RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 ARVCFO00192 962 aa14.38□□□□□ -0.11
ATG3-209ENST00000496423 SSTR3P32745 418 aaPredicted RBP14.38□□□□□ -0.11
ATG3-209ENST00000496423 RFX5P48382 616 aaPredicted RBP14.38□□□□□ -0.11
ATG3-209ENST00000496423 CDK7P50613 346 aa14.38□□□□□ -0.11
ATG3-209ENST00000496423 OTOP2Q7RTS6 562 aa14.38□□□□□ -0.11
ATG3-209ENST00000496423 GJD3Q8N144 294 aa14.38□□□□□ -0.11
ATG3-209ENST00000496423 SH3RF3Q8TEJ3 882 aaPredicted RBP14.38□□□□□ -0.11
ATG3-209ENST00000496423 TGFBRAP1Q8WUH2 860 aa14.38□□□□□ -0.11
ATG3-209ENST00000496423 TINF2Q9BSI4 451 aa14.38□□□□□ -0.11
ATG3-209ENST00000496423 LRP2BPQ9P2M1 347 aa14.38□□□□□ -0.11
ATG3-209ENST00000496423 FAM184BQ9ULE4 1060 aa14.38□□□□□ -0.11
ATG3-209ENST00000496423 DIS3Q9Y2L1 958 aaKnown RBP14.38□□□□□ -0.11
ATG3-209ENST00000496423 ZBBXA8MT70 800 aa14.37□□□□□ -0.11
ATG3-209ENST00000496423 ADAMTS4O75173 837 aa14.37□□□□□ -0.11
ATG3-209ENST00000496423 SLC25A27O95847 323 aa14.37□□□□□ -0.11
ATG3-209ENST00000496423 RABGGTBP53611 331 aa14.37□□□□□ -0.11
ATG3-209ENST00000496423 GORABQ5T7V8 394 aa14.37□□□□□ -0.11
ATG3-209ENST00000496423 MAPKAPK5Q8IW41 473 aa14.37□□□□□ -0.11
ATG3-209ENST00000496423 PALD1Q9ULE6 856 aa14.37□□□□□ -0.11
ATG3-209ENST00000496423 HDAC5Q9UQL6 1122 aa14.37□□□□□ -0.11
ATG3-209ENST00000496423 ROBO3Q96MS0 1386 aa14.36□□□□□ -0.11
ATG3-209ENST00000496423 CDK5RAP2Q96SN8 1893 aa14.36□□□□□ -0.11
ATG3-209ENST00000496423 ATP2A2P16615 1042 aaKnown RBP14.36□□□□□ -0.11
ATG3-209ENST00000496423 TIMM10P62072 90 aa14.36□□□□□ -0.11
ATG3-209ENST00000496423 KCTD2Q14681 263 aa14.36□□□□□ -0.11
ATG3-209ENST00000496423 WDR63Q8IWG1 891 aa14.36□□□□□ -0.11
ATG3-209ENST00000496423 TANGO6Q9C0B7 1094 aa14.36□□□□□ -0.11
ATG3-209ENST00000496423 DNAJC18Q9H819 358 aa14.36□□□□□ -0.11
ATG3-209ENST00000496423 CHD9Q3L8U1 2897 aa14.36□□□□□ -0.11
ATG3-209ENST00000496423 KIF28PB7ZC32 967 aa14.35□□□□□ -0.11
ATG3-209ENST00000496423 ADORA1P30542 326 aa14.35□□□□□ -0.11
ATG3-209ENST00000496423 CYP2C18P33260 490 aa14.35□□□□□ -0.11
ATG3-209ENST00000496423 ABCB5Q2M3G0 1257 aa14.35□□□□□ -0.11
ATG3-209ENST00000496423 CERKLQ49MI3 558 aaPredicted RBP14.35□□□□□ -0.11
ATG3-209ENST00000496423 SPATA5Q8NB90 893 aa14.35□□□□□ -0.11
ATG3-209ENST00000496423 KLHDC9Q8NEP7 349 aa14.35□□□□□ -0.11
ATG3-209ENST00000496423 MFSD14AQ96MC6 490 aa14.35□□□□□ -0.11
ATG3-209ENST00000496423 MMP19Q99542 508 aa14.35□□□□□ -0.11
ATG3-209ENST00000496423 SEZ6LQ9BYH1 1024 aa14.35□□□□□ -0.11
ATG3-209ENST00000496423 USP44Q9H0E7 712 aa14.35□□□□□ -0.11
ATG3-209ENST00000496423 HIPK3Q9H422 1215 aa14.35□□□□□ -0.11
ATG3-209ENST00000496423 AATFQ9NY61 560 aaKnown RBP eCLIP14.35□□□□□ -0.11
ATG3-209ENST00000496423 PRRC2BQ5JSZ5 2229 aaKnown RBP14.34□□□□□ -0.11
ATG3-209ENST00000496423 RFXAPO00287 272 aa14.34□□□□□ -0.11
ATG3-209ENST00000496423 DUSP11O75319 330 aaKnown RBP14.34□□□□□ -0.11
ATG3-209ENST00000496423 ASGR1P07306 291 aa14.34□□□□□ -0.11
ATG3-209ENST00000496423 C6orf222P0C671 652 aaPredicted RBP14.34□□□□□ -0.11
ATG3-209ENST00000496423 ZNF865P0CJ78 1059 aaPredicted RBP14.34□□□□□ -0.11
ATG3-209ENST00000496423 PPP4CP60510 307 aa14.34□□□□□ -0.11
ATG3-209ENST00000496423 SHROOM1Q2M3G4 852 aaPredicted RBP14.34□□□□□ -0.11
ATG3-209ENST00000496423 NAA16Q6N069 864 aaPredicted RBP14.34□□□□□ -0.11
ATG3-209ENST00000496423 FAM178BQ8IXR5 827 aa14.34□□□□□ -0.11
ATG3-209ENST00000496423 MSL3Q8N5Y2 521 aaKnown RBP14.34□□□□□ -0.11
ATG3-209ENST00000496423 ZNF384Q8TF68 577 aa14.34□□□□□ -0.11
ATG3-209ENST00000496423 XAGE2Q96GT9 111 aa14.34□□□□□ -0.11
ATG3-209ENST00000496423 FLT1P17948 1338 aa14.34□□□□□ -0.11
ATG3-209ENST00000496423 SYNRGQ9UMZ2 1314 aa14.34□□□□□ -0.11
ATG3-209ENST00000496423 SIPA1L1O43166 1804 aa14.34□□□□□ -0.11
ATG3-209ENST00000496423 PFKMP08237 780 aa14.33□□□□□ -0.12
ATG3-209ENST00000496423 ACTN1P12814 892 aa14.33□□□□□ -0.12
ATG3-209ENST00000496423 MYOGP15173 224 aa14.33□□□□□ -0.12
ATG3-209ENST00000496423 CST5P28325 142 aaPredicted RBP14.33□□□□□ -0.12
ATG3-209ENST00000496423 TATDN1Q6P1N9 297 aa14.33□□□□□ -0.12
ATG3-209ENST00000496423 FAM126BQ8IXS8 530 aa14.33□□□□□ -0.12
ATG3-209ENST00000496423 NEUROD6Q96NK8 337 aa14.33□□□□□ -0.12
ATG3-209ENST00000496423 CERS4Q9HA82 394 aa14.33□□□□□ -0.12
ATG3-209ENST00000496423 CD320Q9NPF0 282 aa14.33□□□□□ -0.12
ATG3-209ENST00000496423 LMCD1Q9NZU5 365 aa14.33□□□□□ -0.12
ATG3-209ENST00000496423 HMG20BQ9P0W2 317 aa14.33□□□□□ -0.12
ATG3-209ENST00000496423 XIRP2A4UGR9 3374 aa14.33□□□□□ -0.12
ATG3-209ENST00000496423 A0A1B0GUL7 405 aa14.32□□□□□ -0.12
ATG3-209ENST00000496423 DCXO43602 365 aa14.32□□□□□ -0.12
ATG3-209ENST00000496423 IGSF3O75054 1194 aa14.32□□□□□ -0.12
ATG3-209ENST00000496423 CA3P07451 260 aa14.32□□□□□ -0.12
ATG3-209ENST00000496423 COPB2P35606 906 aa14.32□□□□□ -0.12
ATG3-209ENST00000496423 PUS10Q3MIT2 529 aaKnown RBP14.32□□□□□ -0.12
ATG3-209ENST00000496423 GNASQ5JWF2 1037 aa14.32□□□□□ -0.12
ATG3-209ENST00000496423 CCSAPQ6IQ19 270 aaPredicted RBP14.32□□□□□ -0.12
ATG3-209ENST00000496423 TBC1D9Q6ZT07 1266 aa14.32□□□□□ -0.12
ATG3-209ENST00000496423 TTC6Q86TZ1 520 aa14.32□□□□□ -0.12
ATG3-209ENST00000496423 ARNTL2Q8WYA1 636 aa14.32□□□□□ -0.12
ATG3-209ENST00000496423 PRRX2Q99811 253 aa14.32□□□□□ -0.12
ATG3-209ENST00000496423 SAP30BPQ9UHR5 308 aaKnown RBP14.32□□□□□ -0.12
ATG3-209ENST00000496423 SERPINB13Q9UIV8 391 aa14.32□□□□□ -0.12
ATG3-209ENST00000496423 CD4P01730 458 aa14.31□□□□□ -0.12
ATG3-209ENST00000496423 TAL1P17542 331 aaPredicted RBP14.31□□□□□ -0.12
ATG3-209ENST00000496423 ZNF792Q3KQV3 632 aa14.31□□□□□ -0.12
ATG3-209ENST00000496423 CERS3Q8IU89 383 aa14.31□□□□□ -0.12
ATG3-209ENST00000496423 ACER1Q8TDN7 264 aa14.31□□□□□ -0.12
ATG3-209ENST00000496423 CDCA7LQ96GN5 454 aa14.31□□□□□ -0.12
ATG3-209ENST00000496423 PTPRCP08575 1304 aa14.31□□□□□ -0.12
ATG3-209ENST00000496423 REV3LO60673 3130 aa14.3□□□□□ -0.12
ATG3-209ENST00000496423 FOCADQ5VW36 1801 aa14.3□□□□□ -0.12
ATG3-209ENST00000496423 CABYRO75952 493 aa14.3□□□□□ -0.12
ATG3-209ENST00000496423 FLOT1O75955 427 aa14.3□□□□□ -0.12
ATG3-209ENST00000496423 PGK2P07205 417 aa14.3□□□□□ -0.12
ATG3-209ENST00000496423 UQCRFS1P1P0C7P4 283 aa14.3□□□□□ -0.12
ATG3-209ENST00000496423 CCL23P55773 120 aa14.3□□□□□ -0.12
ATG3-209ENST00000496423 PHOSPHO2Q8TCD6 241 aa14.3□□□□□ -0.12
ATG3-209ENST00000496423 SLC9A7Q96T83 725 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms