RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 RETREG2Q8NC44 543 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 NSUN4Q96CB9 384 aaKnown RBP9.88□□□□□ -0.83
VPS13B-206ENST00000496144 APBA2Q99767 749 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 MROH8Q9H579 483 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 KAT14Q9H8E8 782 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 SYT1P21579 422 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.88□□□□□ -0.83
VPS13B-206ENST00000496144 SH3TC2Q8TF17 1288 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 ZNF512BQ96KM6 892 aaPredicted RBP9.88□□□□□ -0.83
VPS13B-206ENST00000496144 ZHX1Q9UKY1 873 aaPredicted RBP9.88□□□□□ -0.83
VPS13B-206ENST00000496144 SNCAIPQ9Y6H5 919 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 INHAP05111 366 aa9.87□□□□□ -0.83
VPS13B-206ENST00000496144 COL9A3Q14050 684 aaPredicted RBP9.87□□□□□ -0.83
VPS13B-206ENST00000496144 DLK2Q6UY11 383 aa9.87□□□□□ -0.83
VPS13B-206ENST00000496144 DCDC2CA8MYV0 355 aa9.87□□□□□ -0.83
VPS13B-206ENST00000496144 FLT3LGP49771 235 aa9.87□□□□□ -0.83
VPS13B-206ENST00000496144 C7orf61Q8IZ16 206 aa9.87□□□□□ -0.83
VPS13B-206ENST00000496144 SLC15A5A6NIM6 579 aa9.87□□□□□ -0.83
VPS13B-206ENST00000496144 CYP2C8P10632 490 aa9.87□□□□□ -0.83
VPS13B-206ENST00000496144 FAM163AQ96GL9 167 aaPredicted RBP9.87□□□□□ -0.83
VPS13B-206ENST00000496144 LRSAM1Q6UWE0 723 aa9.87□□□□□ -0.83
VPS13B-206ENST00000496144 TMEM63CQ9P1W3 806 aa9.87□□□□□ -0.83
VPS13B-206ENST00000496144 A0A0G2JLL6 359 aaPredicted RBP9.86□□□□□ -0.83
VPS13B-206ENST00000496144 WDR46O15213 610 aaKnown RBP9.86□□□□□ -0.83
VPS13B-206ENST00000496144 STRNO43815 780 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 PDIA4P13667 645 aaKnown RBP9.86□□□□□ -0.83
VPS13B-206ENST00000496144 PDE6AP16499 860 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 PRRT2Q7Z6L0 340 aaPredicted RBP9.86□□□□□ -0.83
VPS13B-206ENST00000496144 KIFC2Q96AC6 838 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 NEK1Q96PY6 1258 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 UBE2OQ9C0C9 1292 aaKnown RBP9.86□□□□□ -0.83
VPS13B-206ENST00000496144 STX8Q9UNK0 236 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 SLF1Q9BQI6 1058 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 ASCC2Q9H1I8 757 aaPredicted RBP9.86□□□□□ -0.83
VPS13B-206ENST00000496144 MTMR6Q9Y217 621 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 SBF1O95248 1867 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 TKFCQ3LXA3 575 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 MFSD6Q6ZSS7 791 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 SEC63Q9UGP8 760 aaKnown RBP9.86□□□□□ -0.83
VPS13B-206ENST00000496144 FEM1BQ9UK73 627 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 GJB1P08034 283 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 PPP4CP60510 307 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 VGLL2Q8N8G2 317 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.86□□□□□ -0.83
VPS13B-206ENST00000496144 FLT1P17948 1338 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 GADD45BO75293 160 aaPredicted RBP9.86□□□□□ -0.83
VPS13B-206ENST00000496144 SLC1A4P43007 532 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 HERVK_113P62684 666 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 UBE3CQ15386 1083 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 NECAB1Q8N987 351 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 APPBP2Q92624 585 aa9.86□□□□□ -0.83
VPS13B-206ENST00000496144 COL4A1P02462 1669 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 ASB14A6NK59 587 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 POTEB2H3BUK9 544 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 MARCH6O60337 910 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 CCDC173Q0VFZ6 552 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 CPXCR1Q8N123 301 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 ANKLE1Q8NAG6 615 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 CFHR5Q9BXR6 569 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 ATP6V1DQ9Y5K8 247 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 MYO5AQ9Y4I1 1855 aaKnown RBP9.85□□□□□ -0.83
VPS13B-206ENST00000496144 GAKO14976 1311 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 IGF2BP3O00425 579 aaKnown RBP eCLIP9.85□□□□□ -0.83
VPS13B-206ENST00000496144 CYP21A2P08686 494 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 HMGB1P09429 215 aaKnown RBP9.85□□□□□ -0.83
VPS13B-206ENST00000496144 DYNLL1P63167 89 aaKnown RBP9.85□□□□□ -0.83
VPS13B-206ENST00000496144 PXYLP1Q8TE99 480 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 WDR18Q9BV38 432 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 ATP11BQ9Y2G3 1177 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 RPTORQ8N122 1335 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 MCAMP43121 646 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 NASPP49321 788 aaPredicted RBP9.85□□□□□ -0.83
VPS13B-206ENST00000496144 STOX1Q6ZVD7 989 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 ESR2Q92731 530 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 EHD4Q9H223 541 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 PRKCZQ05513 592 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 SLFNL1Q499Z3 407 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 Q6ZUG5 572 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 NUP133Q8WUM0 1156 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 FAM184BQ9ULE4 1060 aa9.85□□□□□ -0.83
VPS13B-206ENST00000496144 ACTN1P12814 892 aa9.84□□□□□ -0.83
VPS13B-206ENST00000496144 GTF3C6Q969F1 213 aa9.84□□□□□ -0.83
VPS13B-206ENST00000496144 CHMP4CQ96CF2 233 aa9.84□□□□□ -0.83
VPS13B-206ENST00000496144 RTN4Q9NQC3 1192 aaKnown RBP9.84□□□□□ -0.83
VPS13B-206ENST00000496144 ZNF213O14771 459 aa9.84□□□□□ -0.83
VPS13B-206ENST00000496144 ERVK-9P63128 1117 aa9.84□□□□□ -0.83
VPS13B-206ENST00000496144 ERVK-24P63145 666 aa9.84□□□□□ -0.83
VPS13B-206ENST00000496144 CSPP1Q1MSJ5 1256 aa9.84□□□□□ -0.83
VPS13B-206ENST00000496144 SYAP1Q96A49 352 aaPredicted RBP9.84□□□□□ -0.83
VPS13B-206ENST00000496144 KRT23Q9C075 422 aa9.84□□□□□ -0.83
VPS13B-206ENST00000496144 HSPD1P10809 573 aaKnown RBP9.84□□□□□ -0.83
VPS13B-206ENST00000496144 PDE4DQ08499 809 aa9.84□□□□□ -0.83
VPS13B-206ENST00000496144 PCSK9Q8NBP7 692 aaKnown RBP9.84□□□□□ -0.83
VPS13B-206ENST00000496144 ZBED3Q96IU2 234 aaPredicted RBP9.84□□□□□ -0.83
VPS13B-206ENST00000496144 PPP1R9BQ96SB3 815 aa9.84□□□□□ -0.83
VPS13B-206ENST00000496144 CNNM2Q9H8M5 875 aa9.84□□□□□ -0.83
VPS13B-206ENST00000496144 CLIP2Q9UDT6 1046 aa9.84□□□□□ -0.83
VPS13B-206ENST00000496144 TRPM7Q96QT4 1865 aa9.84□□□□□ -0.83
VPS13B-206ENST00000496144 TESPA1A2RU30 521 aaPredicted RBP9.84□□□□□ -0.83
VPS13B-206ENST00000496144 RBSNQ9H1K0 784 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms