RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.02■■□□□ 1.28
SCAMP3-209ENST00000497470 HPS5Q9UPZ3 1129 aa23.02■■□□□ 1.28
SCAMP3-209ENST00000497470 BMP3P12645 472 aa23.01■■□□□ 1.27
SCAMP3-209ENST00000497470 METAP2P50579 478 aaKnown RBP eCLIP23.01■■□□□ 1.27
SCAMP3-209ENST00000497470 CHURC1Q8WUH1 139 aa23.01■■□□□ 1.27
SCAMP3-209ENST00000497470 CNKSR2Q8WXI2 1034 aa23.01■■□□□ 1.27
SCAMP3-209ENST00000497470 SLKQ9H2G2 1235 aaPredicted RBP23.01■■□□□ 1.27
SCAMP3-209ENST00000497470 FEM1BQ9UK73 627 aa23.01■■□□□ 1.27
SCAMP3-209ENST00000497470 LOC285556D6RIA3 1793 aa23.01■■□□□ 1.27
SCAMP3-209ENST00000497470 GOLGA8BA8MQT2 603 aa23■■□□□ 1.27
SCAMP3-209ENST00000497470 VCAM1P19320 739 aa23■■□□□ 1.27
SCAMP3-209ENST00000497470 HMGCS2P54868 508 aa23■■□□□ 1.27
SCAMP3-209ENST00000497470 MOGSQ13724 837 aa23■■□□□ 1.27
SCAMP3-209ENST00000497470 ME3Q16798 604 aa23■■□□□ 1.27
SCAMP3-209ENST00000497470 CPLX2Q6PUV4 134 aaKnown RBP23■■□□□ 1.27
SCAMP3-209ENST00000497470 CCDC84Q86UT8 332 aaPredicted RBP23■■□□□ 1.27
SCAMP3-209ENST00000497470 LLPHQ9BRT6 129 aaKnown RBP23■■□□□ 1.27
SCAMP3-209ENST00000497470 RBM27Q9P2N5 1060 aaKnown RBP23■■□□□ 1.27
SCAMP3-209ENST00000497470 MAD2L2Q9UI95 211 aa23■■□□□ 1.27
SCAMP3-209ENST00000497470 AGTPBP1Q9UPW5 1226 aa23■■□□□ 1.27
SCAMP3-209ENST00000497470 USP17L15C9J2P7 530 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 USP17L13C9JLJ4 530 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 USP17L11C9JVI0 530 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 USP17L18D6R9N7 530 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 USP17L22D6RA61 530 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 USP17L17D6RBQ6 530 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 USP17L19D6RCP7 530 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 USP17L20D6RJB6 530 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 K7ELQ4 463 aaPredicted RBP22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 C1QTNF8P60827 252 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 USP17L24Q0WX57 530 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 RTN1Q16799 776 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 LBX2Q6XYB7 198 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 ANKRD23Q86SG2 305 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 GTF3C6Q969F1 213 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 SPZ1Q9BXG8 430 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 FAM217BQ9NTX9 383 aaPredicted RBP22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 PNMA2Q9UL42 364 aa22.99■■□□□ 1.27
SCAMP3-209ENST00000497470 GOLGA8AA7E2F4 631 aa22.98■■□□□ 1.27
SCAMP3-209ENST00000497470 MAP2K2P36507 400 aa22.98■■□□□ 1.27
SCAMP3-209ENST00000497470 TM4SF4P48230 202 aa22.98■■□□□ 1.27
SCAMP3-209ENST00000497470 SREBF2Q12772 1141 aa22.98■■□□□ 1.27
SCAMP3-209ENST00000497470 CUL4AQ13619 759 aa22.98■■□□□ 1.27
SCAMP3-209ENST00000497470 CATSPERGQ6ZRH7 1159 aa22.98■■□□□ 1.27
SCAMP3-209ENST00000497470 MICU3Q86XE3 530 aa22.98■■□□□ 1.27
SCAMP3-209ENST00000497470 GTF3C2Q8WUA4 911 aaPredicted RBP22.98■■□□□ 1.27
SCAMP3-209ENST00000497470 TMX3Q96JJ7 454 aa22.98■■□□□ 1.27
SCAMP3-209ENST00000497470 RIOX1Q9H6W3 641 aa22.98■■□□□ 1.27
SCAMP3-209ENST00000497470 HOXC10Q9NYD6 342 aa22.98■■□□□ 1.27
SCAMP3-209ENST00000497470 CDKL5O76039 1030 aa22.97■■□□□ 1.27
SCAMP3-209ENST00000497470 CD2BP2O95400 341 aaKnown RBP22.97■■□□□ 1.27
SCAMP3-209ENST00000497470 HSPA6P17066 643 aa22.97■■□□□ 1.27
SCAMP3-209ENST00000497470 IFNAR1P17181 557 aa22.97■■□□□ 1.27
SCAMP3-209ENST00000497470 STAT2P52630 851 aa22.97■■□□□ 1.27
SCAMP3-209ENST00000497470 BECN1Q14457 450 aa22.97■■□□□ 1.27
SCAMP3-209ENST00000497470 KIAA1755Q5JYT7 1200 aa22.97■■□□□ 1.27
SCAMP3-209ENST00000497470 HSCBQ8IWL3 235 aa22.97■■□□□ 1.27
SCAMP3-209ENST00000497470 PRPF38AQ8NAV1 312 aaKnown RBP22.97■■□□□ 1.27
SCAMP3-209ENST00000497470 NUP133Q8WUM0 1156 aa22.97■■□□□ 1.27
SCAMP3-209ENST00000497470 INTS4Q96HW7 963 aaKnown RBP22.97■■□□□ 1.27
SCAMP3-209ENST00000497470 TSHZ2Q9NRE2 1034 aa22.97■■□□□ 1.27
SCAMP3-209ENST00000497470 KLRF2D3W0D1 207 aa22.96■■□□□ 1.27
SCAMP3-209ENST00000497470 NTRK3Q16288 839 aa22.96■■□□□ 1.27
SCAMP3-209ENST00000497470 OTUD7BQ6GQQ9 843 aa22.96■■□□□ 1.27
SCAMP3-209ENST00000497470 GPAT2Q6NUI2 795 aa22.96■■□□□ 1.27
SCAMP3-209ENST00000497470 TMTC3Q6ZXV5 915 aa22.96■■□□□ 1.27
SCAMP3-209ENST00000497470 FAM177A1Q8N128 213 aaPredicted RBP22.96■■□□□ 1.27
SCAMP3-209ENST00000497470 RGS22Q8NE09 1264 aa22.96■■□□□ 1.27
SCAMP3-209ENST00000497470 PNMA3Q9UL41 463 aa22.96■■□□□ 1.27
SCAMP3-209ENST00000497470 ADAMTS5Q9UNA0 930 aa22.96■■□□□ 1.27
SCAMP3-209ENST00000497470 CCL15-CCL14A0A0B4J2E2 113 aa22.95■■□□□ 1.26
SCAMP3-209ENST00000497470 FUT2Q10981 343 aa22.95■■□□□ 1.26
SCAMP3-209ENST00000497470 SCRN1Q12765 414 aa22.95■■□□□ 1.26
SCAMP3-209ENST00000497470 TRAF1Q13077 416 aa22.95■■□□□ 1.26
SCAMP3-209ENST00000497470 COG2Q14746 738 aa22.95■■□□□ 1.26
SCAMP3-209ENST00000497470 CCL15Q16663 113 aa22.95■■□□□ 1.26
SCAMP3-209ENST00000497470 TEX2Q8IWB9 1127 aa22.95■■□□□ 1.26
SCAMP3-209ENST00000497470 BRI3BPQ8WY22 251 aa22.95■■□□□ 1.26
SCAMP3-209ENST00000497470 MTMR8Q96EF0 704 aa22.95■■□□□ 1.26
SCAMP3-209ENST00000497470 CAPNS2Q96L46 248 aa22.95■■□□□ 1.26
SCAMP3-209ENST00000497470 RPAP3Q9H6T3 665 aaPredicted RBP22.95■■□□□ 1.26
SCAMP3-209ENST00000497470 CDC27P30260 824 aa22.94■■□□□ 1.26
SCAMP3-209ENST00000497470 CCDC96Q2M329 555 aa22.94■■□□□ 1.26
SCAMP3-209ENST00000497470 FAM83BQ5T0W9 1011 aa22.94■■□□□ 1.26
SCAMP3-209ENST00000497470 MB21D1Q8N884 522 aa22.94■■□□□ 1.26
SCAMP3-209ENST00000497470 MYL10Q9BUA6 226 aa22.94■■□□□ 1.26
SCAMP3-209ENST00000497470 RNF26Q9BY78 433 aaPredicted RBP22.94■■□□□ 1.26
SCAMP3-209ENST00000497470 MAF1Q9H063 256 aa22.94■■□□□ 1.26
SCAMP3-209ENST00000497470 TMEM232C9JQI7 657 aa22.93■■□□□ 1.26
SCAMP3-209ENST00000497470 CPLX1O14810 134 aa22.93■■□□□ 1.26
SCAMP3-209ENST00000497470 ALDH1A1P00352 501 aa22.93■■□□□ 1.26
SCAMP3-209ENST00000497470 OSBPP22059 807 aa22.93■■□□□ 1.26
SCAMP3-209ENST00000497470 ANP32AP39687 249 aaKnown RBP22.93■■□□□ 1.26
SCAMP3-209ENST00000497470 ZYXQ15942 572 aaKnown RBP22.93■■□□□ 1.26
SCAMP3-209ENST00000497470 SPICE1Q8N0Z3 855 aa22.93■■□□□ 1.26
SCAMP3-209ENST00000497470 SLF1Q9BQI6 1058 aa22.93■■□□□ 1.26
SCAMP3-209ENST00000497470 PPP1R9AQ9ULJ8 1098 aa22.93■■□□□ 1.26
SCAMP3-209ENST00000497470 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.93■■□□□ 1.26
SCAMP3-209ENST00000497470 STK36Q9NRP7 1315 aa22.92■■□□□ 1.26
SCAMP3-209ENST00000497470 ATP2A1O14983 1001 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms