RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 FAM47AQ5JRC9 791 aa23.27■■□□□ 1.32
COL20A1-208ENST00000496810 LRRC47Q8N1G4 583 aaKnown RBP23.27■■□□□ 1.32
COL20A1-208ENST00000496810 DIS3LQ8TF46 1054 aaKnown RBP23.27■■□□□ 1.32
COL20A1-208ENST00000496810 GOPCQ9HD26 462 aa23.27■■□□□ 1.32
COL20A1-208ENST00000496810 HOXC10Q9NYD6 342 aa23.27■■□□□ 1.32
COL20A1-208ENST00000496810 NDUFB10O96000 172 aa23.26■■□□□ 1.31
COL20A1-208ENST00000496810 CTDSPL2Q05D32 466 aa23.26■■□□□ 1.31
COL20A1-208ENST00000496810 TMEM132BQ14DG7 1078 aa23.26■■□□□ 1.31
COL20A1-208ENST00000496810 NPLOC4Q8TAT6 608 aa23.26■■□□□ 1.31
COL20A1-208ENST00000496810 NYAP2Q9P242 653 aa23.26■■□□□ 1.31
COL20A1-208ENST00000496810 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.26■■□□□ 1.31
COL20A1-208ENST00000496810 RPTORQ8N122 1335 aa23.26■■□□□ 1.31
COL20A1-208ENST00000496810 SLC15A5A6NIM6 579 aa23.25■■□□□ 1.31
COL20A1-208ENST00000496810 TRIM6-TRIM34B2RNG4 842 aa23.25■■□□□ 1.31
COL20A1-208ENST00000496810 ERCC3P19447 782 aa23.25■■□□□ 1.31
COL20A1-208ENST00000496810 CCND3P30281 292 aaPredicted RBP23.25■■□□□ 1.31
COL20A1-208ENST00000496810 CACNB2Q08289 660 aaPredicted RBP23.25■■□□□ 1.31
COL20A1-208ENST00000496810 PLS1Q14651 629 aa23.25■■□□□ 1.31
COL20A1-208ENST00000496810 HMX1Q9NP08 348 aaPredicted RBP23.25■■□□□ 1.31
COL20A1-208ENST00000496810 TFRCP02786 760 aaKnown RBP23.24■■□□□ 1.31
COL20A1-208ENST00000496810 ZNF444Q8N0Y2 327 aaPredicted RBP23.24■■□□□ 1.31
COL20A1-208ENST00000496810 RILPL2Q969X0 211 aa23.24■■□□□ 1.31
COL20A1-208ENST00000496810 HELLSQ9NRZ9 838 aa23.24■■□□□ 1.31
COL20A1-208ENST00000496810 MTMR4Q9NYA4 1195 aa23.24■■□□□ 1.31
COL20A1-208ENST00000496810 CLIP2Q9UDT6 1046 aa23.24■■□□□ 1.31
COL20A1-208ENST00000496810 PPP1R9AQ9ULJ8 1098 aa23.24■■□□□ 1.31
COL20A1-208ENST00000496810 ADAMTS5Q9UNA0 930 aa23.24■■□□□ 1.31
COL20A1-208ENST00000496810 F5H6K3 240 aa23.23■■□□□ 1.31
COL20A1-208ENST00000496810 MNX1P50219 401 aaPredicted RBP23.23■■□□□ 1.31
COL20A1-208ENST00000496810 KLRC3Q07444 240 aa23.23■■□□□ 1.31
COL20A1-208ENST00000496810 RASGRP2Q7LDG7 609 aa23.23■■□□□ 1.31
COL20A1-208ENST00000496810 MB21D1Q8N884 522 aa23.23■■□□□ 1.31
COL20A1-208ENST00000496810 REPS2Q8NFH8 660 aa23.23■■□□□ 1.31
COL20A1-208ENST00000496810 IVNS1ABPQ9Y6Y0 642 aa23.23■■□□□ 1.31
COL20A1-208ENST00000496810 TRIOBPQ9H2D6 2365 aa23.23■■□□□ 1.31
COL20A1-208ENST00000496810 NMT2O60551 498 aa23.22■■□□□ 1.31
COL20A1-208ENST00000496810 PDE4AP27815 886 aa23.22■■□□□ 1.31
COL20A1-208ENST00000496810 ADORA2AP29274 412 aa23.22■■□□□ 1.31
COL20A1-208ENST00000496810 TFAP4Q01664 338 aa23.22■■□□□ 1.31
COL20A1-208ENST00000496810 PDE4BQ07343 736 aa23.22■■□□□ 1.31
COL20A1-208ENST00000496810 NCAPG2Q86XI2 1143 aa23.22■■□□□ 1.31
COL20A1-208ENST00000496810 SHCBP1Q8NEM2 672 aa23.22■■□□□ 1.31
COL20A1-208ENST00000496810 NEDD1Q8NHV4 660 aa23.22■■□□□ 1.31
COL20A1-208ENST00000496810 OSBPL3Q9H4L5 887 aa23.22■■□□□ 1.31
COL20A1-208ENST00000496810 ZNF214Q9UL59 606 aaPredicted RBP23.22■■□□□ 1.31
COL20A1-208ENST00000496810 H0YGN5 161 aa23.21■■□□□ 1.31
COL20A1-208ENST00000496810 VWA5AO00534 786 aa23.21■■□□□ 1.31
COL20A1-208ENST00000496810 COBLO75128 1261 aa23.21■■□□□ 1.31
COL20A1-208ENST00000496810 HOXC6P09630 235 aa23.21■■□□□ 1.31
COL20A1-208ENST00000496810 TSPY3P0CV98 308 aa23.21■■□□□ 1.31
COL20A1-208ENST00000496810 TSPY8P0CW00 308 aa23.21■■□□□ 1.31
COL20A1-208ENST00000496810 MCMDC2Q4G0Z9 681 aa23.21■■□□□ 1.31
COL20A1-208ENST00000496810 CHMP4CQ96CF2 233 aa23.21■■□□□ 1.31
COL20A1-208ENST00000496810 ZNF287Q9HBT7 754 aa23.21■■□□□ 1.31
COL20A1-208ENST00000496810 LAMA3Q16787 3333 aa23.21■■□□□ 1.31
COL20A1-208ENST00000496810 CCDC171Q6TFL3 1326 aa23.2■■□□□ 1.3
COL20A1-208ENST00000496810 TTLL1O95922 423 aa23.2■■□□□ 1.3
COL20A1-208ENST00000496810 IGHA2P01877 340 aa23.2■■□□□ 1.3
COL20A1-208ENST00000496810 CYP2C19P33261 490 aa23.2■■□□□ 1.3
COL20A1-208ENST00000496810 PAWRQ96IZ0 340 aaKnown RBP23.2■■□□□ 1.3
COL20A1-208ENST00000496810 SLF1Q9BQI6 1058 aa23.2■■□□□ 1.3
COL20A1-208ENST00000496810 NBPF3Q9H094 633 aa23.2■■□□□ 1.3
COL20A1-208ENST00000496810 FGAP02671 866 aa23.19■■□□□ 1.3
COL20A1-208ENST00000496810 SLC3A2P08195 630 aaKnown RBP23.19■■□□□ 1.3
COL20A1-208ENST00000496810 HSPD1P10809 573 aaKnown RBP23.19■■□□□ 1.3
COL20A1-208ENST00000496810 SDSP20132 328 aa23.19■■□□□ 1.3
COL20A1-208ENST00000496810 TRMT44Q8IYL2 757 aaKnown RBP23.19■■□□□ 1.3
COL20A1-208ENST00000496810 TRPV1Q8NER1 839 aa23.19■■□□□ 1.3
COL20A1-208ENST00000496810 MKL1Q969V6 931 aa23.19■■□□□ 1.3
COL20A1-208ENST00000496810 IL17RBQ9NRM6 502 aa23.19■■□□□ 1.3
COL20A1-208ENST00000496810 ANAPC4Q9UJX5 808 aa23.19■■□□□ 1.3
COL20A1-208ENST00000496810 HAND2P61296 217 aa23.18■■□□□ 1.3
COL20A1-208ENST00000496810 ALX1Q15699 326 aa23.18■■□□□ 1.3
COL20A1-208ENST00000496810 MROH8Q9H579 483 aa23.18■■□□□ 1.3
COL20A1-208ENST00000496810 OGDHLQ9ULD0 1010 aa23.18■■□□□ 1.3
COL20A1-208ENST00000496810 MCM3APO60318 1980 aa23.18■■□□□ 1.3
COL20A1-208ENST00000496810 SZT2Q5T011 3432 aa23.17■■□□□ 1.3
COL20A1-208ENST00000496810 LHX8Q68G74 356 aa23.17■■□□□ 1.3
COL20A1-208ENST00000496810 RIOX2Q8IUF8 465 aa23.17■■□□□ 1.3
COL20A1-208ENST00000496810 GMCL1P1Q8NEA9 526 aa23.17■■□□□ 1.3
COL20A1-208ENST00000496810 DPF3Q92784 378 aa23.17■■□□□ 1.3
COL20A1-208ENST00000496810 SMCHD1A6NHR9 2005 aa23.16■■□□□ 1.3
COL20A1-208ENST00000496810 TSPY2A6NKD2 308 aa23.16■■□□□ 1.3
COL20A1-208ENST00000496810 MFSD14CQ5VZR4 134 aa23.16■■□□□ 1.3
COL20A1-208ENST00000496810 DPP9Q86TI2 863 aa23.16■■□□□ 1.3
COL20A1-208ENST00000496810 TBC1D10CQ8IV04 446 aa23.16■■□□□ 1.3
COL20A1-208ENST00000496810 IL25Q9H293 177 aa23.16■■□□□ 1.3
COL20A1-208ENST00000496810 RIPK3Q9Y572 518 aa23.16■■□□□ 1.3
COL20A1-208ENST00000496810 ZMYM6O95789 1325 aa23.15■■□□□ 1.3
COL20A1-208ENST00000496810 STRNO43815 780 aa23.15■■□□□ 1.3
COL20A1-208ENST00000496810 ORC4O43929 436 aa23.15■■□□□ 1.3
COL20A1-208ENST00000496810 RANBP6O60518 1105 aaKnown RBP23.15■■□□□ 1.3
COL20A1-208ENST00000496810 PGK2P07205 417 aa23.15■■□□□ 1.3
COL20A1-208ENST00000496810 FGRP09769 529 aa23.15■■□□□ 1.3
COL20A1-208ENST00000496810 CYBAP13498 195 aa23.15■■□□□ 1.3
COL20A1-208ENST00000496810 GSPT1P15170 499 aaKnown RBP23.15■■□□□ 1.3
COL20A1-208ENST00000496810 STAT3P40763 770 aa23.15■■□□□ 1.3
COL20A1-208ENST00000496810 SLFN13Q68D06 897 aa23.15■■□□□ 1.3
COL20A1-208ENST00000496810 CWC27Q6UX04 472 aaKnown RBP23.15■■□□□ 1.3
COL20A1-208ENST00000496810 KIFC2Q96AC6 838 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms