.8
VPS45-210ENST00000497638 ZNF34Q8IZ26 560 aa10.04□□□□□ -0.8
VPS45-210ENST00000497638 RGL4Q8IZJ4 473 aa10.04□□□□□ -0.8
VPS45-210ENST00000497638 TP53INP1Q96A56 240 aa10.04□□□□□ -0.8
VPS45-210ENST00000497638 PHACTR3Q96KR7 559 aa10.04□□□□□ -0.8
VPS45-210ENST00000497638 KIAA0100Q14667 2235 aaKnown RBP10.03□□□□□ -0.8
VPS45-210ENST00000497638 FKBP1BP68106 108 aa10.03□□□□□ -0.8
VPS45-210ENST00000497638 TBC1D10BQ4KMP7 808 aaPredicted RBP10.03□□□□□ -0.8
VPS45-210ENST00000497638 SLC10A5Q5PT55 438 aa10.03□□□□□ -0.8
VPS45-210ENST00000497638 TTLL7Q6ZT98 887 aa10.03□□□□□ -0.8
VPS45-210ENST00000497638 MCM10Q7L590 875 aa10.03□□□□□ -0.8
VPS45-210ENST00000497638 TMC4Q7Z404 712 aa10.03□□□□□ -0.8
VPS45-210ENST00000497638 RASAL3Q86YV0 1011 aa10.03□□□□□ -0.8
VPS45-210ENST00000497638 TREML1Q86YW5 311 aa10.03□□□□□ -0.8
VPS45-210ENST00000497638 NGEFQ8N5V2 710 aa10.03□□□□□ -0.8
VPS45-210ENST00000497638 ZNF296Q8WUU4 475 aaPredicted RBP10.03□□□□□ -0.8
VPS45-210ENST00000497638 SMG9Q9H0W8 520 aaKnown RBP10.03□□□□□ -0.8
VPS45-210ENST00000497638 DUOX1Q9NRD9 1551 aa10.03□□□□□ -0.8
VPS45-210ENST00000497638 PAPPA2Q9BXP8 1791 aa10.03□□□□□ -0.8
VPS45-210ENST00000497638 ANKRD36CQ5JPF3 1778 aa10.02□□□□□ -0.81
VPS45-210ENST00000497638 PSMD14O00487 310 aa10.02□□□□□ -0.81
VPS45-210ENST00000497638 OPLAHO14841 1288 aa10.02□□□□□ -0.81
VPS45-210ENST00000497638 HTATSF1O43719 755 aaKnown RBP10.02□□□□□ -0.81
VPS45-210ENST00000497638 XYLBO75191 536 aa10.02□□□□□ -0.81
VPS45-210ENST00000497638 H2AFB1P0C5Y9 115 aa10.02□□□□□ -0.81
VPS45-210ENST00000497638 H2AFB2P0C5Z0 115 aa10.02□□□□□ -0.81
VPS45-210ENST00000497638 EIF2AK2P19525 551 aaKnown RBP10.02□□□□□ -0.81
VPS45-210ENST00000497638 TAF7Q15545 349 aaPredicted RBP10.02□□□□□ -0.81
VPS45-210ENST00000497638 DTWD1Q8N5C7 304 aa10.02□□□□□ -0.81
VPS45-210ENST00000497638 PRIMPOLQ96LW4 560 aa10.02□□□□□ -0.81
VPS45-210ENST00000497638 UTP14AQ9BVJ6 771 aaKnown RBP10.02□□□□□ -0.81
VPS45-210ENST00000497638 LRRC37AA6NMS7 1700 aa10.02□□□□□ -0.81
VPS45-210ENST00000497638 DDX60Q8IY21 1712 aaKnown RBP10.02□□□□□ -0.81
VPS45-210ENST00000497638 EGFRP00533 1210 aa10.01□□□□□ -0.81
VPS45-210ENST00000497638 FXR1P51114 621 aaKnown RBP eCLIP10.01□□□□□ -0.81
VPS45-210ENST00000497638 PLAURQ03405 335 aa10.01□□□□□ -0.81
VPS45-210ENST00000497638 FKBP5Q13451 457 aaPredicted RBP10.01□□□□□ -0.81
VPS45-210ENST00000497638 GRAPQ13588 217 aa10.01□□□□□ -0.81
VPS45-210ENST00000497638 GRIK5Q16478 980 aa10.01□□□□□ -0.81
VPS45-210ENST00000497638 KIF4BQ2VIQ3 1234 aa10.01□□□□□ -0.81
VPS45-210ENST00000497638 CC2D1BQ5T0F9 858 aaKnown RBP10.01□□□□□ -0.81
VPS45-210ENST00000497638 DDX46Q7L014 1031 aaKnown RBP10.01□□□□□ -0.81
VPS45-210ENST00000497638 FBXO11Q86XK2 927 aa10.01□□□□□ -0.81
VPS45-210ENST00000497638 GRAPLQ8TC17 118 aaPredicted RBP10.01□□□□□ -0.81
VPS45-210ENST00000497638 CDCA5Q96FF9 252 aa10.01□□□□□ -0.81
VPS45-210ENST00000497638 TLR7Q9NYK1 1049 aaKnown RBP10.01□□□□□ -0.81
VPS45-210ENST00000497638 GGA3Q9NZ52 723 aa10.01□□□□□ -0.81
VPS45-210ENST00000497638 RRP7AQ9Y3A4 280 aaKnown RBP10.01□□□□□ -0.81
VPS45-210ENST00000497638 LAMB2P55268 1798 aa10.01□□□□□ -0.81
VPS45-210ENST00000497638 CEP290O15078 2479 aa10□□□□□ -0.81
VPS45-210ENST00000497638 TRIOBPQ9H2D6 2365 aa10□□□□□ -0.81
VPS45-210ENST00000497638 HTTP42858 3142 aa10□□□□□ -0.81
VPS45-210ENST00000497638 PRMT3O60678 531 aa10□□□□□ -0.81
VPS45-210ENST00000497638 PSAPP07602 524 aa10□□□□□ -0.81
VPS45-210ENST00000497638 NRLP54845 237 aa10□□□□□ -0.81
VPS45-210ENST00000497638 COX20Q5RI15 118 aa10□□□□□ -0.81
VPS45-210ENST00000497638 PNISRQ8TF01 805 aaKnown RBP10□□□□□ -0.81
VPS45-210ENST00000497638 TTC9Q92623 222 aa10□□□□□ -0.81
VPS45-210ENST00000497638 KDM3BQ7LBC6 1761 aa10□□□□□ -0.81
VPS45-210ENST00000497638 TBC1D8O95759 1140 aa9.99□□□□□ -0.81
VPS45-210ENST00000497638 MYL6BP14649 208 aa9.99□□□□□ -0.81
VPS45-210ENST00000497638 DCTN1Q14203 1278 aa9.99□□□□□ -0.81
VPS45-210ENST00000497638 SWI5Q1ZZU3 235 aa9.99□□□□□ -0.81
VPS45-210ENST00000497638 FOXD4L6Q3SYB3 417 aaPredicted RBP9.99□□□□□ -0.81
VPS45-210ENST00000497638 INTS3Q68E01 1043 aaKnown RBP9.99□□□□□ -0.81
VPS45-210ENST00000497638 FOXD4L3Q6VB84 417 aaPredicted RBP9.99□□□□□ -0.81
VPS45-210ENST00000497638 CFAP53Q96M91 514 aa9.99□□□□□ -0.81
VPS45-210ENST00000497638 DBNDD1Q9H9R9 158 aa9.99□□□□□ -0.81
VPS45-210ENST00000497638 NUDCQ9Y266 331 aa9.99□□□□□ -0.81
VPS45-210ENST00000497638 ZNF609O15014 1411 aa9.99□□□□□ -0.81
VPS45-210ENST00000497638 RBBP6Q7Z6E9 1792 aaKnown RBP9.98□□□□□ -0.81
VPS45-210ENST00000497638 FKTNO75072 461 aa9.98□□□□□ -0.81
VPS45-210ENST00000497638 GHRHP01286 108 aa9.98□□□□□ -0.81
VPS45-210ENST00000497638 CLSPNQ9HAW4 1339 aa9.98□□□□□ -0.81
VPS45-210ENST00000497638 RTL9Q8NET4 1388 aa9.98□□□□□ -0.81
VPS45-210ENST00000497638 J3QW42 95 aa9.97□□□□□ -0.81
VPS45-210ENST00000497638 ECE2O60344 883 aa9.97□□□□□ -0.81
VPS45-210ENST00000497638 IREB2P48200 963 aaKnown RBP9.97□□□□□ -0.81
VPS45-210ENST00000497638 TM4SF4P48230 202 aa9.97□□□□□ -0.81
VPS45-210ENST00000497638 EIF4A1P60842 406 aaKnown RBP9.97□□□□□ -0.81
VPS45-210ENST00000497638 SREBF2Q12772 1141 aa9.97□□□□□ -0.81
VPS45-210ENST00000497638 HSP90AB3PQ58FF7 597 aa9.97□□□□□ -0.81
VPS45-210ENST00000497638 IGF2-ASQ6U949 168 aa9.97□□□□□ -0.81
VPS45-210ENST00000497638 WFDC12Q8WWY7 111 aa9.97□□□□□ -0.81
VPS45-210ENST00000497638 EYA3Q99504 573 aa9.97□□□□□ -0.81
VPS45-210ENST00000497638 RBSNQ9H1K0 784 aa9.97□□□□□ -0.81
VPS45-210ENST00000497638 MIS18AQ9NYP9 233 aa9.97□□□□□ -0.81
VPS45-210ENST00000497638 PITPNM2Q9BZ72 1349 aa9.97□□□□□ -0.81
VPS45-210ENST00000497638 CUL9Q8IWT3 2517 aa9.97□□□□□ -0.81
VPS45-210ENST00000497638 VIL1P09327 827 aaKnown RBP9.96□□□□□ -0.82
VPS45-210ENST00000497638 U2AF1L5P0DN76 240 aaPredicted RBP9.96□□□□□ -0.82
VPS45-210ENST00000497638 HCLS1P14317 486 aaPredicted RBP9.96□□□□□ -0.82
VPS45-210ENST00000497638 BRD2P25440 801 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms