RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 A6NNZ2 444 aa14.54□□□□□ -0.08
PTPRF-215ENST00000496447 SEMA3EO15041 775 aa14.54□□□□□ -0.08
PTPRF-215ENST00000496447 PDE8BO95263 885 aa14.54□□□□□ -0.08
PTPRF-215ENST00000496447 TUBB8Q3ZCM7 444 aa14.54□□□□□ -0.08
PTPRF-215ENST00000496447 A0A0D9SFI3 127 aa14.54□□□□□ -0.08
PTPRF-215ENST00000496447 KMT5BQ4FZB7 885 aa14.54□□□□□ -0.08
PTPRF-215ENST00000496447 ARHGEF25Q86VW2 580 aa14.54□□□□□ -0.08
PTPRF-215ENST00000496447 FANCBQ8NB91 859 aa14.54□□□□□ -0.08
PTPRF-215ENST00000496447 HAUS2Q9NVX0 235 aa14.54□□□□□ -0.08
PTPRF-215ENST00000496447 PCDHB13Q9Y5F0 798 aa14.54□□□□□ -0.08
PTPRF-215ENST00000496447 ABCC4O15439 1325 aa14.54□□□□□ -0.08
PTPRF-215ENST00000496447 MYOM2P54296 1465 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 KDM2BQ8NHM5 1336 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 ZBTB24O43167 697 aaPredicted RBP14.53□□□□□ -0.08
PTPRF-215ENST00000496447 PHKA1P46020 1223 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 LIG4P49917 911 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 RNASE9P60153 205 aaKnown RBP14.53□□□□□ -0.08
PTPRF-215ENST00000496447 BIRC2Q13490 618 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 EP400NLQ6ZTU2 488 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 ADPGKQ9BRR6 497 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 TEKT3Q9BXF9 490 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 TM6SF1Q9BZW5 370 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 WDR17Q8IZU2 1322 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 UGGT1Q9NYU2 1555 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 HSPD1P10809 573 aaKnown RBP14.53□□□□□ -0.08
PTPRF-215ENST00000496447 CLNS1AP54105 237 aaKnown RBP14.53□□□□□ -0.08
PTPRF-215ENST00000496447 KLHL30Q0D2K2 578 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 KCTD2Q14681 263 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 SEC62Q99442 399 aaKnown RBP14.53□□□□□ -0.08
PTPRF-215ENST00000496447 NFE2L3Q9Y4A8 694 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 TECP42680 631 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 ARHGEF6Q15052 776 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 ARHGAP44Q17R89 818 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 ZNF274Q96GC6 653 aaPredicted RBP14.53□□□□□ -0.08
PTPRF-215ENST00000496447 CSRNP1Q96S65 589 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 NAPGQ99747 312 aaPredicted RBP14.53□□□□□ -0.08
PTPRF-215ENST00000496447 STIM2Q9P246 746 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 PCDHA12Q9UN75 941 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 ACTN4O43707 911 aaKnown RBP14.53□□□□□ -0.08
PTPRF-215ENST00000496447 SETSIPP0DME0 302 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 CYP2J2P51589 502 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 CCNA1P78396 465 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 CLUL1Q15846 466 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 FAM193BQ96PV7 902 aaPredicted RBP14.53□□□□□ -0.08
PTPRF-215ENST00000496447 SUGCTQ9HAC7 445 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 KDM5AP29375 1690 aaKnown RBP14.53□□□□□ -0.08
PTPRF-215ENST00000496447 DDAH1O94760 285 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 LRMPQ12912 555 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 PLA2G4DQ86XP0 818 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 ARFGAP2Q8N6H7 521 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 SECISBP2LQ93073 1101 aaKnown RBP14.53□□□□□ -0.08
PTPRF-215ENST00000496447 MED10Q9BTT4 135 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 NBPF3Q9H094 633 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 ANAPC4Q9UJX5 808 aa14.53□□□□□ -0.08
PTPRF-215ENST00000496447 DTNBO60941 627 aa14.52□□□□□ -0.08
PTPRF-215ENST00000496447 INPP5BP32019 993 aa14.52□□□□□ -0.08
PTPRF-215ENST00000496447 DPP9Q86TI2 863 aa14.52□□□□□ -0.08
PTPRF-215ENST00000496447 GPIHBP1Q8IV16 184 aa14.52□□□□□ -0.08
PTPRF-215ENST00000496447 AFAP1L1Q8TED9 768 aa14.52□□□□□ -0.08
PTPRF-215ENST00000496447 GNA14O95837 355 aa14.52□□□□□ -0.08
PTPRF-215ENST00000496447 POLA2Q14181 598 aa14.52□□□□□ -0.08
PTPRF-215ENST00000496447 PPP2R5DQ14738 602 aa14.52□□□□□ -0.08
PTPRF-215ENST00000496447 SFMBT2Q5VUG0 894 aa14.52□□□□□ -0.08
PTPRF-215ENST00000496447 NEK8Q86SG6 692 aa14.52□□□□□ -0.08
PTPRF-215ENST00000496447 GPKOWQ92917 476 aaPredicted RBP eCLIP14.52□□□□□ -0.08
PTPRF-215ENST00000496447 DBNDD1Q9H9R9 158 aa14.52□□□□□ -0.08
PTPRF-215ENST00000496447 NKIRAS1Q9NYS0 192 aa14.52□□□□□ -0.08
PTPRF-215ENST00000496447 SCG2P13521 617 aa14.52□□□□□ -0.09
PTPRF-215ENST00000496447 ERFEQ4G0M1 354 aa14.52□□□□□ -0.09
PTPRF-215ENST00000496447 DDX25Q9UHL0 483 aaKnown RBP14.52□□□□□ -0.09
PTPRF-215ENST00000496447 THRAP3Q9Y2W1 955 aaKnown RBP14.52□□□□□ -0.09
PTPRF-215ENST00000496447 CD2APQ9Y5K6 639 aa14.52□□□□□ -0.09
PTPRF-215ENST00000496447 BBOX1O75936 387 aa14.52□□□□□ -0.09
PTPRF-215ENST00000496447 ZSCAN26Q16670 478 aa14.52□□□□□ -0.09
PTPRF-215ENST00000496447 KRT26Q7Z3Y9 468 aa14.52□□□□□ -0.09
PTPRF-215ENST00000496447 CCDC84Q86UT8 332 aaPredicted RBP14.52□□□□□ -0.09
PTPRF-215ENST00000496447 SERTAD1Q9UHV2 236 aa14.52□□□□□ -0.09
PTPRF-215ENST00000496447 ZMYM6O95789 1325 aa14.52□□□□□ -0.09
PTPRF-215ENST00000496447 EFCC1Q9HA90 598 aa14.51□□□□□ -0.09
PTPRF-215ENST00000496447 UTP11Q9Y3A2 253 aaKnown RBP14.51□□□□□ -0.09
PTPRF-215ENST00000496447 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.51□□□□□ -0.09
PTPRF-215ENST00000496447 H0YCG3 227 aa14.51□□□□□ -0.09
PTPRF-215ENST00000496447 ATP5DP30049 168 aa14.51□□□□□ -0.09
PTPRF-215ENST00000496447 EVCP57679 992 aa14.51□□□□□ -0.09
PTPRF-215ENST00000496447 IRX5P78411 483 aaPredicted RBP14.51□□□□□ -0.09
PTPRF-215ENST00000496447 CPLX4Q7Z7G2 160 aa14.51□□□□□ -0.09
PTPRF-215ENST00000496447 NOSTRINQ8IVI9 506 aa14.51□□□□□ -0.09
PTPRF-215ENST00000496447 TBC1D31Q96DN5 1066 aa14.51□□□□□ -0.09
PTPRF-215ENST00000496447 MRRFQ96E11 262 aaKnown RBP14.51□□□□□ -0.09
PTPRF-215ENST00000496447 PPANQ9NQ55 473 aaKnown RBP14.51□□□□□ -0.09
PTPRF-215ENST00000496447 ST7Q9NRC1 585 aa14.51□□□□□ -0.09
PTPRF-215ENST00000496447 MED23Q9ULK4 1368 aa14.51□□□□□ -0.09
PTPRF-215ENST00000496447 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.51□□□□□ -0.09
PTPRF-215ENST00000496447 K7ENM7 598 aa14.51□□□□□ -0.09
PTPRF-215ENST00000496447 TNNC2P02585 160 aa14.51□□□□□ -0.09
PTPRF-215ENST00000496447 ATF7P17544 494 aaPredicted RBP14.51□□□□□ -0.09
PTPRF-215ENST00000496447 TMOD1P28289 359 aa14.51□□□□□ -0.09
PTPRF-215ENST00000496447 MAGEA1P43355 309 aa14.51□□□□□ -0.09
PTPRF-215ENST00000496447 UBE3CQ15386 1083 aa14.51□□□□□ -0.09
PTPRF-215ENST00000496447 SUPT20HL1Q3ZLR7 823 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms