RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 MAPK1P28482 360 aa8.02□□□□□ -1.13
HOXA9-206ENST00000497089 RTN1Q16799 776 aa8.02□□□□□ -1.13
HOXA9-206ENST00000497089 KIF4BQ2VIQ3 1234 aa8.02□□□□□ -1.13
HOXA9-206ENST00000497089 DEFB115Q30KQ5 88 aa8.02□□□□□ -1.13
HOXA9-206ENST00000497089 RABL6Q3YEC7 729 aaPredicted RBP8.02□□□□□ -1.13
HOXA9-206ENST00000497089 TBC1D10BQ4KMP7 808 aaPredicted RBP8.02□□□□□ -1.13
HOXA9-206ENST00000497089 DACT2Q5SW24 774 aa8.02□□□□□ -1.13
HOXA9-206ENST00000497089 SH3PXD2AQ5TCZ1 1133 aa8.02□□□□□ -1.13
HOXA9-206ENST00000497089 STRIP1Q5VSL9 837 aa8.02□□□□□ -1.13
HOXA9-206ENST00000497089 C1orf53Q5VUE5 145 aa8.02□□□□□ -1.13
HOXA9-206ENST00000497089 ALKBH2Q6NS38 261 aa8.02□□□□□ -1.13
HOXA9-206ENST00000497089 SLC4A10Q6U841 1118 aa8.02□□□□□ -1.13
HOXA9-206ENST00000497089 SAPCD2Q86UD0 394 aa8.02□□□□□ -1.13
HOXA9-206ENST00000497089 IPO4Q8TEX9 1081 aaKnown RBP8.02□□□□□ -1.13
HOXA9-206ENST00000497089 FOXD4L4Q8WXT5 416 aaPredicted RBP8.02□□□□□ -1.13
HOXA9-206ENST00000497089 SUCLG2Q96I99 432 aa8.02□□□□□ -1.13
HOXA9-206ENST00000497089 PHACTR1Q9C0D0 580 aa8.02□□□□□ -1.13
HOXA9-206ENST00000497089 PITPNM2Q9BZ72 1349 aa8.01□□□□□ -1.13
HOXA9-206ENST00000497089 WDR33Q9C0J8 1336 aaKnown RBP8.01□□□□□ -1.13
HOXA9-206ENST00000497089 CELF2O95319 508 aaKnown RBP8.01□□□□□ -1.13
HOXA9-206ENST00000497089 F11P03951 625 aa8.01□□□□□ -1.13
HOXA9-206ENST00000497089 NPR3P17342 541 aa8.01□□□□□ -1.13
HOXA9-206ENST00000497089 MPSTP25325 297 aa8.01□□□□□ -1.13
HOXA9-206ENST00000497089 KLRK1P26718 216 aa8.01□□□□□ -1.13
HOXA9-206ENST00000497089 CCDC57Q2TAC2 916 aa8.01□□□□□ -1.13
HOXA9-206ENST00000497089 C11orf91Q3C1V1 193 aa8.01□□□□□ -1.13
HOXA9-206ENST00000497089 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.01□□□□□ -1.13
HOXA9-206ENST00000497089 LDHAL6AQ6ZMR3 332 aa8.01□□□□□ -1.13
HOXA9-206ENST00000497089 KRT26Q7Z3Y9 468 aa8.01□□□□□ -1.13
HOXA9-206ENST00000497089 NPAS3Q8IXF0 933 aa8.01□□□□□ -1.13
HOXA9-206ENST00000497089 USP44Q9H0E7 712 aa8.01□□□□□ -1.13
HOXA9-206ENST00000497089 ZDHHC3Q9NYG2 299 aa8.01□□□□□ -1.13
HOXA9-206ENST00000497089 DCTN4Q9UJW0 460 aa8.01□□□□□ -1.13
HOXA9-206ENST00000497089 ABT1Q9ULW3 272 aaKnown RBP8.01□□□□□ -1.13
HOXA9-206ENST00000497089 IL1R1P14778 569 aa8□□□□□ -1.13
HOXA9-206ENST00000497089 MSX1P28360 303 aa8□□□□□ -1.13
HOXA9-206ENST00000497089 ECE1P42892 770 aa8□□□□□ -1.13
HOXA9-206ENST00000497089 KCNJ4P48050 445 aa8□□□□□ -1.13
HOXA9-206ENST00000497089 NOM1Q5C9Z4 860 aaKnown RBP8□□□□□ -1.13
HOXA9-206ENST00000497089 TAF3Q5VWG9 929 aa8□□□□□ -1.13
HOXA9-206ENST00000497089 USP48Q86UV5 1035 aa8□□□□□ -1.13
HOXA9-206ENST00000497089 DCPSQ96C86 337 aaKnown RBP8□□□□□ -1.13
HOXA9-206ENST00000497089 TRIM44Q96DX7 344 aaPredicted RBP8□□□□□ -1.13
HOXA9-206ENST00000497089 ZBED3Q96IU2 234 aaPredicted RBP8□□□□□ -1.13
HOXA9-206ENST00000497089 CAPNS2Q96L46 248 aa8□□□□□ -1.13
HOXA9-206ENST00000497089 GAS2L1Q99501 681 aaPredicted RBP8□□□□□ -1.13
HOXA9-206ENST00000497089 CD209Q9NNX6 404 aa8□□□□□ -1.13
HOXA9-206ENST00000497089 MYOZ2Q9NPC6 264 aa8□□□□□ -1.13
HOXA9-206ENST00000497089 LRFN2Q9ULH4 789 aa8□□□□□ -1.13
HOXA9-206ENST00000497089 RIPOR2Q9Y4F9 1068 aa8□□□□□ -1.13
HOXA9-206ENST00000497089 NDUFB5O43674 189 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 TAF5LO75529 589 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 ATP4AP20648 1035 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 MAP2K2P36507 400 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 TXLNAP40222 546 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 FKBP1AP62942 108 aaKnown RBP7.99□□□□□ -1.13
HOXA9-206ENST00000497089 ARHGAP4P98171 946 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 MAP2K1Q02750 393 aaPredicted RBP7.99□□□□□ -1.13
HOXA9-206ENST00000497089 DGKZQ13574 1117 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 UBE4AQ14139 1066 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 HIF1AQ16665 826 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 COL13A1Q5TAT6 717 aaPredicted RBP7.99□□□□□ -1.13
HOXA9-206ENST00000497089 TTLL5Q6EMB2 1281 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 ZSCAN29Q8IWY8 852 aaPredicted RBP7.99□□□□□ -1.13
HOXA9-206ENST00000497089 ANKRD44Q8N8A2 993 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 RHPN1Q8TCX5 695 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 ARHGAP45Q92619 1136 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 BICC1Q9H694 974 aaKnown RBP7.99□□□□□ -1.13
HOXA9-206ENST00000497089 GPAMQ9HCL2 828 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 SMC4Q9NTJ3 1288 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 GGA3Q9NZ52 723 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 ASTN2O75129 1339 aaPredicted RBP7.99□□□□□ -1.13
HOXA9-206ENST00000497089 MROH5Q6ZUA9 1318 aa7.99□□□□□ -1.13
HOXA9-206ENST00000497089 ADM5C9JUS6 153 aa7.98□□□□□ -1.13
HOXA9-206ENST00000497089 SNAP23O00161 211 aa7.98□□□□□ -1.13
HOXA9-206ENST00000497089 TNFRSF10BO14763 440 aa7.98□□□□□ -1.13
HOXA9-206ENST00000497089 RGS3P49796 1198 aa7.98□□□□□ -1.13
HOXA9-206ENST00000497089 RARSP54136 660 aaKnown RBP7.98□□□□□ -1.13
HOXA9-206ENST00000497089 ECM1Q16610 540 aa7.98□□□□□ -1.13
HOXA9-206ENST00000497089 ANGEL2Q5VTE6 544 aaKnown RBP7.98□□□□□ -1.13
HOXA9-206ENST00000497089 ZNF804AQ7Z570 1209 aa7.98□□□□□ -1.13
HOXA9-206ENST00000497089 IFT43Q96FT9 208 aa7.98□□□□□ -1.13
HOXA9-206ENST00000497089 MXD3Q9BW11 206 aa7.98□□□□□ -1.13
HOXA9-206ENST00000497089 API5Q9BZZ5 524 aaKnown RBP7.98□□□□□ -1.13
HOXA9-206ENST00000497089 GBA2Q9HCG7 927 aaPredicted RBP7.98□□□□□ -1.13
HOXA9-206ENST00000497089 NEUROD4Q9HD90 331 aa7.98□□□□□ -1.13
HOXA9-206ENST00000497089 PRDM10Q9NQV6 1147 aa7.98□□□□□ -1.13
HOXA9-206ENST00000497089 CNNM1Q9NRU3 951 aa7.98□□□□□ -1.13
HOXA9-206ENST00000497089 CUEDC1Q9NWM3 386 aaPredicted RBP7.98□□□□□ -1.13
HOXA9-206ENST00000497089 NAP1L2Q9ULW6 460 aaPredicted RBP7.98□□□□□ -1.13
HOXA9-206ENST00000497089 FAM205AQ6ZU69 1335 aa7.98□□□□□ -1.13
HOXA9-206ENST00000497089 KIF16BQ96L93 1317 aa7.98□□□□□ -1.13
HOXA9-206ENST00000497089 ECM29Q5VYK3 1845 aa7.97□□□□□ -1.13
HOXA9-206ENST00000497089 WNT10BO00744 389 aa7.97□□□□□ -1.13
HOXA9-206ENST00000497089 TERTO14746 1132 aaKnown RBP7.97□□□□□ -1.13
HOXA9-206ENST00000497089 FOXN1O15353 648 aa7.97□□□□□ -1.13
HOXA9-206ENST00000497089 SASH1O94885 1247 aa7.97□□□□□ -1.13
HOXA9-206ENST00000497089 XRCC6P12956 609 aaKnown RBP eCLIP7.97□□□□□ -1.13
HOXA9-206ENST00000497089 EIF1AXP47813 144 aaKnown RBP7.97□□□□□ -1.13
HOXA9-206ENST00000497089 CTCFP49711 727 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms