RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 BTBD19C9JJ37 291 aa21.43■■□□□ 1.02
TSSC4-210ENST00000496468 CALM1P0DP23 149 aa21.43■■□□□ 1.02
TSSC4-210ENST00000496468 CALM2P0DP24 149 aa21.43■■□□□ 1.02
TSSC4-210ENST00000496468 CALM3P0DP25 149 aa21.43■■□□□ 1.02
TSSC4-210ENST00000496468 SNHG28P0DPA3 235 aa21.43■■□□□ 1.02
TSSC4-210ENST00000496468 BMP3P12645 472 aa21.43■■□□□ 1.02
TSSC4-210ENST00000496468 INHBEP58166 350 aa21.43■■□□□ 1.02
TSSC4-210ENST00000496468 ANKRD23Q86SG2 305 aa21.43■■□□□ 1.02
TSSC4-210ENST00000496468 REM2Q8IYK8 340 aaPredicted RBP21.43■■□□□ 1.02
TSSC4-210ENST00000496468 ALDH8A1Q9H2A2 487 aaPredicted RBP21.43■■□□□ 1.02
TSSC4-210ENST00000496468 ZBTB43O43298 467 aa21.42■■□□□ 1.02
TSSC4-210ENST00000496468 MAP2K2P36507 400 aa21.42■■□□□ 1.02
TSSC4-210ENST00000496468 TROAPQ12815 778 aa21.42■■□□□ 1.02
TSSC4-210ENST00000496468 ASPRV1Q53RT3 343 aa21.42■■□□□ 1.02
TSSC4-210ENST00000496468 FRMPD2Q68DX3 1309 aaPredicted RBP21.42■■□□□ 1.02
TSSC4-210ENST00000496468 GPAT2Q6NUI2 795 aa21.42■■□□□ 1.02
TSSC4-210ENST00000496468 NOL8Q76FK4 1167 aaKnown RBP21.42■■□□□ 1.02
TSSC4-210ENST00000496468 RAB11FIP4Q86YS3 637 aa21.42■■□□□ 1.02
TSSC4-210ENST00000496468 IL27Q8NEV9 243 aa21.42■■□□□ 1.02
TSSC4-210ENST00000496468 PNMA3Q9UL41 463 aa21.42■■□□□ 1.02
TSSC4-210ENST00000496468 BRPF3Q9ULD4 1205 aa21.42■■□□□ 1.02
TSSC4-210ENST00000496468 SLC45A1Q9Y2W3 748 aa21.42■■□□□ 1.02
TSSC4-210ENST00000496468 NID2Q14112 1375 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 GOLGA8AA7E2F4 631 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 USP17L15C9J2P7 530 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 USP17L13C9JLJ4 530 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 USP17L11C9JVI0 530 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 USP17L18D6R9N7 530 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 USP17L22D6RA61 530 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 USP17L17D6RBQ6 530 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 USP17L19D6RCP7 530 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 USP17L20D6RJB6 530 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 IGF2BP3O00425 579 aaKnown RBP eCLIP21.41■■□□□ 1.02
TSSC4-210ENST00000496468 PARP1P09874 1014 aaKnown RBP21.41■■□□□ 1.02
TSSC4-210ENST00000496468 RXRAP19793 462 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 RCAN1P53805 252 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 IRX3P78415 501 aaPredicted RBP21.41■■□□□ 1.02
TSSC4-210ENST00000496468 ZNF543Q08ER8 600 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 USP17L24Q0WX57 530 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 GRM4Q14833 912 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 GPATCH4Q5T3I0 446 aaKnown RBP21.41■■□□□ 1.02
TSSC4-210ENST00000496468 OTUD7BQ6GQQ9 843 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 KCTD1Q719H9 257 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 IFNL1Q8IU54 200 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 FAM43AQ8N2R8 423 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 CTCFLQ8NI51 663 aaPredicted RBP21.41■■□□□ 1.02
TSSC4-210ENST00000496468 ZCCHC17Q9NP64 241 aaKnown RBP21.41■■□□□ 1.02
TSSC4-210ENST00000496468 A0A0G2JMZ2 1700 aa21.41■■□□□ 1.02
TSSC4-210ENST00000496468 PDHXO00330 501 aa21.4■■□□□ 1.02
TSSC4-210ENST00000496468 KIF5BP33176 963 aa21.4■■□□□ 1.02
TSSC4-210ENST00000496468 METAP2P50579 478 aaKnown RBP eCLIP21.4■■□□□ 1.02
TSSC4-210ENST00000496468 IKQ13123 557 aaPredicted RBP21.4■■□□□ 1.02
TSSC4-210ENST00000496468 PARK7Q99497 189 aaKnown RBP21.4■■□□□ 1.02
TSSC4-210ENST00000496468 MAP3K14Q99558 947 aa21.4■■□□□ 1.02
TSSC4-210ENST00000496468 PTPN18Q99952 460 aa21.4■■□□□ 1.02
TSSC4-210ENST00000496468 FLOT1O75955 427 aa21.39■■□□□ 1.01
TSSC4-210ENST00000496468 OSBPP22059 807 aa21.39■■□□□ 1.01
TSSC4-210ENST00000496468 HOXA7P31268 230 aaPredicted RBP21.39■■□□□ 1.01
TSSC4-210ENST00000496468 TM4SF4P48230 202 aa21.39■■□□□ 1.01
TSSC4-210ENST00000496468 STAT2P52630 851 aa21.39■■□□□ 1.01
TSSC4-210ENST00000496468 EVCP57679 992 aa21.39■■□□□ 1.01
TSSC4-210ENST00000496468 RTN1Q16799 776 aa21.39■■□□□ 1.01
TSSC4-210ENST00000496468 CCDC144CPQ8IYA2 1237 aa21.39■■□□□ 1.01
TSSC4-210ENST00000496468 LARP6Q9BRS8 491 aaKnown RBP21.39■■□□□ 1.01
TSSC4-210ENST00000496468 GPCPD1Q9NPB8 672 aa21.39■■□□□ 1.01
TSSC4-210ENST00000496468 TMEM232C9JQI7 657 aa21.38■■□□□ 1.01
TSSC4-210ENST00000496468 GOLGA8HP0CJ92 632 aa21.38■■□□□ 1.01
TSSC4-210ENST00000496468 SAMD1Q6SPF0 538 aaPredicted RBP21.38■■□□□ 1.01
TSSC4-210ENST00000496468 CATSPERGQ6ZRH7 1159 aa21.38■■□□□ 1.01
TSSC4-210ENST00000496468 FAM160B2Q86V87 743 aa21.38■■□□□ 1.01
TSSC4-210ENST00000496468 ASCC2Q9H1I8 757 aaPredicted RBP21.38■■□□□ 1.01
TSSC4-210ENST00000496468 MAD2L2Q9UI95 211 aa21.38■■□□□ 1.01
TSSC4-210ENST00000496468 FEM1BQ9UK73 627 aa21.38■■□□□ 1.01
TSSC4-210ENST00000496468 TPCN1Q9ULQ1 816 aa21.38■■□□□ 1.01
TSSC4-210ENST00000496468 RLFQ13129 1914 aa21.37■■□□□ 1.01
TSSC4-210ENST00000496468 MYPNQ86TC9 1320 aa21.37■■□□□ 1.01
TSSC4-210ENST00000496468 ZNF274Q96GC6 653 aaPredicted RBP21.37■■□□□ 1.01
TSSC4-210ENST00000496468 SLF1Q9BQI6 1058 aa21.37■■□□□ 1.01
TSSC4-210ENST00000496468 FBXO28Q9NVF7 368 aa21.37■■□□□ 1.01
TSSC4-210ENST00000496468 RBM28Q9NW13 759 aaKnown RBP21.37■■□□□ 1.01
TSSC4-210ENST00000496468 PALM3A6NDB9 673 aaPredicted RBP21.36■■□□□ 1.01
TSSC4-210ENST00000496468 ALDH1A1P00352 501 aa21.36■■□□□ 1.01
TSSC4-210ENST00000496468 PDIA3P30101 505 aaKnown RBP21.36■■□□□ 1.01
TSSC4-210ENST00000496468 STK3Q13188 491 aa21.36■■□□□ 1.01
TSSC4-210ENST00000496468 TAF1CQ15572 869 aaPredicted RBP21.36■■□□□ 1.01
TSSC4-210ENST00000496468 STAG2Q8N3U4 1231 aa21.36■■□□□ 1.01
TSSC4-210ENST00000496468 FANCBQ8NB91 859 aa21.36■■□□□ 1.01
TSSC4-210ENST00000496468 SMCR8Q8TEV9 937 aaPredicted RBP21.36■■□□□ 1.01
TSSC4-210ENST00000496468 CHURC1Q8WUH1 139 aa21.36■■□□□ 1.01
TSSC4-210ENST00000496468 PPP1R9AQ9ULJ8 1098 aa21.36■■□□□ 1.01
TSSC4-210ENST00000496468 HPS5Q9UPZ3 1129 aa21.36■■□□□ 1.01
TSSC4-210ENST00000496468 SPDYE16A6NNV3 312 aaPredicted RBP21.35■■□□□ 1.01
TSSC4-210ENST00000496468 PLA2G6O60733 806 aa21.35■■□□□ 1.01
TSSC4-210ENST00000496468 MCM2P49736 904 aa21.35■■□□□ 1.01
TSSC4-210ENST00000496468 GNAQP50148 359 aa21.35■■□□□ 1.01
TSSC4-210ENST00000496468 HERVK_113P62684 666 aa21.35■■□□□ 1.01
TSSC4-210ENST00000496468 SYDE2Q5VT97 1194 aa21.35■■□□□ 1.01
TSSC4-210ENST00000496468 TTBK2Q6IQ55 1244 aa21.35■■□□□ 1.01
TSSC4-210ENST00000496468 GTF3C2Q8WUA4 911 aaPredicted RBP21.35■■□□□ 1.01
TSSC4-210ENST00000496468 KIFC2Q96AC6 838 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms