RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 A0A1W2PQH9 124 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 SIGLEC6O43699 453 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 ITGB5P18084 799 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 EGR3Q06889 387 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 TDRD10Q5VZ19 366 aaKnown RBP7.87□□□□□ -1.15
SNX13-211ENST00000496855 CCDC144CPQ8IYA2 1237 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 FAM169BQ8N8A8 192 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 ANAPC16Q96DE5 110 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 SLAMF8Q9P0V8 285 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 FBXL21Q9UKT6 434 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 PCDHA11Q9Y5I1 949 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 PRAMEF1O95521 474 aa7.86□□□□□ -1.15
SNX13-211ENST00000496855 CASP7P55210 303 aa7.86□□□□□ -1.15
SNX13-211ENST00000496855 ARID5AQ03989 594 aa7.86□□□□□ -1.15
SNX13-211ENST00000496855 PPP2R5EQ16537 467 aa7.86□□□□□ -1.15
SNX13-211ENST00000496855 BBS9Q3SYG4 887 aa7.86□□□□□ -1.15
SNX13-211ENST00000496855 ATG4DQ86TL0 474 aaPredicted RBP7.86□□□□□ -1.15
SNX13-211ENST00000496855 C7orf61Q8IZ16 206 aa7.86□□□□□ -1.15
SNX13-211ENST00000496855 ZNF655Q8N720 491 aaPredicted RBP7.86□□□□□ -1.15
SNX13-211ENST00000496855 SHOXO15266 292 aa7.85□□□□□ -1.15
SNX13-211ENST00000496855 SSBP05455 408 aaKnown RBP eCLIP7.85□□□□□ -1.15
SNX13-211ENST00000496855 ANKRD39Q53RE8 183 aa7.85□□□□□ -1.15
SNX13-211ENST00000496855 AXDND1Q5T1B0 1012 aaPredicted RBP7.85□□□□□ -1.15
SNX13-211ENST00000496855 SLC43A3Q8NBI5 491 aa7.85□□□□□ -1.15
SNX13-211ENST00000496855 TCTN2Q96GX1 697 aa7.85□□□□□ -1.15
SNX13-211ENST00000496855 CCDC120Q96HB5 630 aa7.85□□□□□ -1.15
SNX13-211ENST00000496855 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.85□□□□□ -1.15
SNX13-211ENST00000496855 PHAXQ9H814 394 aaKnown RBP7.85□□□□□ -1.15
SNX13-211ENST00000496855 PRR13Q9NZ81 148 aa7.85□□□□□ -1.15
SNX13-211ENST00000496855 CTNND2Q9UQB3 1225 aa7.85□□□□□ -1.15
SNX13-211ENST00000496855 DNAJC25-GNG10A0A024R161 153 aa7.84□□□□□ -1.15
SNX13-211ENST00000496855 BIN1O00499 593 aa7.84□□□□□ -1.15
SNX13-211ENST00000496855 PAPLNO95428 1278 aa7.84□□□□□ -1.15
SNX13-211ENST00000496855 TP53P04637 393 aaPredicted RBP7.84□□□□□ -1.15
SNX13-211ENST00000496855 FGRP09769 529 aa7.84□□□□□ -1.15
SNX13-211ENST00000496855 JUNBP17275 347 aaPredicted RBP7.84□□□□□ -1.15
SNX13-211ENST00000496855 RALGPS1Q5JS13 557 aa7.84□□□□□ -1.15
SNX13-211ENST00000496855 DCAF15Q66K64 600 aa7.84□□□□□ -1.15
SNX13-211ENST00000496855 FLAD1Q8NFF5 587 aa7.84□□□□□ -1.15
SNX13-211ENST00000496855 CHST7Q9NS84 486 aa7.84□□□□□ -1.15
SNX13-211ENST00000496855 FAM86C1Q9NVL1 165 aa7.84□□□□□ -1.15
SNX13-211ENST00000496855 C19orf73Q9NVV2 129 aa7.84□□□□□ -1.15
SNX13-211ENST00000496855 GFOD1Q9NXC2 390 aa7.84□□□□□ -1.15
SNX13-211ENST00000496855 MINPP1Q9UNW1 487 aa7.84□□□□□ -1.15
SNX13-211ENST00000496855 GDNFP39905 211 aa7.83□□□□□ -1.16
SNX13-211ENST00000496855 TEKQ02763 1124 aa7.83□□□□□ -1.16
SNX13-211ENST00000496855 USHBP1Q8N6Y0 703 aa7.83□□□□□ -1.16
SNX13-211ENST00000496855 ADAMTS10Q9H324 1103 aa7.83□□□□□ -1.16
SNX13-211ENST00000496855 TMEM59LQ9UK28 342 aa7.83□□□□□ -1.16
SNX13-211ENST00000496855 MRVI1Q9Y6F6 885 aa7.83□□□□□ -1.16
SNX13-211ENST00000496855 DNAJA1P31689 397 aaKnown RBP7.82□□□□□ -1.16
SNX13-211ENST00000496855 GNPTABQ3T906 1256 aa7.82□□□□□ -1.16
SNX13-211ENST00000496855 RNF111Q6ZNA4 994 aa7.82□□□□□ -1.16
SNX13-211ENST00000496855 GMLQ99445 158 aa7.82□□□□□ -1.16
SNX13-211ENST00000496855 PCDHB10Q9UN67 800 aa7.82□□□□□ -1.16
SNX13-211ENST00000496855 ZC3H6P61129 1189 aaKnown RBP7.81□□□□□ -1.16
SNX13-211ENST00000496855 SLC7A5Q01650 507 aa7.81□□□□□ -1.16
SNX13-211ENST00000496855 MCF2L2Q86YR7 1114 aa7.81□□□□□ -1.16
SNX13-211ENST00000496855 LINC00116Q8NCU8 138 aa7.81□□□□□ -1.16
SNX13-211ENST00000496855 FOXP3Q9BZS1 431 aa7.81□□□□□ -1.16
SNX13-211ENST00000496855 GP6Q9HCN6 339 aa7.81□□□□□ -1.16
SNX13-211ENST00000496855 TCFL5Q9UL49 500 aa7.81□□□□□ -1.16
SNX13-211ENST00000496855 MEIS1O00470 390 aa7.81□□□□□ -1.16
SNX13-211ENST00000496855 SMAD7O15105 426 aaKnown RBP7.81□□□□□ -1.16
SNX13-211ENST00000496855 CBFA2T2O43439 604 aa7.81□□□□□ -1.16
SNX13-211ENST00000496855 CD247P20963 164 aa7.81□□□□□ -1.16
SNX13-211ENST00000496855 HK2P52789 917 aa7.81□□□□□ -1.16
SNX13-211ENST00000496855 PCBP3P57721 371 aaKnown RBP7.81□□□□□ -1.16
SNX13-211ENST00000496855 SYTL4Q96C24 671 aaPredicted RBP7.81□□□□□ -1.16
SNX13-211ENST00000496855 ZNF281Q9Y2X9 895 aa7.81□□□□□ -1.16
SNX13-211ENST00000496855 ZNF451Q9Y4E5 1061 aa7.81□□□□□ -1.16
SNX13-211ENST00000496855 SSU72P8A0A1W2PR75 194 aa7.8□□□□□ -1.16
SNX13-211ENST00000496855 SYPP08247 313 aa7.8□□□□□ -1.16
SNX13-211ENST00000496855 ZGLP1P0C6A0 271 aa7.8□□□□□ -1.16
SNX13-211ENST00000496855 ETFBP38117 255 aa7.8□□□□□ -1.16
SNX13-211ENST00000496855 CTSKP43235 329 aa7.8□□□□□ -1.16
SNX13-211ENST00000496855 AFMP43652 599 aa7.8□□□□□ -1.16
SNX13-211ENST00000496855 ZNF445P59923 1031 aa7.8□□□□□ -1.16
SNX13-211ENST00000496855 TNNI3KQ59H18 835 aa7.8□□□□□ -1.16
SNX13-211ENST00000496855 NOL9Q5SY16 702 aaKnown RBP7.8□□□□□ -1.16
SNX13-211ENST00000496855 KLHL6Q8WZ60 621 aa7.8□□□□□ -1.16
SNX13-211ENST00000496855 DHX38Q92620 1227 aaKnown RBP7.8□□□□□ -1.16
SNX13-211ENST00000496855 ASIC4Q96FT7 647 aa7.8□□□□□ -1.16
SNX13-211ENST00000496855 HAUS7Q99871 368 aa7.8□□□□□ -1.16
SNX13-211ENST00000496855 DSCC1Q9BVC3 393 aa7.8□□□□□ -1.16
SNX13-211ENST00000496855 TCEAL1Q15170 157 aa7.79□□□□□ -1.16
SNX13-211ENST00000496855 NAALADL2Q58DX5 795 aa7.79□□□□□ -1.16
SNX13-211ENST00000496855 VHLLQ6RSH7 139 aa7.79□□□□□ -1.16
SNX13-211ENST00000496855 PRKAG3Q9UGI9 489 aa7.79□□□□□ -1.16
SNX13-211ENST00000496855 FHOD1Q9Y613 1164 aa7.79□□□□□ -1.16
SNX13-211ENST00000496855 ITGA4P13612 1032 aa7.78□□□□□ -1.16
SNX13-211ENST00000496855 RPL10P27635 214 aaKnown RBP7.78□□□□□ -1.16
SNX13-211ENST00000496855 BMP8BP34820 402 aa7.78□□□□□ -1.16
SNX13-211ENST00000496855 FYB2Q5VWT5 728 aa7.78□□□□□ -1.16
SNX13-211ENST00000496855 HEATR6Q6AI08 1181 aaKnown RBP7.78□□□□□ -1.16
SNX13-211ENST00000496855 CRTC3Q6UUV7 619 aa7.78□□□□□ -1.16
SNX13-211ENST00000496855 FAM168AQ92567 244 aa7.78□□□□□ -1.16
SNX13-211ENST00000496855 BRF1Q92994 677 aa7.78□□□□□ -1.16
SNX13-211ENST00000496855 KLHL25Q9H0H3 589 aa7.78□□□□□ -1.16
SNX13-211ENST00000496855 ZNF408Q9H9D4 720 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms