RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 EIF5P55010 431 aaKnown RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 U2AF1Q01081 240 aaKnown RBP eCLIP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 PLEKHG6Q3KR16 790 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 ANKRD34AQ69YU3 496 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 CCDC70Q6NSX1 233 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 LLGL2Q6P1M3 1020 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 FBF1Q8TES7 1133 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 FRAT1Q92837 279 aaPredicted RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 ZNF396Q96N95 335 aaPredicted RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 CDC5LQ99459 802 aaKnown RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 MPHOSPH6Q99547 160 aaKnown RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 LRRC27Q9C0I9 530 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 SUGCTQ9HAC7 445 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 IFT122Q9HBG6 1241 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 SPC25Q9HBM1 224 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 CRIM1Q9NZV1 1036 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 WASH4PA8MWX3 477 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 TIMM44O43615 452 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 NAT2P11245 290 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 ATP2B1P20020 1258 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 ATICP31939 592 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 E2F5Q15329 346 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 CCDC73Q6ZRK6 1079 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 FILIP1Q7Z7B0 1213 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 PCGF5Q86SE9 256 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 IQCF2Q8IXL9 164 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 JDP2Q8WYK2 163 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 GATA6Q92908 595 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 WNT8BQ93098 351 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 TIGD1Q96MW7 591 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 NAP1L4Q99733 375 aaKnown RBP3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 ACSS3Q9H6R3 686 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 PRDM7Q9NQW5 492 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 UBP1Q9NZI7 540 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 SFMBT1Q9UHJ3 866 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 RAXQ9Y2V3 346 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 KIF3AQ9Y496 699 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 UPK3BL1B0FP48 263 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 UPK3BL2E5RIL1 263 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 H0YHG0 523 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 TULP2O00295 520 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 CCDC175P0C221 793 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 ARNTP27540 789 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 TNNT3P45378 269 aaPredicted RBP3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 RBM5P52756 815 aaKnown RBP eCLIP3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 SARNPP82979 210 aaKnown RBP3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 SAFB2Q14151 953 aaKnown RBP eCLIP3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 BMS1Q14692 1282 aaKnown RBP3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 AMOTQ4VCS5 1084 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 CCDC92Q53HC0 331 aaPredicted RBP3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 CC2D1AQ6P1N0 951 aaPredicted RBP3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 ZNF574Q6ZN55 896 aaPredicted RBP3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 TMC4Q7Z404 712 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 TTC30AQ86WT1 665 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 SMYD4Q8IYR2 804 aaPredicted RBP3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 NEUROD6Q96NK8 337 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 POLR3CQ9BUI4 534 aaPredicted RBP3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 TEX13AQ9BXU3 409 aaPredicted RBP3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 CEP41Q9BYV8 373 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 SOX17Q9H6I2 414 aaPredicted RBP3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 SCINQ9Y6U3 715 aa3.68□□□□□ -1.82
SNRNP48-202ENST00000496946 BICRAQ9NZM4 1560 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 KRTAP4-8A0A0G2JLE6 195 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 PRC1O43663 620 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 F13A1P00488 732 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 NME2P22392 152 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 MAGEA8P43361 318 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 TRPC1P48995 793 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 PPP2R3AQ06190 1150 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 MLECQ14165 292 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 FBXL19Q6PCT2 694 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 CATIPQ7Z7H3 387 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 PLD6Q8N2A8 252 aaKnown RBP3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 SAMD3Q8N6K7 520 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 SMG8Q8ND04 991 aaKnown RBP3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 DCAF11Q8TEB1 546 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 SLC26A8Q96RN1 970 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 LZTS2Q9BRK4 669 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 RMI1Q9H9A7 625 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 SRA1Q9HD15 236 aaKnown RBP3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 PCDH12Q9NPG4 1184 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 PICK1Q9NRD5 415 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 IFT57Q9NWB7 429 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 DIS3Q9Y2L1 958 aaKnown RBP3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 NISCHQ9Y2I1 1504 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 RIMBP3CA6NJZ7 1639 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 RIMBP3BA6NNM3 1639 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 RIMBP3Q9UFD9 1639 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 CCDC196A0A1B0GTZ2 297 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 ANKRD18BA2A2Z9 1011 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 FAM87AP0C7U9 286 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 LIG3P49916 1009 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 TRDNQ13061 729 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 DRC7Q8IY82 874 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 PAF1Q8N7H5 531 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 GOLM1Q8NBJ4 401 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 SMCR8Q8TEV9 937 aaPredicted RBP3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 CRELD1Q96HD1 420 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 AGAP3Q96P47 875 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 NOL10Q9BSC4 688 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms